Haliotis rubra (blacklip abalone): 124279147
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Entry
124279147 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124279147
Enzymes [BR:
hrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124279147
DNA repair and recombination proteins [BR:
hrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
124279147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_22
Motif
Other DBs
NCBI-GeneID:
124279147
NCBI-ProteinID:
XP_046570905
LinkDB
All DBs
Position
Unknown
AA seq
2199 aa
AA seq
DB search
MVSLPRLTGALRVFTSVSASEVPGARGNDDLAQRRLLSAEKENKGGHSWQDVVTLLEKRG
DVETKESSPVLKQLIACARSIVGNEASSDIVEGAAAYLFEIFKFAESVGQRETTTLRSIF
GPFPATAATKACELVSRIVSWLPGGVLLEERFPPVERKQTGSHYPKLGKISNSXLNVRSR
RKSYPSSESEDEVEEKNVDLKYNAKPVLGKKVPDGGAARLEDRCDSSWLLEEVRKYFSSS
GETDIGLSLEDLSTTIFEVLCSTKTDEELQNELFELLGFDRFEMIQSLLSNRSRLMKTLV
ADTNRAAIAQVQAQRKKEVERPTYGCQVTIQSEEEKQLMKQIRREEKKLSKRDGKKVEEE
GKKAFNPIEMRAQREAALQVASNRPLFTGSSKSYQRERYPFVFDSYEEARQSSAYVGGNK
MVLPQGFNRNDNKDYEEVSVPPNESAPIDVGQRLVPVNELDEIGQLAFRGMKNLNRIQSV
VFEAAFKTNENLLICAPTGAGKTNIAMLTILHELNLHLSQGVIKKDEFKIVYVAPMKALA
AEMVRNFGGRLEPLGITVRELTGDMSLTKAEILKTQMLVTTPEKWDVVTRKSTGDVALAQ
LVKLLIIDEVHLLHDDRGPVIESLVARTIRQVESTQSMIRIVGLSATLPNYIDVARFLNV
NPYLGLFFFDGRFRPVPLGQTFIGVKATNRVQQMMEFNNVCYEKVVAQVKAGYQVMVFVH
ARNETVRTAMMLRDYSKNRGQSQLFLADQDRSYGEAQKNLQRSRNKQLKDLFPDGFSMHH
AGMLRQDRNLVERYFSGGHIKVLVCTATLAWGVNLPAHAVIIKGTQLYDAKRGSFVDLGI
LDVMQIFGRAGRPQFDKFGHGTIITTHDKLSHYLSLMTRQNPIESQFINSLTDNLNAEVA
LGTVTNMEEAVKWLSYTYLYVRMRINPLAYGIPYGVVQDDPSLEVHRRDLITEAGRKLDK
AMMVRFDERTSYFSSTDLGRIASHFYIKYDTMETINEFFKPHMAEPEVFNILAKSQEFEQ
IKVREDEMDELDNLMFDACEMPVAGGKENPNGKVNILLQTYVSRHGLESFXLISDMSYVA
QNASRIMRALFEMALKKGWPVMAGRLLALSKVVDKRLWAHEHPLRQFPILSQEILNKIEA
RNLYIDRLKDMDAKEIGHIVHHVRMGAIIKRCVNQIPALILDASIQPITRTVLRVRLTIT
ADFSWDDKVHGSVTEPFWVWVEDPDNNHIYHSDYFLLHKKHVVKDEPQSLVFTIPIFEPL
PTQYYIRAVSDRWLGSEAVFPISFQHLILPERHPPHTELLDLQPLPVTALKNPQYEALYR
FTHFNPIQTQIFHTVYHNDCNVLLGAPTGSGKTVAAELAIFRIFNQYPKHKAVYIAPLKA
LVRERMDDWKVRIEQKLGKKVVELTGDVTPDMRAVANADLIVTTPEKWDGVSRSWQTRSY
VKSVALLVIDEIHLLGDDRGPVLEVIVSRTNFISSTTMTKVRVVGLSTALANARDLADWL
AIKQMGLFNFRPSVRPVPLEVHINGFPGQHYCPRMATMNKPTFQAVKTHSPEKPVLVFVS
SRRQTRLTALDLIAFLAAEDNPKQWLHMAEMEMENIISGVKETNLKLTLAFGIGIHHAGL
VERDRKICEELFVNQKIQVLIATSTLAWGVNFPAHLVVVKGTEYFDGKTCRYVDFPITDV
LQMMGRAGRPQFDDQGKAVILVHDIKKHFYKKFLYEPFPVESNLLEVLPDHLNAEVVAGT
IASKQDAMDYITWTYFFRRLVMNPSYYKLDNTEQDIINKYLSGLVEKALMELECSYCLQV
GEDNRSVTPLTLGRISSYYYLNHNTVRMFCNELKAESTLPELLDILSNAHEYAELPVRHN
EDQINSDLAQKVPLAVNPHSYDSAHTKTHILLQAHFSQMQLPSTDYYTDTKSVLDQAIRI
LQAMLDVSADQGWLATSLRVIQLIQMVVQGRWLEDSTLLTLPNIMPYHVYCFRPRGGGAR
QKGFPELRGPIETLPELVAVCDGKFEALAAMLSGEMNQTEIDQVYLVLSRLPQISVSITV
KGFWEGSKGKQEERLVNLSVTGGRRQDSDWIKVHADQEYVLQVELARVNKTRKNDSKAHS
PRFPKPKDEGWVLVVGEVETKELIALKRMGYVRSRSKAQLALYTPETVGRVIYTLYLMSD
SYLGLDQQYDICLDVVPSNIETQVNTELKEELDGLEFDS
NT seq
6600 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcttgcctcgccttactggcgctcttcgagtgttcaccagtgtttcggccagt
gaggttccgggggcgagaggtaatgatgacctggcacagcggaggctgctgtcagcagag
aaagaaaacaagggaggtcactcctggcaagatgtggtgactctactggagaagcgtgga
gatgtagaaactaaagagtcatctcctgtcctcaaacaactgattgcctgcgctagatct
attgtcggtaatgaagcatcctccgacatcgtggagggggctgcagcttacctgtttgaa
attttcaagtttgcggagagtgttggtcagagagagaccacaacactgagaagcatcttt
ggcccattcccagccaccgcagcaaccaaagcatgtgagctggtctcccggatcgtgtcg
tggttgccaggaggcgtcctcctggaggagcgatttccaccggtcgagaggaagcagacg
ggcagccattatccaaaattaggaaaaatatcaaattcttaactcaacgttagatcgaga
agaaagagttatccaagctcagaatctgaagatgaagtggaagagaaaaatgtggatttg
aaatataatgcgaagccagtgttaggaaagaaggtaccagacggcggagctgcgagactg
gaggacaggtgcgactcatcatggctgctggaggaagtgaggaagtacttctcctcctct
ggggaaacggacattgggcttagtctagaggacctctccaccaccatcttcgaggttctt
tgttccaccaagacggacgaggagttacagaatgagctatttgagcttcttggttttgac
cgttttgagatgattcaaagcctgctgtcgaacaggagtcgcctgatgaagacccttgtt
gctgacactaacagagcagctatagcacaagtacaggcccagcgaaagaaagaagtggaa
agaccaacctatggttgccaggttacaatacagtcagaggaagagaagcagctgatgaag
cagatacgtagggaggagaagaaactgtccaagcgggacgggaagaaagtggaggaagag
gggaagaaagccttcaaccctatagagatgcgtgcccagagggaggcggcgctgcaggtg
gcctccaaccgtccgctgttcacaggcagcagcaagtcctaccagcgagagagataccca
tttgtgtttgactcttatgaggaggcaagacagtcgtcagcatatgttggagggaacaag
atggtgctgccccaaggattcaaccgcaatgacaacaaggactatgaggaggtgtctgtt
ccccccaatgaatccgcccccatagatgtggggcagagacttgtacctgtcaacgagctg
gatgagattggacagctggcattccggggaatgaagaacttgaaccgcatccaatctgtg
gtgttcgaagctgccttcaagaccaatgaaaacctgctgatctgtgccccaactggcgcc
ggtaaaaccaacattgccatgttaaccatcctgcatgagctgaatctgcacctgtctcag
ggcgtcatcaagaaagatgagttcaagattgtgtatgtcgctccaatgaaagctctggca
gcagagatggtgcgaaactttggtggccgcctggagccactaggcatcacagtacgggaa
ctgacaggggacatgtccctcacaaaggccgagatcctgaaaacacagatgctggtgacg
accccagaaaagtgggatgtggtgacaaggaagagtacaggtgatgtggccctggctcag
cttgtgaagctgctcatcattgacgaggttcacctgcttcacgacgaccgtggtccagtc
atcgagagtctagtggccaggaccatccgacaggtggagagtacacagagtatgatccgt
atcgtgggactgtcggcaacactgcccaactacatcgacgtggccaggttcctcaatgtt
aacccctaccttggactcttcttcttcgatggaaggttcagacctgtgcccctcggccag
accttcataggtgtaaaggccaccaaccgagtgcagcagatgatggagttcaacaacgtc
tgctatgagaaggtggtggcccaggtcaaggccggctaccaggtgatggtgttcgtccac
gcccgtaatgagacagtgcggacagccatgatgttgcgagactactccaagaacagaggt
caatcccagctgttcctcgctgaccaggatcgttcatatggcgaggctcagaagaatttg
cagaggtcacggaacaagcagttgaaggatctgttcccggacggcttcagcatgcatcat
gccgggatgctgcgccaggaccgaaacctggtagagcggtacttcagtggtggccacatc
aaggtgttggtgtgtacagcaaccctggcctggggtgtcaatctgcccgcccatgctgtc
atcatcaagggcacgcaactgtacgatgcgaagcgaggctccttcgtggacctgggcatc
cttgacgtgatgcagatattcggtcgtgctggtcggccccagtttgacaagtttggtcat
ggcacaatcatcacaacccacgacaagctgagccactatctctccctgatgacaagacag
aatccaattgagagccagttcatcaacagcctcacagacaatctgaatgctgaggttgca
ctcggtacagtaaccaacatggaggaggccgtcaagtggctcagctacacatacctgtac
gtccggatgaggatcaaccctctggcttacggcatcccctacggtgttgtccaggatgac
ccaagcttggaggtccaccggcgcgacctcatcacagaagcaggacgcaagctggacaaa
gccatgatggtcagatttgatgagaggacgtcctacttctcctccactgacctgggtcgc
attgccagccatttctacatcaagtacgacacaatggagacaatcaacgagttcttcaaa
cctcacatggcagaaccagaggtgtttaacatattggccaagtcccaggagtttgaacaa
atcaaggtccgtgaggatgagatggatgagctggacaacctgatgttcgatgcctgtgag
atgccagtggcaggggggaaagaaaatcccaacgggaaagtcaacatcttgctacagaca
tacgtctccaggcacggactggagtctttcnntctcatctctgacatgtcatatgttgct
cagaatgcctccaggatcatgcgagctctgtttgagatggcgctgaagaagggttggcca
gtgatggcaggtcggctgttggcactcagcaaggtggtggacaagaggctgtgggcacac
gaacacccactgcgacagttccccattctctcccaggaaatcctcaacaagattgaagcc
aggaacctttacatagaccgactgaaagacatggatgccaaggaaataggccacatagtc
caccacgtcaggatgggggccatcatcaagagatgtgtcaaccagattcctgcactcatt
ctggacgcaagcatacaaccaatcacccgcactgttctcagagtgaggctcaccatcact
gctgacttcagctgggatgataaggttcatggcagcgtaacggagccattctgggtgtgg
gtggaggaccctgacaataaccacatctaccattctgactacttcctgctccacaagaaa
catgttgtgaaggatgaaccccagagcttggtgttcaccataccgatcttcgagccgctg
ccaacccagtactacataagggcagtgtcagaccggtggctcgggtcagaggctgtcttt
cccatctccttccaacacctcatcctgccggagagacatcctcctcacacagagctgctc
gacctgcagcccctgccagtgacagccctgaagaacccccagtatgaagccctgtatcgc
ttcactcacttcaaccccatccagacccagatattccacacagtgtaccacaatgactgc
aacgtgttgcttggggcacccactggttccgggaagacagttgctgctgagttggcaata
ttccggatattcaaccagtaccccaaacataaggcagtgtatattgctcctctgaaggct
ctggtccgagagaggatggatgattggaaggtcaggatagagcagaagctgggcaagaaa
gtggtggagttgaccggagatgtaacaccagacatgcgagctgtggccaatgctgacctg
atagtgacaacaccggagaaatgggatggagtgagtcggtcgtggcagactcggagctac
gtcaagtctgtagccctgctggtcatcgatgaaatccacctgcttggtgatgatcgaggt
cctgttctggaggtcattgtctctcggacaaacttcatctccagcaccaccatgaccaag
gttcgagttgttggcctctccacagctctggccaatgcacgagaccttgcagactggttg
gccattaaacagatgggtctgttcaacttccgtccatctgtccgtcctgttccacttgag
gttcacatcaatggtttcccaggacaacactactgtccccgcatggcgaccatgaacaaa
cccacattccaggctgtgaagacccactcccctgagaagccagtgttggtgtttgtgtcg
tcccgtcgccagacacgcctcactgcccttgatctcattgccttccttgctgccgaggac
aaccctaagcagtggctgcacatggctgagatggagatggagaacatcatcagtggagtc
aaagagacaaatttaaaactgacgttggcttttgggatcggcatccatcatgcagggctg
gttgagagagatcgcaagatctgtgaggagctctttgtgaatcagaagatacaggtcctc
atagcaaccagtaccttagcttggggagtcaacttccctgcgcatctggtggttgtcaag
ggaaccgagtactttgatgggaagacctgcagatatgttgatttccccatcacagacgtc
cttcagatgatggggcgagccggccggccgcagtttgatgaccagggcaaggcggtcatc
ttggttcatgacatcaagaaacatttctacaagaagttcctctatgaaccattccctgtt
gaatccaatttactggaagtactacctgaccatcttaatgccgaggttgttgccgggacg
attgcatcgaaacaggatgccatggactatatcacgtggacgtacttcttcaggaggctg
gtgatgaacccaagttactacaagttggacaatacagagcaggacatcatcaacaagtac
ctgtctggtttggtagaaaaggctctgatggaactagaatgttcttactgtctgcaggtt
ggcgaggataaccgcagtgttacgccgctgaccctgggccgcatctcctcctactactac
ctgaaccacaacactgtacgtatgttctgtaatgaactcaaggctgaatcaacactgcca
gagctcttggatattttgtcgaatgcccacgagtatgccgagctcccagtccgccataat
gaagaccagatcaacagtgacttggcccagaaggttcccctggcagtgaaccctcactca
tacgactcggcccacaccaagacccacatcctgctgcaggctcacttctcccagatgcag
ctgccgtcaaccgactactacactgacacaaagtctgtgctggaccaagccattaggatc
ctccaggccatgttggatgtgtcggcagaccagggctggttggcaacatcactgcgggtg
attcagttgatacagatggtggtgcaaggtcgatggcttgaggactccacccttctcact
ctccctaacatcatgccctaccacgtgtactgtttcaggccccgagggggaggtgccaga
cagaaaggtttcccggagctgcgaggaccaatcgagactctcccagagcttgtggcagtt
tgtgatgggaagtttgaggccctggctgccatgttgagtggtgagatgaaccaaacggag
attgatcaggtgtacctggtattgagtcgtctgcctcaaatcagtgtctccatcacagtc
aagggattctgggaagggtcaaagggcaagcaggaggagagattggtcaatctatccgtt
acaggtgggcggcggcaagactcggactggatcaaggtccatgctgaccaggaatatgtc
cttcaggtcgaactggccagagtcaacaagacccggaagaatgacagcaaggcgcacagt
ccacggttcccgaagcccaaggatgaaggctgggttcttgtggtcggcgaggtggagacc
aaggaactcatcgcactcaagcggatggggtacgtgcggagtcgctccaaggcccaactt
gctctgtacacaccggagacggtgggacgtgtcatctacaccctctacctgatgagtgac
tcctaccttgggcttgaccagcagtacgacatctgcctggatgttgtgccatccaacatc
gagacacaggtcaacactgagctcaaggaggaactggatggtcttgagtttgatagctga
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integrated database retrieval system
