Haliotis rubra (blacklip abalone): 124281850
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Entry
124281850 CDS
T07967
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04140
Autophagy - animal
hrj04142
Lysosome biogenesis
hrj04145
Phagocytosis
hrj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
124281850
04142 Lysosome biogenesis
124281850
04140 Autophagy - animal
124281850
04148 Efferocytosis
124281850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrj04131
]
124281850
Membrane trafficking [BR:
hrj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124281850
Hops complex
124281850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_Vps41
zf-RING_5
zf-rbx1
ACBP4_C
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-RING_2
zf-RING_11
zf-ANAPC11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
124281850
NCBI-ProteinID:
XP_046573809
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MASILDQYEEESARQASGIRQSPAQSLQEPIGVGFIDARLETESPIFNKKKVNFKPPDTI
THLDVCNNFLVMVMSSNIMLRLDLEHPDNPDEVEIPRAVDDKVHKIFLDPTGKHLIISMK
CGDNYYLSRNSKKPKPIAKLKGHLIDSVGWNWQNANEATTSAILLGTSKGIIFETELTAN
EDSRFFQGSLDQYLRQLKLATKPHEMFNLGRDKPQPVTSLQFDRLPSTTMTEYRYYILAT
TPGRLYQFIGTVSTSAEPPMFMSLFQQYETGVETVQFLELPGDFGYSELHLFFPKFRQAA
TKFAWMTGPGIYYGDIDVTGAAGPNSVLSNAKLMPYPKEADEKTAPPVSMLLTEFHVLIL
YPDRLKAVCVLNEQLIYDDVYVERFGRLLGCCKDPIRGQVWTYTTNSVFKYKIVKEARDV
WQMYLDKGQFELAREYCKDNPSQLDKVLTKQAEYLFENRKYEASAAMYAETQNSFEEIAL
KFIRLPQKEALKTFVQKKMSALRQSDKTQMTMLVTWLIELYLNQLGELKEQGMDDSDDYM
RIQEEFRKFLGQTRVKETASNNRGVVYDLIASHGDVEDMVFFAVLMKDYERVISHHIQHE
NYKGALDVLKKQSEVELYYKFSPLLMQYTPKETVDAWMTQHKYLDPKQLIPALVQYDHQK
YREQGNEAIRYLEFCVHKLGNKDGPIHNYLLSLYAKLQSDQLMTYLHLQGEDVDDVSYDL
KYALRLCSEYGHKRACVHVYSLMGLYEEAVDMALSVDVELAKTQADKPDEDDIELRKKLW
LRIARHVVEEEKDIKRAMDFLHECDLLKIEDILPFFPDFVTIDHFKDAIITSLHEYNDHI
KSLKDEMEEATQSAEEIRKEIQSFRNKYAFVKAEDKCSSCSYPLMVRAFYLFPCQHKFHM
DCLIADVLPSLSGSKKSKVDQLQRKLAERDESVPYRKSTSAAQLGVNKDADVKAELDDLV
SSECIYCGDFMIRCIDKPFIEDDEWKSAEVEWE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcatctatattggaccagtacgaggaagagtcagctcgacaagcttcaggaatcaga
cagtcacctgcacaaagtctacaagaaccgattggtgttggcttcattgatgcccgtctg
gaaactgaatcacctattttcaacaagaaaaaggtcaactttaagccgccagacaccatc
acccatctggatgtgtgcaataacttcctggtgatggtgatgagctccaacatcatgctg
cgtctggacctggaacaccctgacaaccctgacgaggtagagatcccacgtgctgtggat
gacaaggttcacaagatcttcctggaccccactgggaagcacctgatcatcagcatgaag
tgtggcgacaactactacctctcaaggaactccaagaagcccaaacctattgccaaactc
aagggtcacctgatcgactctgtagggtggaactggcagaatgctaacgaggcaaccacc
agcgctatacttctcgggacaagcaaaggcattatatttgagacggagctgacagccaat
gaggacagtcgtttcttccaagggagcctggaccagtacttgagacaattaaagcttgca
acgaaacctcacgagatgttcaacctgggtagagataagcctcagccagtgacgagtctt
caatttgatcgtctgccgtcaactacgatgacagaatatcgctactacattcttgcaacc
accccaggtcgtctgtaccagtttatcgggacagtgtccacgtctgccgagcctcccatg
ttcatgtccctcttccagcagtatgaaacaggcgtggaaacagtgcagtttcttgagtta
ccaggcgactttggttacagtgagctgcacttgttcttccccaagttccgccaggcggct
acaaagtttgcctggatgacagggcctggtatttactatggagatattgacgtcacagga
gcagcaggacctaactcagtattgtccaatgctaaactcatgccctacccgaaggaggca
gatgagaaaacagcaccccctgtatcaatgctgctcacagaattccatgtactcatactt
tacccagacagattaaaagctgtgtgtgtgctgaacgaacaacttatatacgatgatgta
tatgtggagaggtttggtagactgctgggctgctgcaaagatccgatccgaggtcaggtg
tggacctacactaccaacagtgtattcaagtacaagattgtgaaggaggcgcgtgacgtc
tggcagatgtacctggacaaggggcagtttgaactggccagagaatactgcaaggataat
ccatcacagttggacaaggtgttaaccaagcaagctgaatacctctttgaaaacagaaaa
tatgaagccagtgctgccatgtatgcagaaacacagaattcatttgaagagatcgccctc
aagtttatccgacttccacagaaagaagccctcaaaacctttgtacagaaaaaaatgtct
gctttacgacaaagtgacaagacgcagatgacgatgcttgtgacgtggctgatcgagctg
tacctcaaccagcttggggagctgaaggagcaaggcatggatgactctgacgactacatg
cgcatacaggaagagttccgaaagttccttggtcagaccagggtcaaggagacagcgtcc
aacaaccgtggggttgtgtacgacctgatagctagtcatggtgatgtggaggacatggtc
ttctttgctgtattgatgaaagactatgagagagtcatcagccatcacatccagcatgag
aactacaaaggtgccctggatgtgttgaagaaacagagtgaggttgagctgtactacaag
ttctctcccctgctgatgcaatatacaccgaaggaaactgtggatgcctggatgacccaa
cataagtaccttgaccccaaacagcttatccccgccctagtgcagtatgaccatcagaaa
tacagggaacagggtaatgaagctatccggtatctcgagttctgtgtgcacaagctgggc
aacaaggacggtcccattcacaactatctcctgtccctgtatgccaagctgcagtctgat
caactcatgacctacctccacctgcaaggggaggatgttgatgatgtgagttacgacctg
aagtatgcgctgcggctttgttccgagtatggccacaagagggcgtgtgtgcatgtgtac
tcactcatgggcttatatgaggaggcagtcgacatggctctttctgttgacgttgagctg
gcaaagacccaggcagacaaacctgacgaggatgacatagaactgaggaagaagctctgg
ctgcggatagctcgacatgttgtggaggaagagaaggacatcaagcgtgccatggacttc
ctgcatgaatgtgacctcctcaagattgaggacatcttgcccttctttccggactttgtc
accattgatcattttaaggacgccatcatcacgtcactgcatgagtacaacgaccacatc
aagtcactgaaggacgagatggaggaggccacacagagtgctgaggagatcaggaaggag
atccagagcttcagaaacaaatacgcctttgtgaaagctgaagacaagtgttcctcctgt
agctacccactgatggtgagggcattctacctgttcccatgccaacacaagttccacatg
gactgtctaattgcagatgtgctgcccagtctgtccggatctaagaagtccaaggttgac
cagttacagaggaagctggcagagagggatgagtctgttccgtataggaagtccacatca
gcagcacagcttggggtcaataaagatgcagacgtgaaggcagagctggatgacctcgtg
tcgtcagagtgcatatactgcggagacttcatgatcaggtgtatcgataagccatttatt
gaagatgatgagtggaagtcagctgaagtggaatgggaataa
DBGET
integrated database retrieval system
