Haliotis rubra (blacklip abalone): 124279776
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Entry
124279776 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124279776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrj03000
]
124279776
03021 Transcription machinery [BR:
hrj03021
]
124279776
03036 Chromosome and associated proteins [BR:
hrj03036
]
124279776
Transcription factors [BR:
hrj03000
]
Eukaryotic type
Helix-turn-helix
ARID
124279776
Transcription machinery [BR:
hrj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124279776
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124279776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
124279776
NCBI-ProteinID:
XP_046571612
LinkDB
All DBs
Position
Unknown
AA seq
2678 aa
AA seq
DB search
MDNISPDDGGDRMIVNNKLRSPNQMSEPNTMDSFQDGGQQNMNNSEQSEYPPMEGAHMNT
DMNNFPPTSGEHGMGPENYSRMNDNMHHGQMQNYPYNRGGYGLGSEQHGGMPALAGSTEF
GTQGSQFHGQYSQSQVRPGYPGMDKPGMSPSRPGMAPPGMAMMSPPGYNPSAQRMMSGQS
ISQQGGPTPTLNQLLQTPNSTQRYPNNYSEYPGGSGKGNDLGSGNMPYNMQGPWNARASY
PPGPMGGTSPYRNQTGSIPGEMNQPRRPTSMSPSNYQNAPGQYVGGPHQFSPGSQRYGRS
PGAQMAGGMGSTPYNPQMHPHFSQQQQQQQQQQHPASNANSPVPGYSQSMPSSQQQTFLS
QQLQPSSQPQPPGPSPPCPPASQSSPLHTPTTPIQALQHQTSQMKGSPVHNNSEQSQQGI
TENNRTSQNKRSESEEESKGEQGGGDDTDSRTTPTSTGVPHPAVSSLRPVPSPSGSAGSR
SNTPASLPGNQAGSPMPPRPPSSQLEGQGRMSQSPMATQGYNQQMMPPPIGPNQMGFVPG
GNKMGGAPGQMGPGQLGHYGQYNNQYPPGPGPGPGSGNYGRQHNVPGMQNASGMSNYPSQ
NMYNGPNPMGQGGPMYNNMPLNRGMGNSSYNNAYSGQGNVSMGQIGGMNNQYSGFNNHMG
PGPGPGPGPGPGSGPGPGQQGPGMNPNMPSHSSINSVGPPGQTVQPGMGMHTSPPAGPPM
PGPGGVKGAQAAAQAAMIAAANSAVGRGAQMRSVPAVPMGIAGQPRMFGPQSANQMPPNQ
MAHMNHMGPMNPNMNSMGSMNPNMNNMSNSMNQMPNSMSHSPVTNSMGPGSLGPSGPVPS
HKGGKSNSTALPPQLCLGNPTVCLQVQQRIPQLLPLRHPQVRYPQCPTHNLHHQQFSPNP
LQLLVKWKQRLQTRNQPIARLQCRKPSAVNSGSNSSDSMPASSTDTKPADPPAELPEPPP
TTTAATPPTLVATTTQSNSDTVSSCGGDSTSPNLTQAPAPPTTESSRGEVKMEGAMTTPS
SSSSPEHQNITTTAITTMVSTTTVVTQSITCPVTCIAETTMCNSQMGIDSIPSMPVMNCI
PMPTFPEEPPEKKKKDNVVVGAPSPGAPNLSSAQDDMSSSPSLPGTPKSGGPADLGKLYE
MGMEPERRPFLDKMLMFLEDKGTPVTSMPSISKQPLDLYKLYLCVKEKGGMVEVNKTKKW
KEICGFVNIGSSASAAFTLKKNYIKYLFAYECQFDKGGIDPQPILNQMEQALAQKREQKQ
KRAPSPAGSQGSSSQDAFRPPSTPNSQGMDPFSPSMPPPYMQNSDGGMGHMGGGAGMMPP
NNMMNPNTMMPPQSNMPHPSAMGGGHSNMPNSMIGGPGGMVPNSMMQGNMGQSNMMGNNM
PPNSMMGGSVPSSGMMGASMPNNAMMPGNMPNNSMLGGSSFNPQQNNMLGGNVPPNSVMG
NSMMPTSSAMAPSAGTTMPSTSDSISVQDPFADEPTSTNSQFSPRQSVSSQMPPYSSMQQ
QQQSAPPPQQQPPQQQQSQQQPTPSQQQQQQPPNQQHNSNFNYNARSGVPPNMPQYSSNM
NQSNMNSYGDGVPSRIPSQGEQFNESSTYPRPGMESYPPGTARPGESYVPGQSQYIARPP
SAPNRFPFGQQFERPERYEQQPGPTHPSQQYRPTSQAGMMAPNQPGPEQMLGARYPGQQI
PGMRPPHGGPQDQYPAQSYPAQGPGYTGPRPMMSQEGYPGYNGQQGSFPGPRPPMARDMT
GGIYRTPNKHYAEMPPAFGHSSPYTERGMPVPSHGGYPHEGMISHHEGHMTDPRRGDVGQ
WSPMASRYPSQQGPNYMPHAMGGMPPVAPGTPPMGPYSRAGPRGSPHARENKPYMTKAQR
PSPRNPTHEVARARGSARLSVSTKQKPGTLFPNAQFPPKKEIVFPPDSVEATLPLLNKRR
RLSSKDIGSLEAWRLMMALKSGLLAESTWALDTLNVLLFDDSTVAYFNLVHLPGLLEVLI
EHFRKCLMEIFGIFEDSDLGYDHKLEKCAEVESDCEDDGPDPDNLKNIHVTWNGKTVKVE
EDSPESWVADRKKWDVYSGYSGRRNHWQLGGGDLTHHIVTHMESGKTHEMFTRLFSNRKR
TREERDSIVNGPVSDHGENVESEEVAEKLDKPCLDTSEECVSHEETISIKVDHSAVCDKT
KIRNNFIKSVHMKTEPRDSGLDSVDSNDSSSNEAAVKEKAAAEKCAEECKDSEKCVNHID
KCENSSDSDQEAPCLTKEEPFDLNSKPEVEKNTVKEENGKEEITKMETDDVSKEAPETKV
ESDVTQDEDTQTEPSSETKPVDSKTGVLNSSISSRDDLAEISLSEQSLLNLSHQESELEE
EAYHRDEPPLCLSTEAQEELGRRCVCISNILRSLSCIPGNDVEMSKHAALMKVMGRLLLL
HHKHLPRSKCHRKLVEKDVDTDITEPDLMGDICEGNGEWFWSYLDALRENTLVIFANICG
HLNLSAYSEKICFPILDGLLHWAVCPSSCARDPLPSMSPQSVLSPQRLVLEALCKLCIHD
YNVDLLLATPPFERIVDLFSNLCKLVSNRKDQVPREFALVLLSELVQGDSNAARAIALQH
PCISLLVDFLETAEQNALQVANTQGIGALQNNPEVMGTSLDMLRRAATILLCLARIEENR
KLFVHHQSRLLALVMSQILDQSVAQILSDVLFECSLFS
NT seq
8037 nt
NT seq
+upstream
nt +downstream
nt
atggataatatttctcccgatgatggcggagacagaatgatcgtgaataataagctgcgt
tctcccaaccagatgagtgaaccaaacacaatggactcttttcaagatggaggccagcaa
aacatgaacaactccgaacagagtgaatatcctccgatggagggggctcacatgaacacc
gatatgaataatttcccaccaacatcaggagaacatggaatgggccctgagaactatagc
agaatgaatgataatatgcaccatggtcagatgcaaaactacccttataacagagggggc
tatggcctgggttcggaacaacatggcggtatgccggcattggcaggaagtactgaattt
gggactcagggttcacaatttcatggacagtattcacaatcacaggtgagaccagggtat
ccaggaatggataaacctggtatgagtccatccagaccgggtatggcaccccctggaatg
gcaatgatgtcgccccctggatacaaccctagtgctcaaagaatgatgtctggacaaagt
atatctcagcaaggtggtcccacacctacactaaatcagttgctacagactcctaactct
acccaaagataccctaataattacagtgaatatccaggggggtcgggcaagggaaatgac
ttgggatctgggaacatgccatacaatatgcaaggtccttggaacgcaagagcttcatat
ccccctgggcctatgggagggacatctccttacagaaatcaaactggttcaataccaggg
gagatgaaccagccacgccgtccgacatccatgtccccatccaactaccagaatgctcct
gggcagtacgtgggcgggccccaccagttctccccaggctcacagaggtatggcaggagc
ccaggggcacagatggctggtggcatgggcagcaccccttataatccacagatgcatcca
cactttagccaacaacagcagcagcagcagcaacaacaacatccagctagcaacgcaaac
agcccagtgcccggatacagtcagagcatgccctcttctcaacagcaaactttcctatct
caacagcttcagccgtcatcacagccccagcccccagggccgtcccctccctgtccgccg
gccagtcagtcctcgcccctacacacccccactacccctattcaggctctccaacatcaa
acatcacagatgaaggggtccccagtccacaacaactccgaacaatcacaacagggtata
acagaaaacaacagaacgagtcaaaataagaggtcagaaagcgaagaggagtcaaaaggg
gaacaaggaggaggtgacgatactgattcgcggacaacgccaacatctactggggtgcca
cacccggcagtctcctccctccgcccggtgccatcaccctcggggtcagcagggtcaagg
tcaaacacgccagcctctcttccaggaaatcaagctggcagtcctatgcctccacgaccg
ccgtccagtcagttggaaggtcaaggtcgcatgagtcagtcaccaatggcaacgcaaggc
tacaaccaacaaatgatgccgccacctatcgggcctaaccaaatggggtttgtgcctggg
gggaacaagatgggaggggcaccaggacaaatggggcccgggcaactcggtcactatggt
cagtacaacaaccagtatcctcccggtcccggcccaggcccaggttcagggaactacgga
cgtcagcataacgttccgggcatgcagaatgcctctggaatgtccaactatccctctcag
aatatgtataacgggccaaatccaatgggacagggaggtccaatgtacaacaacatgccc
ttaaacagaggaatgggcaattccagctacaataatgcatatagtggacaaggcaatgtt
agcatgggacagattgggggaatgaacaatcagtatagtggatttaacaaccacatgggt
ccaggcccaggtccgggtccgggtcctggcccaggttcgggtccagggccgggtcagcaa
gggcctggtatgaatcccaacatgccgagtcattcctccataaactctgtgggtccacct
ggtcagacggtacaaccaggcatgggaatgcacacctctccccctgcagggccacccatg
ccgggcccagggggcgtgaaaggggctcaggccgctgcccaggctgccatgattgctgct
gccaacagcgctgttgggaggggagcacagatgagatcggtaccggctgtgccaatgggg
atagcaggacaaccacgtatgtttggcccacagtcggccaatcagatgccacccaatcag
atggctcacatgaaccacatgggtcccatgaacccaaatatgaacagtatgggaagcatg
aacccaaacatgaacaatatgtcaaattctatgaatcaaatgcctaacagtatgtcccat
agtccagtgaccaacagtatggggccaggttcattgggaccatccggtcctgttccttca
cataaaggtggcaagtccaacagtactgccttgcctcctcaactgtgtctgggcaatcca
acagtctgcctacaagtgcagcagagaattccacaactgctgcctttacgacatccacaa
gttcggtatccccaatgcccaactcacaaccttcaccaccaacagttcagcccaaatccc
ctgcagctgttagtcaaatggaaacaaaggttgcaaactcggaaccagccgatagcaaga
cttcaatgtcggaaaccatcagcagtaaacagtggttcaaactcctcagattccatgcca
gcctcttcgacagacacaaaacctgctgatccacccgcagagttacccgagcctcctcca
accacaactgctgctacgcccccgacgttagtagccaccaccacccaatcaaactcggac
actgtgagcagctgtggtggtgacagcacctcccccaacctgacccaggctccagcacct
ccgaccacagagtctagtcgaggagaggtgaaaatggaaggagctatgaccacaccctct
tcatcctcttcccctgaacaccagaatatcactactacagctatcacaactatggtcagc
accactactgtagtgacccagagcatcacttgtcctgtgacctgcatcgcagagacgacc
atgtgcaactcacaaatgggaattgacagcatcccgagcatgccagtgatgaactgcatc
cctatgccaacgtttccggaagagcctccggagaagaagaaaaaggacaatgtggtggtt
ggagcgccctctcctggcgcacccaatctttcctctgctcaggacgacatgagcagtagc
cccagtttgcccggaacgcccaaatctggtggtcctgctgatttgggaaaactgtacgag
atgggcatggagcctgaacgacgaccattcctggataaaatgttgatgtttttagaggat
aaaggaactcctgtaacgtcaatgccttccatcagtaaacagcctcttgatctctataaa
ctatatctatgtgtgaaggagaaaggaggaatggtcgaggttaataagacgaaaaaatgg
aaagaaatttgtggttttgtgaacattggatcatcagctagtgctgctttcacattaaaa
aagaactatattaagtacctgtttgcttatgagtgccagtttgataaaggaggcattgat
cctcagcctatccttaaccaaatggaacaagctttagctcagaaacgagaacagaaacag
aagcgagctccttcaccagctggatctcaaggttcatcatcccaggatgcattccgcccg
cccagtaccccaaacagccaggggatggaccccttctccccaagcatgcctcccccatac
atgcagaactctgacgggggaatggggcacatgggaggaggtgcgggcatgatgccaccc
aacaacatgatgaacccaaacacaatgatgcctccgcagtccaacatgccccacccttct
gctatgggtggtggtcatagcaacatgcctaacagtatgatagggggcccaggtggaatg
gtgccaaacagcatgatgcagggcaatatgggtcagagtaatatgatggggaataatatg
ccacccaacagtatgatggggggcagcgtgccttcgagtggaatgatgggggcgtcaatg
cccaataatgctatgatgccagggaatatgccaaacaacagtatgctagggggcagtagt
tttaacccccaacagaacaatatgctaggaggcaacgtgcctccaaacagtgtgatggga
aattccatgatgcccacctccagtgcaatggccccaagtgctggcacaaccatgccttca
acatcagacagtataagtgttcaggatccgtttgctgatgagcccacgtctactaattcc
caattttctcctcgacaaagtgtcagttctcagatgccgccatattcaagtatgcagcag
caacaacaatccgcgcccccgccacaacagcaaccccctcaacagcagcagtcccagcag
cagccaacaccttctcaacaacagcaacagcagccgccaaaccagcaacataacagcaac
tttaactacaatgctcgatcaggagtgcccccaaatatgccccaatattccagtaacatg
aaccagtccaatatgaacagttatggggatggtgttcccagtcgtatcccctctcaagga
gagcaattcaacgagtcatcaacgtacccacgaccaggaatggaatcctacccacctgga
actgcacggcctggtgaatcctatgttcctggtcaaagtcagtacattgccaggcctcca
agcgcaccaaatcgatttccctttggacagcagtttgaacgaccagaaaggtatgaacag
caacctggccccacccaccccagccaacagtatcgccctacatcccaagcagggatgatg
gccccaaaccagcctggccccgagcagatgttgggagcccgttacccggggcaacagata
ccagggatgaggccgcctcatgggggcccacaggatcagtaccctgcacagtcgtaccca
gcacagggccctggatacacaggaccccggcccatgatgagtcaggaaggataccccggg
tacaacggtcaacagggctcctttcctgggccccgcccgcctatggccagggacatgacg
ggcgggatataccgcacccctaacaaacactacgcagagatgccaccagcgtttggccat
tcatcgccatataccgagcgaggtatgcctgtccccagtcatgggggataccctcacgag
ggtatgatttcacatcatgaaggtcacatgactgatcctcgacgaggtgacgttggacag
tggtctccaatggcttcaaggtacccctcccaacaaggcccaaactacatgcctcacgct
atgggaggcatgcctccggtcgcaccaggcacaccaccaatggggccatacagcagggct
ggaccccgaggatctccacacgccagagaaaacaaaccatacatgaccaaggcacagcgg
ccttctccgcgtaatccaacacacgaggtagctcgtgcccgagggtcagctcgcttgtcg
gtcagcaccaagcagaagccgggtactctgtttccaaatgctcagttccctcctaagaag
gagatagtgttccccccagacagcgttgaggccacactaccgcttctcaataagaggcga
cgtctgtccagcaaagatataggatccttggaagcctggagattaatgatggctctgaaa
tcaggtttgctggcggagagcacatgggctctggacactctcaacgttctgttatttgat
gacagcactgtagcttattttaaccttgtacatctgcctggcttacttgaagtgttaata
gaacatttccgcaagtgtttgatggagatatttggcatatttgaagattccgatcttggg
tatgatcacaagctggaaaagtgtgcagaagttgagtcagactgtgaggatgatggtcct
gatcccgataaccttaaaaatattcatgttacgtggaatggcaagactgtcaaggttgag
gaggactcccctgaaagttgggtggctgatagaaagaaatgggacgtgtatagtggttat
agtggcaggcggaatcattggcagctagggggcggggacctcactcatcacattgttaca
catatggaaagtggcaagacacatgaaatgtttaccaggttattttccaacaggaaaagg
actagagaagaacgtgatagcatagttaatggccctgtgagtgaccacggtgagaacgtt
gagagtgaggaggtggcagaaaagttagacaagccatgtttggatacgtcagaggagtgt
gtgtcgcacgaggaaacaatctcaattaaagttgatcattctgctgtgtgtgacaagacg
aaaattagaaacaatttcatcaaatctgtgcacatgaagactgagcctcgtgactcaggt
cttgacagtgtagactcaaacgattcatcatcaaatgaggcagcggtgaaggaaaaagct
gctgcagaaaagtgtgctgaggagtgcaaggattcagagaagtgtgtgaatcatatagac
aagtgtgaaaattcatctgattcagatcaggaagctccatgcctcacaaaggaggaacca
tttgatctgaactcaaagcctgaagtggaaaagaacacagtaaaggaagaaaacgggaaa
gaagaaataacaaaaatggagactgatgacgtttcgaaagaagctcctgaaacaaaggtt
gaatctgacgtaacacaagacgaggatacccaaacagaaccttcatcagagaccaagcca
gtggattccaagacaggagttctgaattccagcatctcgagtcgagatgatttggcagag
atcagtctgtctgagcagtctctgttgaatttgtcccaccaggagagtgagctggaggag
gaggcgtaccaccgggacgaaccaccactgtgcctgtccacagaagcccaggaggagctg
ggacggcgctgtgtctgcatctccaacatcttgcgcagcctctcctgcattccgggcaat
gacgtggagatgtcgaaacatgccgcactgatgaaggtgatggggaggttgctgctgctt
catcacaaacacctacctcgctcaaagtgtcatcggaaactggtagagaaggatgtggac
acagacatcaccgagccagacttgatgggagacatatgtgaaggcaatggggaatggttc
tggagctacttagatgctctgcgtgagaatacattagtgatatttgccaacatctgtgga
catctaaacttatcggcctactctgagaaaatctgcttccctattctggacggacttttg
cactgggcagtgtgtccgtcatcgtgtgctagagaccccctgcctagcatgtccccccag
tccgtcctctcacctcagcgactcgtgctcgaagctttgtgcaaattgtgcatacatgac
tataatgtagatttactgttggcaactcctccttttgaacggattgtggacctgttttca
aatttgtgcaaattggtttcaaataggaaggaccaagttccacgggaatttgctctagtt
ctcttatcagagttagttcaaggtgacagtaacgctgctcgggccattgctctacaacac
ccctgtatatcattacttgtagactttctggaaacagctgaacagaatgcattgcaggtg
gcaaatacccagggcataggagctcttcagaacaacccggaggttatgggtactagtctt
gacatgttacggagggctgccaccatcctcttgtgcttagctagaattgaggaaaatcgc
aagctgtttgttcatcatcaaagtaggttgttagccttagtcatgtcgcagattctggat
cagagtgttgctcagattctgtcagacgttctgtttgaatgttccctgttttcatag
DBGET
integrated database retrieval system
