Haliotis rubra (blacklip abalone): 124277561
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Entry
124277561 CDS
T07967
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrj03009
]
124277561
Enzymes [BR:
hrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124277561
Ribosome biogenesis [BR:
hrj03009
]
Eukaryotic type
Pre-60S particles
Helicases
124277561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
124277561
NCBI-ProteinID:
XP_046569234
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MDVKWTSLSSLLSKETLSAIKALKFKRMTPVQAACIPQFLRNKDVAVEAVTGSGKTLAFL
LPLLEMLKKRETPLKKHEVGAVILTPTRELAIQIDEVLSHFLQYFSDFSSVLFIGGANVG
ANIDKFLAHGGNIVIATPGRMEDMFQRKQGAFNLAGSVKALEVLVLDEADRLLDMGFTAS
INTILSYLPKQRRTGLFSATQTDEVENLIRAGLRNPLRITVKEKLSTESESLQRTPLTLK
NYYMIVDADEKFNQLLHFLKEHKQEKVMVFFSTCASVDYFSRALQHILKKSQILYPWKNE
TETKQDILNFRQLTSGVLTCTDVMARGVDIPEVHWVIQFDPPSSASSFVHRCGRTARIGN
NGNALVMLLPAEDTYTTFISINQKVPMEQLEMAEEVHNYLPAVQKLAGKDRAIYEKGMRA
YVSFVQSYAKHECSVIFRVKDLDFGKLATGFGLLKIPKMPELKGKDIPNFHPAEINVDNI
PFRDKHREKQRQVRIESGELLQRHKKMKRPPKSVPWSRQKEKVEKKKKRVEKKLRAQKRK
LEEVQPTNDTEELDDLDSDLRLMKKLKKGKISNNEFNQEFVGSALNKLDSDSECDT
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaagtggacttcactatccagtcttttaagcaaggaaacattaagtgctatt
aaagctctcaagttcaaacggatgaccccagttcaggcagcatgtatcccgcagttcctg
cggaacaaagatgttgctgttgaggcagttacaggaagtgggaagacgctggcctttctt
ctccctctgctggaaatgttgaagaaaagagagactcccctgaagaaacatgaggtgggt
gcagtgatcctgacgccgacgcgagaactggccatacagatcgacgaggtcctctcccac
ttcctccaatacttctctgacttctcctcagtactcttcatagggggtgctaatgttggg
gctaatatcgacaagttcctcgcacatggaggtaatattgtgatagctacaccaggtcgg
atggaagacatgttccagaggaagcaaggcgcatttaacctggctggtagcgtcaaggcc
ctggaggtgcttgtcttggatgaagctgaccgactgctggacatgggatttacagccagc
atcaacactatcctgagttacctccccaaacagcggcggactggtctgttctcggccacc
cagacagatgaggtggagaatctgatccgagcagggctgaggaacccattgaggatcaca
gtgaaggagaagttgtcaacggagtctgagtcgctgcagaggacgccactgactctcaag
aactactacatgatcgtggatgcagacgagaagttcaaccagctgctccacttcctcaag
gaacacaagcaggagaaggtgatggtgttcttcagcacatgtgccagcgtggattacttc
tcccgtgccctccaacacattctaaagaagagccagattctctatccatggaaaaatgaa
acagaaacgaaacaagatattttgaatttccgacagcttaccagtggtgtgttgacctgt
actgacgtgatggctcgaggagtggacattcctgaagtacactgggtcatacagtttgac
cccccaagttcagccagttctttcgttcatcgatgtggtcgtacagctaggatcgggaac
aatggcaacgcccttgtgatgctgcttccggccgaggacacctacaccaccttcatcagc
atcaaccagaaggtgccaatggaacagctggagatggcagaggaggtacacaactacctg
cccgcggtacagaagctggctggcaaggacagggcaatatatgagaaggggatgagagcc
tatgtgtccttcgtccagtcctacgccaaacatgagtgtagcgtgatattcagggtcaaa
gatctcgactttggtaaactagctactggatttggtctcctgaaaattcctaaaatgcca
gaattaaaaggaaaagatattcccaactttcatccagcagagattaatgttgacaacatt
ccattcagagacaagcatcgggagaagcagcgccaggtgaggatcgagagtggggagctg
ctgcagaggcataaaaagatgaagaggccacccaaatccgtgccgtggtccagacagaag
gagaaggttgaaaagaagaagaagagagtggagaagaaactccgtgcacagaagaggaaa
ctggaggaagttcaaccaactaacgacactgaagagcttgatgacctagattctgacttg
cggctcatgaagaagttaaagaaagggaaaatatcaaataacgaattcaaccaggaattt
gtgggaagtgcattaaacaagttggacagtgactcggagtgtgacacatga
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