Haliotis rubra (blacklip abalone): 124277977
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Entry
124277977 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: RANBP2-like and GRIP domain-containing protein 8
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03013
Nucleocytoplasmic transport
hrj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124277977
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124277977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124277977
03110 Chaperones and folding catalysts [BR:
hrj03110
]
124277977
04121 Ubiquitin system [BR:
hrj04121
]
124277977
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124277977
Chaperones and folding catalysts [BR:
hrj03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
124277977
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
124277977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
WH1
TPR_2
TPR_1
TPR_8
TPR_7
TPR_11
TPR_16
TPR_CcmH_CycH
RPN7
TPR_12
Zn_ribbon_RanBP
DUF3245
Motif
Other DBs
NCBI-GeneID:
124277977
NCBI-ProteinID:
XP_046569664
LinkDB
All DBs
Position
Unknown
AA seq
2531 aa
AA seq
DB search
MFRTKQDVDRHAANVLGRIKNEKEKNSRGYQIARLYFDVSEYEIAKRYLSSFLSVRETVP
QAHKLMGHIFLKTNEKEKALECYKRALELDGTQKDLIIKICELCTQVAMDPERARFWLEK
AEQTCPGNDVIFRLREMIAQNSGDENFQELEKLITAELTQRPDDVSLRVKLLHLYLKSGR
LDHAYNVAVQTDRTMAFTDSLEWYETLLDVYYAYKGKNGCRGDLEFYTQFLHTVRNVVYL
RLCYRELIACAEILHQFDQVLQEAVQIPKQQDDWMSFLTEMTGQFFFSCGTLLLKRAQKG
VLSWKDVIPQASVCYLLNNSILTIDSRSEWFVSASMDKKSMYDHLHMISNFRQPGSFEGQ
GHTLHALGKGDTATWTQKLRQQYCTQQGREKLYDTLFTQPDMRAKKDSSYLMKNQIYEES
VLLFPTRPQMRSFDLGCYRLHPHSLTSFIWLALQRYSCKDKAQPYYGFDIFENCVYSVKN
MSVGGAESLCQLDTDVFLIASVRCAALRHQEMIHMGHTDPTQPDFLPLCLTKPLCSQEQA
DWWLAAYKFHTNTVKDNFSKMRHTLQRGIETVRLVASHGMSVNLIIHIARSLEVKATEMK
QLGSELTVKATDTETRAEFYWEQALEMLSRLEKNRNPPVPKHRLFKDDTDQDLDEAIIKV
LMSEVQYAVGCSAMKKHKHEEAINIFDKLHTPYASLNSAKIYKVLAEQERSRDAPVGREQ
HQILLTKARDAIFRTFDLLQGDKKHELNKSVQRLLDDVESQLQCVSEWDEDEEPSQYHTP
TAIQLDGDVSSPDHSTPREKSRTKSPAAQVSFNTSDASRHIRPSPEHMDAKIRSLAYSQE
SLVKMVLARNEELVKINSQLVEALRENREVITQLKSQLNLSQKYNYSSLSTPGPHMASPY
HPQYPPPQGMGPPQFGYQMPSPAGLPGYRPPSPRSRSRTNLMGHTGFIGKDESNVVEGDD
DDENPYFIDGEFFEESLAHPHGQYYVPDSHLEWPYGNRAGIEGSSTVTYAPQNRPPMPQS
GFFASSLRGQSIQYGQSNIATSMPGPGYFSSPHGLTTASAMNQTPSLYAAIMGKDSPHNI
GGIPAQIQSGVPSPAAQAIPQYLGQPAAPQPQPPPQHQPQPQPQPQPQPATTLASQMAQK
PIFTSGNFGAGVKTASTPLTKGTSSQAVPTPPQPFSQIPQAQAQNLVNRAVTSTISPSAS
TAEVVCIFQGKATYTSKIGAKQEGNVKVFFFGAEKGGRVRMETLSTNQIILNHDINTLKL
VASFTPTLVTWKRPQHDGKGEETVNLNFDNAELAQKLKSVLQKIQEAGKKSEASPPKPAV
ATPSPFTISGSQAFKPTTTQTPTGSSPAVFGQAQTGMPASAALAALSAKQGEEKTVHKSA
QAFAGFTFTQTKPMTQQAPVTVGPSSASAASSIFTLGQNIGSPMPSFSNLAANTSATGFS
GLKTTHDSPSKGEDEERVEEYEPNVDFKPVIDLPDLVEMKTGKKMRRSCLGEGXRLFRFD
ADTNQWKERGIGEVKILYNKAAKRXYLILMREQVLKICANHNITKDMKLHSMTSSDRAWC
WSAMDFAEEEMKMEKLAIKFKTPELACQFKECFEKYQNMLEDSPVKPIPEAIGSSEVAEK
KRTLRGKKSLADMFKPKTGSWECQGCYCVNKGEQLKCPACNTIKPGAEEEVKKAETAKPM
QVSPVEALKLVREDSRLVEQQEGRQNQLKVSQQILPLEASWQRCYSQMILSLRQLQHLQQ
LHPVFLTPKSSGFNFASAADSAKKDGGFQFNLGKVSTPVKNQEKKEIGSPFQFTFSLTPS
KTPQSKTTVTSPKSPEGDYYVNKEGEDSHIYFEPIVSLPDKVDVKTGEEEEVTRFEQRAK
LFRFSEGEWKERGLGTMKILEHKTSHRYRLLMRREQIFKVCCNHVITPELELKPMGSGDG
KSWVWYAKDFSEGEGKVEQLAIKFKNKEIADQFKKVFDDGKAGGEKGASAATEGDVSAKH
IEDVQFLYIEEATEEQKARARKYLLPESFYLYENKPPCPGCIGCEDYDPSKVNVPGKVKA
KSKSEETSPAPRTTSVKVSSSASSVAGSVGASEGFSMFGHASGMSFSTLAAQGDAVGFAF
KKDENRPFQWSGAGQQIFGSSPGGNRTNDGDDDEVAQGDDIDFKPIIELPELVEVKTGEE
GWEVVYCQRSKLFRFVRDSNQWKERAVGDMKILKQDDKYRMLMRRDQVHKVACNHLIAPN
MILSPMATSETAWCWTAQDYAENEAKIEQFALRFKTEELARQFKKKFEEVQELVRQTEAA
APAKNANNSATESKSQEVSVTEEEEDDDEDDDDDSEEESIVFEKRATLTYFEDDEWKKLG
MGNLKILYNEDLNGNQIDMDTDDKLKICNHIICREHSIRLEMPKRACMWSAQDFSTDEPV
KRNFKASFSSVAAAEEFAKSFMEGVSLARDSELSEQISHEMDTPVIFSHGDATGGQSRIL
VCQSEASSATSMGGSSQCETRIQPGYSEGSESAASSQTGEGVSATDATSVVSCSPELSAL
LSSFLEEDQKR
NT seq
7596 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaacgaagcaagacgtcgatagacatgctgcaaatgtgctgggaagaatcaag
aatgaaaaggagaaaaactcaagaggctaccagatagcaaggctgtattttgatgtgtct
gaatatgagattgctaaaaggtacctgtcatcattcctgagtgtgagggagacggtgcct
caggcacacaagctcatgggacatatcttccttaagacaaatgaaaaggaaaaggctttg
gaatgttacaagagggccctggagcttgatggcactcagaaagatttgatcatcaaaatt
tgtgagctgtgtacacaggtggcaatggatccagagcgagctcggttctggctggagaag
gcagagcaaacctgccccggaaatgatgttatcttcagactgagggagatgatagcccag
aacagcggtgatgaaaacttccaggaacttgaaaagctcatcacagcagaattgacacaa
cgcccagacgatgtaagtctacgagtgaagctgctacacttgtacctgaagtcagggagg
cttgaccatgcttacaatgtggctgtccagactgaccgcaccatggctttcacagacagt
ctggagtggtatgaaactcttctggatgtctactatgcgtacaaagggaagaatggttgc
cgtggagaccttgagttctatactcagttcctgcacactgtgaggaatgttgtgtacctg
cgtctttgttacagagaacttattgcttgtgctgagattctacaccagtttgaccaagtg
cttcaggaagctgtacagattcctaagcagcaggatgactggatgtcattcctaactgag
atgaccggccagttcttcttctcctgtggcacactgttgctgaaaagagcccagaagggt
gtactgtcgtggaaggatgtgatcccccaggcttcagtgtgctatcttcttaacaactcc
atcctcaccatagactcacgatctgagtggtttgtgtcagccagcatggacaagaaaagc
atgtatgatcatctgcacatgatcagcaacttccggcagccagggagttttgaaggtcaa
ggccacaccctacatgcactgggtaaaggagacacggcaacatggactcagaaactgaga
cagcaatattgcacacaacaaggtcgagagaagctttacgacaccctctttacccagccg
gatatgagagcaaagaaagatagttcctacctgatgaagaaccagatctacgaggaaagt
gtactcttgtttcccacccggccccagatgcgatcctttgacttaggctgctacaggctc
cacccacacagtcttaccagcttcatttggctagcactccaacggtactcctgtaaagac
aaggctcagccttactacggctttgacatctttgagaattgtgtgtacagtgttaaaaac
atgtctgttggtggggccgagtccctgtgtcagctggacacagatgtgtttctgattgct
tcagttcgctgtgcagcattgagacaccaggagatgattcacatgggtcacactgacccc
acacagccggactttctacccctgtgtctgacaaaaccactttgttctcaggagcaggca
gactggtggctggcagcttataaattccatacaaacacagtcaaggacaacttttccaag
atgcgtcacaccctgcagagagggatagaaactgtccgtctagtggctagtcacgggatg
tccgtcaacctgatcatccacatagccagatcactagaggtgaaggccacggagatgaag
cagttggggtcggagttgacagtgaaggcaactgacactgagaccagagcagagttctac
tgggagcaggcactggaaatgttgagccgactcgaaaagaaccggaaccccccagtgcca
aagcaccgactgttcaaggatgacacagaccaggacctggatgaagccatcatcaaagtg
ctgatgtccgaggtccagtatgccgttggttgttcagccatgaagaagcacaagcatgag
gaagctatcaacatatttgacaaactacacacaccatatgcttcactcaactcagcaaag
atatacaaggttctagcagagcaggagcgatctcgggacgctcctgtaggacgggaacaa
caccagattctcttaacaaaagctcgggatgccattttccgtacttttgaccttctgcaa
ggagataagaaacacgaactgaacaagtcagtgcagcggcttctggatgatgttgagtca
cagttgcagtgtgtgtcagagtgggatgaggatgaggagccaagtcagtatcacactcct
acagccatccagctggatggagacgtgtcatcccctgaccacagcacgcccagggagaaa
tccaggaccaagtctccagcagctcaagtcagcttcaacacatctgatgctagccgacac
atccgaccaagtccagagcacatggatgccaagatccgctccttggcctactcccaagag
tccttggttaagatggtgcttgcccgcaatgaggagctggtcaagatcaacagccagctt
gtggaggccctgagggagaacagggaggttatcacacagcttaagtcccaacttaacttg
agccagaagtacaactactccagcctgtctaccccaggacctcacatggcctcaccctac
catcctcaatacccccctcctcaaggaatgggtccacctcagtttggataccagatgcct
agtccagcaggcttacctggctacagacctccatcccctcgttcacgcagtaggaccaat
ctcatgggacacactggcttcataggcaaggatgagtccaatgttgttgaaggggatgat
gatgatgaaaatccttacttcatcgatggagagttctttgaggaaagtttagcccaccct
catgggcagtattatgtgccagactcacatcttgaatggccgtatggaaacagggcgggc
attgagggaagttccacagtaacctatgcaccccagaacagacctccgatgcctcaaagt
ggcttctttgcctcatctctgaggggacagtcgatacagtatggtcaatctaacatagct
acatcgatgccaggtccaggatacttttcctcaccccatggccttactacagcatctgca
atgaaccagacaccttccttatatgctgccatcatgggcaaggattctcctcacaacata
ggaggaatacctgcacagattcagtcaggagtaccaagtcctgctgctcaagctattcct
cagtatctgggccagccagcagcaccacagccccagcctccacctcagcatcaacctcaa
cctcaacctcaacctcagcctcagcctgctacaacccttgcatcacagatggctcagaag
ccaatcttcacatcaggaaacttcggggctggtgttaagactgcttcaacacctcttacc
aaggggactagttctcaggcagtccctactccacctcaaccttttagtcagataccacaa
gcgcaggctcagaatcttgttaacagggctgtgacatcaaccatttcccccagtgcgtcc
actgctgaagttgtttgcattttccaaggaaaagcaacctacacatcgaagattggtgcc
aagcaggaaggaaatgtcaaagtgtttttcttcggtgccgagaagggtggtcgggtgagg
atggagactctatcaacaaaccagattattctcaaccatgatatcaatacactgaagctg
gtggcatccttcaccccaacgctagtcacatggaagagaccccagcatgacgggaaggga
gaggagactgttaacctgaattttgataatgctgaactagctcagaaattgaagtcagtt
cttcagaaaatccaggaagctggcaagaagtctgaagcttcacctccaaaaccagctgtg
gcaactccatcaccattcaccatatcagggtctcaggcctttaaacctactacgacacag
acccctactggatcttcacctgcagtgtttggccaggctcagacaggaatgcctgcatca
gctgcccttgcagccctgtctgccaaacaaggagaggagaagactgtccacaaatcagcc
caagcctttgctgggtttacctttacacaaaccaaacccatgactcaacaagctccagtt
acagttggaccctcatctgcttcagctgctagctctattttcactcttggacaaaacatt
ggaagccccatgcctagtttttctaatcttgctgccaatacttcagcaacaggattctct
ggattaaagacaacccatgactccccaagcaagggagaagatgaggaaagggttgaggaa
tatgaacccaatgtggactttaagccagttattgatctgccagacttagtggaaatgaag
acagggaagaagatgaggagaagttgtttgggagagggcnncaggctgtttaggtttgat
gctgataccaatcagtggaaggaaaggggcattggtgaggtaaagattctgtacaataag
gctgccaaacgctaatacctaattctgatgagagagcaagttttgaagatttgtgctaat
cacaacataacaaaagacatgaaactgcactcaatgaccagctctgacagagcttggtgt
tggtctgcaatggactttgcagaggaggaaatgaaaatggaaaaattggccatcaagttc
aagactccagaactggcttgtcaattcaaagaatgttttgagaaataccaaaatatgtta
gaagactcaccagtaaaaccaatacctgaagctataggaagcagtgaggtagctgagaaa
aagaggaccctaaggggaaagaagtctttagcagacatgttcaagcctaaaactggaagc
tgggaatgtcaaggatgctactgtgtgaacaagggtgagcagctgaaatgtccagcatgc
aatacaatcaagccaggtgctgaagaggaagttaagaaagcagaaacagccaaacccatg
caggtatctccagtggaggctttaaaattggtgagggaggattccagattggtggagcag
caggaggggaggcaaaaccagctaaaagtgagccagcagattctaccactggaggcctcc
tggcagagatgctacagtcaaatgatcctcagcctaagacaactgcagcatcttcagcag
ctacatccggttttccttactcccaaatcatcaggattcaactttgcttctgcagctgat
tctgccaagaaggatggaggcttccagttcaatcttggaaaggtctcaactccagtcaag
aaccaagaaaagaaagaaatcggctccccatttcagttcaccttcagccttaccccatca
aagactcctcaatccaagaccactgtgacatcacccaagtctccagagggggactactat
gtcaataaggaaggagaggactcccacatctattttgaacctattgtgtctttacctgac
aaagtggatgtgaagactggggaagaggaggaagttacccggtttgaacagagggcaaaa
ctcttcaggttcagtgagggtgagtggaaggagagaggtcttggcactatgaagattctg
gaacacaaaacttcccaccgctaccgacttctgatgaggcgagaacagatcttcaaagtg
tgctgcaatcatgtgattacccctgaactggaactcaagccaatgggctcaggtgatgga
aagtcatgggtttggtatgccaaggacttctctgagggagagggcaaggtggaacaacta
gctattaagtttaagaacaaggagatagctgaccagtttaagaaagtgttcgatgatgga
aaagctggtggtgaaaaaggtgcctctgcagctactgaaggggatgtgtcagccaagcac
attgaggatgtgcagttcctgtatattgaggaggcaacagaggaacagaaggccagagcc
agaaagtacctgctgccagagtcattctacctctatgaaaacaaacccccctgtccgggc
tgtattggctgcgaggactatgaccccagtaaagtcaatgttcccggcaaggtcaaagca
aaatcaaaatctgaggagacaagtccagcacctagaacaacttcagttaaagtgtcaagc
agtgccagcagtgttgcaggcagtgttggtgccagtgaagggttctctatgttcggtcac
gcttcagggatgtccttctctaccctagctgcacagggggatgcagttggatttgctttc
aagaaagatgaaaacagaccattccagtggtcaggagcaggtcaacagatctttgggtca
tctccaggtggcaacaggaccaatgatggtgatgatgatgaggttgcgcagggtgatgac
attgactttaaacccatcattgaacttccagaactagttgaagtcaaaacaggtgaagaa
ggctgggaggtggtgtactgtcagaggtcgaagttgttccgatttgtgcgcgattccaac
cagtggaaggagagagctgtgggagacatgaagatcctcaaacaagatgacaaatatcga
atgctgatgaggcgagatcaagtacataaagtggcctgtaatcatctgatagctcccaac
atgatcctgtctcccatggcaacatcagagacagcctggtgctggactgctcaagactat
gctgaaaacgaggcaaagattgaacagtttgccctcaggttcaagacggaagagctggcc
agacagttcaagaagaagtttgaagaggttcaggagctggtcagacaaacagaagctgca
gccccagctaagaatgccaacaactcggcaactgagtccaaaagtcaggaagtctctgtg
acagaggaagaagaagatgatgacgaggatgatgatgatgattctgaggaagaaagcatt
gtgtttgagaagagagctacgttgacatattttgaggatgatgagtggaagaaacttgga
atgggcaacctgaagatcctgtacaatgaagatctgaatggaaaccaaattgacatggac
acagatgacaaattaaaaatctgcaaccatatcatttgccgggaacactcaataagacta
gagatgccgaagagagcatgtatgtggagtgcccaagacttctcaacagatgagccagtc
aagaggaacttcaaggcatctttcagctcagtagctgctgcggaggagtttgctaaatct
tttatggagggtgtgagcttggcccgagattctgagttgtccgagcagatttcacatgaa
atggataccccagttatattttctcatggtgatgccacaggaggtcaatcccgaatcctt
gtttgtcaatccgaagcaagctctgcaacctcaatgggtggcagtagccaatgtgagacg
aggatacagccaggttatagtgagggcagcgaatcagcagcctcatcacaaacaggggag
ggtgtgtcagccactgatgctacctctgttgtttcatgttcgcctgagctgtctgctctc
ttaagttcattcttagaggaagaccagaaaagatga
DBGET
integrated database retrieval system
