Haliotis rubra (blacklip abalone): 124281729
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Entry
124281729 CDS
T07967
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease-like
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124281729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124281729
Enzymes [BR:
hrj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124281729
DNA repair and recombination proteins [BR:
hrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124281729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF5870
Motif
Other DBs
NCBI-GeneID:
124281729
NCBI-ProteinID:
XP_046573655
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MPPKSKKKAAKEVVDADAAAAEEPPVKKTKKGKKDEADEGEEATPKKGKGKKKDEENGDG
DKKKVVIPTMTLDEQDFSCSAKTKDGLDWNLKISSWNINGIRAWLGKEGTAYIEKEAPDV
FCVQETKCSLEKMPDTVNVDGYHAYWSSGDTEGYAGTGMYCKTKPIEVTYGIGESKHDKE
GRVITAEFEKFYMVTAYIPNSGRGLTRLNYRTKEWDVAFQDYMKKLDDKKPVILCGDLNV
AHLDIDLKNPKTNKKTAGFTPQEREGFTNLLNEGFVDSFRLLYPEQEGAYTFWAYFMNNR
SKDVGWRLDYSVISERLKDNLCDNIIRKFVQGSDHCPIILLLNL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaaagtcaaagaaaaaggctgccaaggaagtggttgacgctgatgctgctgca
gctgaggagcctccagtaaagaagacaaagaaagggaagaaggatgaggccgatgagggt
gaggaggccacgcccaagaagggaaaagggaagaagaaggacgaggagaatggagatgga
gacaagaaaaaggtggtaattccgaccatgaccttggatgagcaggacttctcctgcagt
gcaaagaccaaagatggacttgactggaacttgaagatatcctcctggaatatcaacgga
atcagggcatggcttgggaaagagggtactgcgtatatcgagaaggaggccccagatgtt
ttctgtgtgcaagagacaaagtgcagcttggagaagatgcctgatacagtgaatgtcgat
ggttaccatgcctactggtcatcaggggataccgagggctatgctgggacaggcatgtat
tgcaagacgaagcctattgaagtcacatatggaattggtgagagcaaacacgacaaggag
ggacgggtcatcacagccgagtttgaaaagttctacatggtcacagcatacattccgaat
tctgggcgtggtttgacacgacttaactaccgcacgaaggaatgggatgtggctttccag
gactacatgaagaagctggatgacaaaaagccagtcatcctgtgtggagacctcaatgtt
gcacatcttgacatagacttaaaaaatccaaaaaccaacaagaaaactgcaggttttaca
ccccaggagcgtgaggggttcaccaacctgctgaacgagggctttgtggactcgttccgc
ctcctgtatcctgaacaagaaggtgcctacacgttctgggcctacttcatgaacaacaga
tccaaggatgttggctggagattggactactccgtgatatcagagcgtctgaaggacaac
ctttgtgacaacatcatcaggaagtttgtgcagggtagtgaccattgtccgatcattctg
ctcctcaacctttaa
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