Haliotis rubra (blacklip abalone): 124282141
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Entry
124282141 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124282141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124282141
03036 Chromosome and associated proteins [BR:
hrj03036
]
124282141
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124282141
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124282141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
124282141
NCBI-ProteinID:
XP_046574096
LinkDB
All DBs
Position
Unknown
AA seq
1864 aa
AA seq
DB search
MFGQKPMGFGTGFGGGTSSTFGSSTPFGQNNNSFGNKPAGAAGFGTPAFGSTTPAAGGLF
GANNNTSAGGLFGQNNAGTFGNQSTGFNFGNTPSTSSGGAGGLFGQTQTQSAGGLFSTPQ
STTSAFGAKTPGFGGFGTSTAPSGGLFGQQNQTNSGGMLFGQAGAAGFANNANGTTVKFN
PPSGQDTMMKNGVSASINTRHQCITAMKEYDNKCLEELRLEDYQANRKGKQAGAAVAGGG
LFGSTPATSSTGFSFGQQQQQQQQQQAATGFTGFGANTSTANSGLFGQTNPQASGGMFGQ
NKPLFGGASTTTTASTSGFGFGNTSQATGLFGQNQQNKPLFGTATTQSSLFGGTSTAPAT
SFSFGNTGGFGTQAASTGLFGSKPAGFGAATTSAPGFFGSGGGGNLFAKPTTTSSFGFGG
TNPGTAGFGGFGGFGSTANTGGAGLFGNKPGGFGTAAASTLGGATNSFNFGQTGQTGTGL
FGVNNLNKPSTFGFNFNSGQTTASTGFGGVGAGSGFSLGGNTTTLGTTTNPSASNNQLQQ
QLLALTSSPFGDSPLFWNLKQNSEKREEVLKPTNPAAQKAALSSSSQYKVSPRPTAKIKP
KSLHSLMNGSKSQLFDGLEDEDFSFGNDTFMPRRSVKKLTLKKVNGDSSLSRTSSQTDEH
PDLQSFSQDTPRPKPITRTLQADLDRAAQSPDTEPILRTKSITEPARQSPIKDTTNLDDT
IAALNSKNKALSGDSHSDMNKSHSEQDVSIEPQPQMEDFEPHPTGIILTRPGYYTNPSLD
SLVELIDENGDCFVDDFTIGRENYGSLFFPGSTNVANLNLDEIVHFRRKEVIVYPDDDKK
PPLDEGLNRIAEVTLDCVWPSDKTTRSPIKEPSRLRTMNYQTKIEEITAKIGAKFIDYRP
ETGSWVFQVKHFSKYGLVDDSDEEEVSESEKKKLKLAQEQQLQIQKLKIQTEAQMKGKEV
RGQDDMAMQLQGLAGKPLSPPKEGYEAHYAQSEGIDDLDEDMPDITMEKFPRDMEDSDDD
MKGVTDTPSSHRLASSMGVSAHSMQVMKASFFGDDDYQDDFKGKLSGFTSGQGFLKQQDK
TMPSLFSPGLKSKYVSPLRVTQSPVPQEMQKQPPGLFSQKIIAPEARRPPQNFGHPPLAE
HMLLTSGMSQKDTPRKIAGSRIRREIPPVSHSLMYKKQALIVDAGCLMGRSFRVGWGPGW
TLVHSGQPSNYKEKEAPRQTPFSLLPGIQGGKPVRAGSKAWTVTCEKMDVADYLTGNDKT
VISTHEEMLDVQLEHSRRDTDGGCPLFVPSPGVDSLHQYAQLGEKLLEENRGHPDESSVD
HIRMVWNLCVALWGNLPEFRYSDTDEYAVSQARREAFSKWLSETAQPKIKEEVQESKFKN
QGHLIAILSYLSGRQITDACTLAQKSGDHRLALSLAQAVGSHVARQMLARQLEEWAELGA
NHFIDQVRLKIYSLLSGQLVWSSSTAVNTCDNMDWKRALALHLWYHCKPNATIPEALAQY
EDAFKSRTSYGKYSNAPLPPYLEENDSYEEEEEVIDEQDEHVVRDTCYHLLKLYCQRGHR
LERILNPTTSTANQLDYRLSWHLYQVLQSMSYHHVSPYHAACLHTSFAAQLEALDLWHWA
VFSLLHIEDPLRRETAVRSVLERHVSLSKNPKYLHKEEFVRERLLVPPAWIHHAKAIKAQ
SENKYHDEAWHLLKAAQWNEGHKVILAHIAADAIINENFDYLRRYLEELSPPEISSSVLD
WSTGGKVFLDYINLCQHLEDLKQGTPSAYDLERLQPAVTSLCNRVGSLECRNSKERLCQS
EMAKKSANLLGTLLTFQCAGSATGRPPTRLVASHISGLPMPEDYALQELRELTRSHLLEM
TMGT
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacaaaagccaatgggttttggaactggatttggtggaggcacttcttccaca
tttggaagttcgacaccatttggacaaaacaacaactcattcgggaacaagccagctgga
gctgcagggtttggaacaccagcctttggatcaacaactccagctgcaggaggcttgttt
ggcgccaacaacaacacaagtgctggaggcttgtttggtcagaataatgctggcacgttt
gggaaccagtcaactggattcaactttggcaacactcccagtacatccagtggaggggcg
ggagggttgtttggacagacacagacccagtcagcaggtgggctgttctcaacaccacag
tcaaccacatcagcttttggagccaaaacgccaggatttggtggatttggaacttccacg
gctccttcagggggattgtttggccagcagaaccagacaaactcagggggaatgttgttt
ggtcaggctggagcagcagggtttgctaacaatgctaatggcactacagtcaagttcaac
cctccaagtggccaggatactatgatgaagaatggagtgtcagccagcatcaacacaaga
caccagtgcatcacagccatgaaggagtacgacaacaagtgtcttgaggaactgagacta
gaagactatcaggccaatcggaaaggcaagcaggcaggtgctgctgttgccggaggtggt
ttgtttggctctactccagcgacttccagcactggcttctcatttggtcagcaacaacag
cagcagcaacagcagcaggcagcaactggctttacaggatttggagccaatacatctaca
gcaaactctggcttgtttggtcaaaccaaccctcaggctagcggtggaatgtttggacag
aacaagccgctgttcggtggagccagtaccaccacaaccgccagtacctctggctttgga
tttggaaataccagtcaagcaacaggattgtttggacaaaaccaacagaataagcctctg
tttggtacggctaccactcagtcctctttgttcggtggcacaagcacagcgccagcaaca
tcattcagctttggtaacactggcggcttcggcacacaggctgcatcgactggactgttt
ggtagtaagccagcaggatttggagcagcaacaacttcagcacctggattttttggtagt
ggtggtggtggcaatctctttgccaaaccaacaacaacgtcctcatttggatttggtggc
actaacccaggaacagctggctttggagggtttggagggtttggttcaacagctaacaca
ggaggggccggtctgtttggtaacaagccaggtggatttggaacagcagcagcttccaca
ctaggtggcgcaactaactccttcaactttggtcaaactggacagactggtacaggactg
tttggcgtcaacaacttgaacaagccttcaacctttggcttcaacttcaacagcggtcag
actactgcatccacaggttttggcggtgtaggagcgggatcaggcttctcattaggagga
aacaccaccacacttggaacgacaaccaacccatcagcaagcaacaaccagctgcagcag
cagctcttggctctcaccagctcaccgtttggggactcccctctcttctggaatctcaaa
cagaactctgaaaaaagggaggaagttcttaagcctaccaaccctgcagctcagaaagca
gccctgagttcttccagtcagtacaaagtgagccctcgacctacagccaagatcaagcca
aagtcactgcactcactcatgaacggaagcaagtcccagttgttcgatgggttggaggat
gaggatttcagtttcggcaatgacacattcatgcctcgtcgaagtgtgaagaaactgaca
ctgaagaaagtaaatggcgattcctccttgagcagaacctcatcacagactgatgaacac
cccgacctacagtccttcagccaggacactcccagacctaaacccatcacaagaacacta
caagcagacttagatcgtgcagcccagagtcctgacacagagccaatactccgtaccaag
agcatcacagaacctgccagacaatctcctatcaaagataccaccaatctggatgacact
attgctgctctgaattccaagaacaaagctctgtcaggggacagccattctgacatgaac
aaatctcacagtgaacaagatgtctccatagaaccccagccacagatggaggacttcgag
ccccacccaacagggatcatcttgacccggccaggctactacacaaacccatcactggac
agccttgtggagttgatcgatgagaatggagattgttttgtggatgattttaccatcgga
agagaaaactatggcagtctgttctttcccggttcaaccaatgttgccaacttgaacctg
gatgaaatcgtgcatttccggcgtaaggaggtgatagtgtaccctgatgatgacaagaaa
ccccctctcgatgaaggtcttaacaggatagccgaggtgacactggactgtgtctggccc
agtgacaagaccacaaggtctcccatcaaggaaccttctagattgaggacaatgaactac
cagacaaaaatagaagagatcacagcaaagattggagccaagttcattgactaccgacct
gaaactggatcctgggtttttcaagtgaagcatttttccaaatatggtcttgttgatgac
tctgatgaagaggaagtgtctgaatcagaaaagaaaaaattgaagcttgctcaagaacag
cagttgcagatacagaagctgaaaatacaaactgaagcccagatgaaggggaaggaagtt
agaggtcaagatgacatggcaatgcagcttcaaggtctagctggtaaacctttgtcaccc
ccgaaggagggatatgaagcccattacgctcagtctgaaggtattgatgacttagatgag
gatatgccagatatcaccatggaaaagttcccccgagatatggaagattcagatgatgat
atgaagggtgtgaccgacaccccctcgtcccaccgcctggcctcaagcatgggggtcagt
gctcacagcatgcaggtcatgaaggcctccttctttggcgatgacgactaccaggatgac
ttcaaaggcaagctgagtgggtttacatccggccagggcttcctcaagcagcaggacaag
acaatgccaagtctgttcagccctgggctcaagtcaaagtatgtgagtccattgagggtg
acacagtctccagtaccccaggagatgcagaaacagcccccaggtcttttctcacaaaag
attattgccccagaagcccgccggcccccacagaattttggccatcctccgctcgctgaa
cacatgttgttgactagtgggatgagccagaaggacacgcccaggaagattgcggggtcg
cgaataaggagggaaataccacctgtcagtcactcactcatgtacaagaagcaggccctg
atagtggacgcaggctgcctgatgggaaggtcgttccgtgtgggctgggggccaggctgg
acactggtacacagtggtcaaccctccaactacaaggagaaagaggcaccgcggcagaca
ccattctccttgttgccaggcatccagggtgggaagccagtgagggcaggcagtaaggct
tggactgtgacgtgtgagaagatggacgtagcagattatctcactggcaatgacaagaca
gtcatttccacccatgaggagatgctggacgtgcagctggagcactcccggagagacact
gatggtggctgcccactctttgtgccatctccaggcgtagactctcttcatcagtatgca
cagctgggagagaaactcttagaggagaaccgaggacatccagatgagagcagtgtggat
catatacggatggtgtggaacctctgtgtagctctgtgggggaatctcccggagttcagg
tactcagacactgatgagtacgctgtaagccaggcgcggagggaagctttctccaagtgg
ttgtctgaaaccgcccagccaaagatcaaggaagaagtgcaagagtccaagttcaagaat
caaggtcacttgattgccatcttgagctatttaagcgggaggcagattacagatgcatgt
acattggcacaaaagtcaggtgatcacagattggcactctcattggctcaagcagtcggc
agccatgttgctcggcagatgttggcccggcagttggaggaatgggcagagcttggggca
aatcactttatagatcaagtacgactgaagatctactccctactgtcaggtcaactcgtg
tggtcatccagcacagcggtcaacacatgtgacaacatggactggaagcgagcccttgct
ttgcacctctggtatcactgtaagcccaatgcaactatacctgaagcattggcccagtat
gaagatgccttcaaaagccgcacatcatacggcaaatactccaatgccccactgcctcct
tatctggaagaaaatgacagttacgaagaagaggaggaggtgattgacgaacaagatgaa
catgtggtgcgagacacctgttaccacttgctcaagttgtactgtcagaggggccataga
ctggagaggatcctcaaccccaccacgtcaactgccaaccagttggattaccgtctcagc
tggcatctgtaccaggtgttacagtcgatgtcctaccaccatgtctccccctaccatgct
gcctgtcttcacaccagctttgcagcacagctggaagctctagatctctggcactgggct
gtattttccctgctacatattgaagatccactcagacgagagacagctgtaagatcagta
ttagagcgacatgtgtctctgtcgaagaaccctaagtacttacacaaggaggagtttgtg
agagagaggcttctggttcctcctgcatggatacaccatgctaaggctataaaagcacag
tcagaaaacaaataccatgacgaggcatggcacttactgaaggctgcgcagtggaatgag
ggacacaaggtcatcttggcacacatagctgctgatgctatcataaacgaaaactttgac
tatttgcgtcgttacttagaagagttgtctccccctgagattagctcttctgtgttagac
tggtcgacagggggaaaggtgtttctggactacatcaacttgtgtcaacatttggaggat
ctcaagcagggaacccccagtgcttatgatctggagagactccaaccagccgtcacatcc
ctctgcaacagggtaggcagtctggagtgcaggaattccaaggagaggctttgccaatcc
gagatggctaaaaagtcagccaaccttcttggaactctcctgacattccagtgtgcaggg
tcagcaacaggacgaccaccaacaaggcttgttgcttctcatatcagtggtttgcccatg
ccagaggactacgcccttcaggagctccgagagctgacacgcagccacctgctggagatg
actatgggaacatag
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integrated database retrieval system
