Haliotis rubra (blacklip abalone): 124281589
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Entry
124281589 CDS
T07967
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03018
RNA degradation
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124281589
09123 Folding, sorting and degradation
03018 RNA degradation
124281589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124281589
03041 Spliceosome [BR:
hrj03041
]
124281589
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124281589
mRNA degradation factors
5'-3' decay
Lsm complex
124281589
Spliceosome [BR:
hrj03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124281589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
124281589
NCBI-ProteinID:
XP_046573489
LinkDB
All DBs
Position
Unknown
AA seq
91 aa
AA seq
DB search
MAAPFSNPSQLLPLELVDKCIGSRIHIIMKNDKEIVGVLLGFDDYVNMVLEDVTEFESTP
EGRRVTRLDKLLLNGNNITMLVPGGEGPEMT
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacctttttcaaacccgtctcagttgttgccattagagttggttgacaagtgt
attgggtccaggattcacatcatcatgaagaatgacaaggagattgttggagtgttgctg
ggctttgatgactatgtcaacatggttctcgaggatgtcacagaatttgagagtacacca
gaaggacgtcgggtgacccgtctggacaaactgctcctcaatgggaacaacattacaatg
cttgtgcctggaggcgagggaccagagatgacctag
DBGET
integrated database retrieval system
