KEGG   Haliotis rubra (blacklip abalone): 124279412
Entry
124279412         CDS       T07967                                 
Name
(RefSeq) symplekin-like
  KO
K06100  symplekin
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124279412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hrj03021]
    124279412
   03019 Messenger RNA biogenesis [BR:hrj03019]
    124279412
Transcription machinery [BR:hrj03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     124279412
Messenger RNA biogenesis [BR:hrj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     124279412
    U7-dependent histone pre-mRNA processing factors
     124279412
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N
Other DBs
NCBI-GeneID: 124279412
NCBI-ProteinID: XP_046571189
LinkDB
Position
Unknown
AA seq 1239 aa
MSGESRRSTAAQFFIEEDAEAEQTTSTYERVVELLNQASLAQRDAQKISNLRQVQELIVH
KDPTLLDNFLDEILAFQSDRAVDVKRFVIGFMEEACKKDPEILSKVLPSLNMLLADENVN
VQKKVILSSIQMFKCTVQWLSKAKTATAEKTASWEQMHTLKSRLFEMLDSENDGIRTHVV
KFLETVVLVLSKRSADSDAQKQKEGDVSLDMIPDGRHYLKQKKLEDQGLKTFEMMLHFLG
SPHISSINLMTVMGALTNVARQRPLFFDQVVQAFEALHVNLPPTLAKSQVASVRKNLKMH
MMSLLKHPASVDHVTQITTLLTDLGASQSEVSKYLPKVDESRKRKNDEPSTSSKKAKVEE
DAADEEDDDIGMTPWSSRNESNRPTGASRQTAIDITADDLCPRLSPQNVADLVLLSMVML
PDTAPAQFQATYTPIAAAGTETQIRHIARLLATQLTMAGMGKGLGELQRTAMEQGISGDG
DTSPSSPSNFEPTSPKQLIQTLVGGTVSISDQEEFKKPEPITAPVVQPRKGVIRQFKLSS
VTHPLDSEKLDSMTLATVKRVFNTEKIAIQAHVPAARTKILACLTAAFGGELKDVMQTFI
FEDLRNRADLAFAWLFQEYANCQGFSVSAPLGERPTLHSYDECLTRLLTGLLEAQDQKDG
LFGRLMMEAPVITDNATHILKRYCQDPGRLDVGMAVLKDLILMRPSQRLRFLDVLLDLTS
HYEADVRNMAIETTKELYNKPSMQFPVEKYALVHLKKLLLPRPPSDSNQTIRVLRSTLSV
DIIEHWTEDVIKSHLYLYLGLLPANHRLIHELANVYTATSADIKRTILRVLEIPVKGMGM
QSPELLTMVENCPKGAETLVMRVIHILTDKTLPSSELVERIRDLYQKRVPDVRFLIPVLT
GLTKVEVISALPKLIKLNPMVVKEVFHRLMGGYGDSTASYTSPLTPAELLVALHNIDPAK
CDMKTIIKAANLCFSEKMIYTQEVLAIVMQQLMEQTPLPTLLMRTVLQSLSMYPRLIGFV
MNILQRLIIKQVWKQKKVWEGFVKCCQRTKPQSYQVLLQLPSSQLKNAFEICPDIREPLL
CHVKAFTSQQQAHIPKGIMTVLETDPLEEQRKAEAARIEAEKKAKQKEEEETFARVEAER
LAREKVEKEKSEKERADRELREKEKLEKEKQKAEKDKLERERKEKLDLEKKQQLEKEQRE
KEDQEKAIKKEKQDEEEKQRQEKEKEEVRKKKEREEKWH
NT seq 3720 nt   +upstreamnt  +downstreamnt
atgtcaggcgaaagtcgtaggtcaaccgccgctcagttcttcattgaggaggatgcagaa
gcagaacagacaacatcgacatatgaacgggtggtggagctcctgaatcaggcttcctta
gcccagagagatgcccaaaagatcagcaatctcagacaggttcaagagctgattgttcat
aaagatccaacacttcttgataatttcttagatgaaattttggctttccaaagtgaccga
gcagtggatgtgaagagattcgtgattggcttcatggaagaagcatgcaaaaaagaccca
gaaatcctctccaaggttcttcctagcctgaacatgctcttggcagacgagaacgtcaat
gtccagaaaaaggtcattctgtcatccatccaaatgttcaagtgtacggtacagtggctg
agcaaggccaagaccgcgactgcagagaagacggcatcgtgggaacagatgcacacactc
aaatctcgcctctttgaaatgctggactcggaaaatgatggaatccgaactcatgttgtg
aagttcctggagactgtcgtccttgttctctccaagagatctgcagactctgatgcccag
aagcagaaggagggggacgtgtccctagatatgattcctgatggtcgccattacctcaaa
cagaagaagctagaagaccagggcttgaaaacatttgagatgatgcttcatttccttggt
tcccctcacatctccagtatcaacctgatgactgtgatgggagcgttaacaaacgtagct
cgacagagaccgctgttcttcgaccaggttgtccaggcttttgaagccctccatgtgaac
ctgccgccaactctggccaagtctcaagtagccagtgtgaggaagaacctaaagatgcac
atgatgagtctcctaaagcaccccgcttctgtcgaccatgtcacccagatcacaacactg
ctcactgaccttggagccagccagtcagaggtgagcaagtatctgccgaaagttgacgaa
agtcggaagagaaagaatgatgagccatcgacatctagcaagaaagccaaggtggaggag
gatgctgccgatgaagaagacgatgacattggtatgacaccatggtcaagtcgtaatgag
tccaaccgaccaaccggtgcgagtcgtcagactgccatcgatataacagctgatgatctc
tgtcctcgtctgtctccacagaatgttgcagaccttgtccttctcagtatggtgatgctc
cccgacacagcccctgcccagttccaggccacctacacccccattgccgctgctggtacc
gagacacagatcagacatatagcccgtctcctagcaacacaactgaccatggcaggcatg
ggcaagggacttggggaactccagagaacagccatggagcagggcatatccggagatgga
gatacatcaccttcctctcctagtaactttgaaccaacatcacccaaacagctcatccaa
acactagttgggggcacagttagtatttctgatcaagaagagttcaagaagccggaacca
atcactgccccagttgtgcagcccaggaagggggtgatccgccagttcaagctgtcctcc
gttacacacccgctggactccgagaagctggactccatgacgctggccactgtcaagaga
gtcttcaacaccgagaagattgccatccaagcccatgtgccagctgctcgcaccaagatc
ctggcctgtctgactgcagcttttgggggagagcttaaagatgtgatgcagacgttcata
tttgaggacctgcgtaaccgtgccgacctggcgtttgcatggctgttccaggagtatgcc
aactgccagggtttcagtgtgtcagccccactgggggagagacccactctgcacagctac
gacgagtgtctcacacggctgctcacaggcctcctggaggctcaggaccagaaggacgga
ttgtttggtcgtctcatgatggaagccccggtgatcacagacaatgccactcacatcctc
aagcgatactgccaagacccgggtcgactagacgtagggatggcagtgttgaaagacctg
attctgatgcggccatcccagaggctcaggttcctagatgtcctgctggatctgacatca
cactacgaggccgatgtacggaacatggcaattgagacaaccaaagagttatataataaa
cccagcatgcagtttccagtagagaaatacgctctagttcacctgaagaaattgttgcta
ccacgaccaccatcagactccaatcaaaccatccgtgtcctccgctctacactctcagtg
gacatcatagaacactggacagaggatgtgataaaatctcacctgtacctctacctggga
ctcctaccagcaaaccacagactcatacacgagttggccaacgtgtacaccgccacttcc
gccgatatcaagcgaaccatcctgcgagtattggagataccagtgaagggtatggggatg
cagtcaccggagctgctgaccatggtagagaactgccccaaaggagctgagacgctggtg
atgagagtcatccacatcctcacagacaagactttgccgtcctcggagttagtggagaga
attcgagacctgtaccagaaacgagtgcccgacgtccgcttcctgatcccagtacttacc
ggtctcaccaaggttgaggtgatcagtgccctgcccaaacttatcaagctgaatccaatg
gtggtgaaagaagtctttcaccggctcatgggcggttatggtgacagcacagccagttac
acctcccccctcacaccagcggagttgttggtagctcttcacaacatcgaccccgccaag
tgtgacatgaagacaatcatcaaagcggccaacctgtgcttcagtgagaagatgatctac
acacaggaagtgttggctatcgtcatgcagcagctgatggagcagacgccgctgccaacg
ttgctgatgagaacagtactgcagtcattatccatgtacccacgactcatcggctttgtg
atgaacatcctacagagactcatcattaaacaggtgtggaaacagaagaaggtgtgggaa
gggtttgtcaagtgctgccagcgcaccaagccccagtcctaccaggtgctcctgcagctc
ccgtcctcccagctgaagaacgcctttgagatctgccccgacatccgcgagccgcttctt
tgtcacgtgaaagcattcacttctcagcagcaagcccacatcccaaagggcatcatgaca
gtgttggagacagatccgctagaggaacagcgtaaagcagaagcagcacgtattgaggca
gagaaaaaggccaagcagaaagaggaagaggagacgtttgccagggtggaagctgagcga
ctagctcgggaaaaggtggagaaagaaaaaagcgaaaaggagagagcagatagggaattg
cgggaaaaggagaaattggaaaaagagaaacagaaggctgaaaaagacaaactggagaga
gaaaggaaagaaaagttagacctggagaagaagcaacagttggagaaagaacagagggag
aaggaggaccaggagaaggctataaagaaggagaaacaagatgaggaagaaaagcagagg
caagaaaaagaaaaggaagaagtaaggaaaaagaaagaaagggaagaaaaatggcattag

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