Haliotis rubra (blacklip abalone): 124279266
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Entry
124279266 CDS
T07967
Name
(RefSeq) ligand-gated ion channel 4-like
KO
K05312
nicotinic acetylcholine receptor, invertebrate
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrj04040
]
124279266
Ion channels [BR:
hrj04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
124279266
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
MASE9
DUF2417
Motif
Other DBs
NCBI-GeneID:
124279266
NCBI-ProteinID:
XP_046571045
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MMHVKLTRMFTNGFIPTCMIIGGMLALVACSEQEYRLVRDILKTYDKRIKPFVNGSGALN
VTMGVALAQIIDIDEKNQIMTTNCWINQGWIDKKLAWVPEKYGNISVIRIPYDSIWLPDI
VLYNTAEVTSKEMSSVSTNVIVTSDGNVTYLSMVIYKSSCSIDVKHFPFDEQNCSMEFSS
WTYDATSLNIMNVGEEGDTSNYIPSTEWHLVKYVQTRDPVLFSCCPEPYIFMKYFVLIKR
RPLFYLFNMVMPCLLITMVALLGFYMPNDSGEKISMGITTLLSMTVFLMIVAEQMPPTSD
LLPLIGLYYGITIAIVSFATGMTVLTLNIHHKGARGQEIPRVVKIIFFNYLAKMMFIKID
LAESHSAPIGMHQVPTTDYYDVYDADKLPKNGGLSPRFSRKLPTGGATSGGDSTERQFMR
VLQKVYQTIEKNEMRLAEQDRRDQLKLEWQQLALVLDRLLMTIFIIVTGCTTAGIFLPSP
HSTAFGNPF
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatgtaaaacttaccaggatgttcacgaatggcttcatcccgacatgcatgatt
atcggaggaatgctggcactggtggcttgcagtgagcaggaataccgactagtccgagac
attctgaagacctacgacaagaggattaaacccttcgtcaacggctcgggtgctttgaac
gtcacaatgggcgtggccctggcccagattattgacatagatgaaaagaatcaaattatg
acaacaaattgctggataaatcagggttggattgacaaaaagttggcctgggtaccagag
aaatatggaaacatcagcgtaataagaattccatatgattcaatatggctgccggatata
gtactgtacaatacggcggaagtgacaagtaaggaaatgtcaagcgtcagcaccaatgtc
atcgtgacgtcagacggcaacgtgacgtatctgtcaatggtcatctacaaaagctcctgc
tccatcgacgtcaaacacttccccttcgacgaacaaaactgcagtatggagttctcgtcg
tggacgtacgacgcgacgtctctgaacatcatgaacgtcggcgaggagggagacacgtcg
aactacatccccagcacggagtggcacctggtcaaatatgtccagacccgtgaccctgtg
ttgttttcctgttgtccggagccgtacatcttcatgaaatattttgtcctcatcaaacgg
aggccgctgttttacttgttcaacatggtgatgccttgcctcctcatcacgatggttgct
ctgctgggattctatatgccgaacgactctggggagaaaatttcaatgggaataaccacg
ctgctatcaatgacagtgtttttgatgattgtagccgaacagatgcccccgacatcggat
ttattacctttaattggtctgtactatgggattactatagcgatagtgtcgttcgctacc
ggcatgacggtgttaacgctcaacatccaccataaaggagcacggggccaggagattcca
cgggttgtcaagatcatattttttaattatctcgccaaaatgatgtttattaagatagac
ctagcggagtcacacagtgcccctattgggatgcatcaagttccaacaacagattactat
gatgtgtatgatgcagataaactgccgaaaaatggcggcctttctccgcggttctcccgg
aagttgcccacagggggcgctacatccggcggtgacagcacggaaagacagttcatgcgg
gttctacaaaaggtgtaccagacaatagagaaaaacgaaatgcgattggctgagcaagac
aggcgtgatcagctaaagttggaatggcaacagttggctctggttttggatcgtcttcta
atgacaatatttatcattgtcaccggatgtacgactgcaggaatattccttccctctccc
cactcaacagcgtttggaaatccattctga
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