Haliotis rubra (blacklip abalone): 124282121
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Entry
124282121 CDS
T07967
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124282121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124282121
03012 Translation factors [BR:
hrj03012
]
124282121
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124282121
Translation factors [BR:
hrj03012
]
Eukaryotic type
Release factors
124282121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
124282121
NCBI-ProteinID:
XP_046574046
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MASQNGQDGIPDAWDENVASGDSGNDAVNDLTKPLSSLNVNAPAFVPGQNVFAQTFVPTG
PGSDNQDNVADSQDPVLNETQPEGGTEKMETDAQDKGADGDGNIADEWENSEEDSEQTTD
KDMETEVPVAPKPKKKPPSVSSLEPKKEHVNVVFIGHVDAGKSTIGGHLLYLTGMVDKRT
LEKYEREAKEKNRETWYLSWALDTNLEEREKGKTVEVGRAFFETEKKHFTVLDAPGHKSF
VPNMIGGASQADLAILVISARKGEFETGFERGGQTREHAMLVKTAGVKHLVVLINKMDDP
TVEWSEIRYNECKEKLLPYLKKCGFNPKTDIYFMPCSGLTGAFLRHVVDDSLCPWFSGPS
LLDYLDAMPSLDRSMDAPLRLPVVDRYRDMGTIVLGKIESGSITKNMTLAMMPNKQSVKV
MQIWSDEYDVDDAMPGENVKLKLSGVEEEDVSPGFVLCPPDSPCHTGRIFDAQIVMLELK
SIVCAGYSCVLHIHSASEEVTIKSLICLLDKKSGEKTQIKPRYIKQDQVGIARFEVNGGM
ICLESFKDFPQMGRFTLRDEGKTIAIGKVLKIRE
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcaaaacggtcaggacggcatcccagacgcttgggatgaaaacgtggcttct
ggggactccggaaacgatgccgtcaatgacttaacgaaaccattatcaagtctcaatgtt
aacgcacctgcattcgtgccaggccaaaatgtgtttgcacaaacatttgtaccaactggg
cctggttcagacaatcaagataatgttgcggactctcaggacccagtcctgaacgagaca
cagccagaagggggtacagagaagatggagacagatgcacaagataaaggagcagatggt
gatggcaatatagctgatgagtgggaaaatagtgaagaagactctgaacagactacagac
aaagacatggaaactgaggtaccagttgcacccaaaccaaagaagaaaccaccttctgta
tcctccctggaacccaagaaggagcatgtcaacgttgtattcataggacatgttgatgct
ggcaagtcaacaatcggaggccatctactgtatctcacaggtatggtggacaaaagaaca
ctagagaagtatgagagagaggccaaggagaagaacagagaaacatggtatctatcatgg
gcattagacactaatctcgaggagagggagaaaggaaaaacagtagaagttggacgtgct
ttctttgaaacagagaagaaacacttcactgttctggatgccccaggtcacaagagtttt
gttcccaacatgataggaggggcatcccaggcagacttggcaatattggtaatatcagcc
agaaagggagagtttgaaactgggtttgaacgtggaggacagacaagagaacatgctatg
ttggtgaagacagctggtgtgaagcatttagtggttctcataaataaaatggatgatcct
acagtggaatggtcagaaataagatacaatgaatgtaaagagaagttactgccctattta
aaaaagtgtggcttcaacccaaagactgatatttattttatgccctgttcaggcttaaca
ggggcttttctcagacatgttgtggatgacagtttgtgtccatggttcagcgggccatca
ttattggactacctagatgctatgccatcgctagacaggtcgatggatgccccattgcgg
ctaccagtagtagacagatacagggacatgggaaccatcgtcttgggcaaaattgaatct
ggatcaataacaaagaatatgacattagccatgatgccaaataagcaatctgtaaaggta
atgcagatctggtcagatgagtatgatgttgacgatgcaatgcctggtgaaaacgtcaaa
ctgaagctgtctggtgtggaagaagaggatgtgtcacctggctttgtcttatgtccacct
gacagtccatgtcatacaggacggatatttgatgctcagattgtgatgctggaactcaag
tcaattgtgtgtgcaggctacagctgtgttttacacatccattcagcgtcagaggaggtc
accattaaatcactgatctgtcttttggacaagaagtcaggagaaaagactcaaatcaaa
ccacgctacatcaagcaggaccaagttggtattgctcgatttgaggttaatggtggaatg
atttgcttagagtctttcaaagattttccacaaatgggaagatttacactaagagatgaa
ggaaaaacaattgctattggaaaggtgctcaaaatcagagaataa
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