Haliotis rubra (blacklip abalone): 124278055
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Entry
124278055 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 2
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124278055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124278055
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124278055
Enzymes [BR:
hrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124278055
Messenger RNA biogenesis [BR:
hrj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
124278055
DNA repair and recombination proteins [BR:
hrj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
124278055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
DEAD_2
Motif
Other DBs
NCBI-GeneID:
124278055
NCBI-ProteinID:
XP_046569758
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MAIPPNFETSLNYAKHKLNINFELKDQQLSTLRHLYEGNDCIAVLPTGYGKSVIFQLLPW
LLQKDLSVPGMIIVVCPLNSLMQDQVMSLCDRGIKACFLNSQGTAGKTYKMISRQIDVET
LEEEDDNDQDEVDATENDIHAPTYVKMKELQQGQFNIIYAHPETLLNNKTVGRLLRSPLF
QEKVCVVVVDEVHMISEWGPKFRTAFKKLSEVICIFPNAAHLALTATATPQAIKELVADL
QIVDFKTIRINPDRVNIFLEIQTRLPNIRKQEKLDNLIQPLAEDLCDRLAEFPLTVVYIN
NDEALGYCYQYVARHLKEKAYIPKESPIPENRIFAQYHKAYTDEMKTHIVSELRKYKPKI
RLVLATVALGMGLNAPSIXRVIHFQXPTTLEKYFQEIGRAGRDGKKSSAQLFYNKNDIAK
NREDMSEAMIKYCTNRTTCLRLQLVSYFGFDSVMFSDNPADCCINCRTTKTGM
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctataccgccaaactttgagacttcgctaaactatgcaaagcacaaattaaacatt
aactttgagctaaaggatcagcaactttcaacattaagacatctttacgaagggaatgac
tgtatagctgttttgcctacgggatatggcaaaagtgttatatttcaacttttaccatgg
ctgctgcaaaaggatctgtcagttccagggatgatcatcgttgtgtgtccacttaattcc
ttgatgcaggaccaggttatgtcattgtgtgaccgagggatcaaagcctgtttccttaat
tcacaaggtactgctggcaagacatacaagatgatctcacgccagattgatgtggagacg
ctagaagaagaggacgacaatgatcaagatgaagttgatgcaactgaaaatgacattcat
gcaccaacttatgtcaagatgaaagaactgcagcagggacaattcaacatcatctatgct
catccagagactcttctaaacaacaagacagttggacgtctactcagatctccacttttc
caagaaaaagtctgcgttgttgttgttgatgaagtgcacatgatatccgaatgggggcca
aaattcagaacagcattcaaaaaattatcagaggttatctgcatttttccaaatgctgct
catctggcactgactgcaactgctacccctcaagccattaaagaacttgttgcagatctt
cagattgtcgactttaagacgatcagaataaaccctgatcgggtgaacatttttctggaa
attcaaactcgtctgccaaatatcaggaaacaagaaaaattagacaacctaattcaacca
cttgctgaagacctgtgtgatcgtctggctgagttccctcttacagttgtttacatcaac
aatgatgaggcactgggatattgctatcagtacgtagcaagacatctaaaggaaaaggca
tacattcctaaagaatcaccaattccagaaaaccggatttttgctcagtaccacaaggca
tacacagatgaaatgaaaacacacattgtgtctgaactgaggaaatacaaaccaaaaatt
aggttggtcctggccactgttgccttaggcatgggtctgaatgcacctagcatctgacgt
gtaatccattttcaancccctacaacccttgagaagtatttccaggaaataggtcgggca
ggacgagacggcaaaaagtccagtgcccaactattttacaacaagaatgacattgcaaag
aatcgtgaggatatgtcagaggcaatgatcaagtactgcacaaacaggaccacttgcttg
aggttacagcttgtttcatattttggtttcgattcagtcatgttttcggataacccagct
gattgttgtattaactgcaggacaactaagacaggaatgtga
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