Haliotis rubra (blacklip abalone): 124283038
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Entry
124283038 CDS
T07967
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124283038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124283038
03041 Spliceosome [BR:
hrj03041
]
124283038
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124283038
Spliceosome [BR:
hrj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124283038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
DUF4195
Motif
Other DBs
NCBI-GeneID:
124283038
NCBI-ProteinID:
XP_046575005
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MSKELEVKEKKKKRLLKPEITTSSPDMKKTKSIDSLSSKESVLFHMEEEEVDRNNPHDDL
DVFKTSCNIMRQSVSDINKLKQNKEANAEAIEEKRINASLQFVVLKKLNRLAHFRCRKVR
EGTSEAKQRIDQYHLQLQNLLYEAMHLQKEITKCLEFKSKDEEIELVSVGDFYKEAPPEI
SKPELTKKDKHQRTLARLDWELEQRKQLAAKLKEAQTQKEDITQEIKTKQDHLESLQPKL
QSILQATKPVQGYLGMQYDEVCEQHETAYHLPRPLYVLYMQASAYKEACDTQLKVTIEGD
IDAARSLVTTATPDLDEDSDSDQEEQETSKSKRRRKTVEARQTDKKAKVLRKHPLSVILD
VTTRDGSSLHLTFHYLLVLQIITVNVKVNCGPDTITNSISGGDLLSLDSILNELYPGDHG
NTTPNQANQYELVKQGMHEFSEYLCEVGRPYMWAQWLGGLQFLGDNGLEKAKSSVSASYM
QQTIKKLRRRIKSRLSLLQQLASLERNSIPVSSDVLKNFPAKILSHLMSWQRSTYDDFTS
LPYTKSAISSDMARETDMFFTLTMERGSAKLTSQVIITPDYPAVAPMFVVNITWQTDRNA
GNDIHVKELEEEVNIHYEELVGRKSQGQLLSNQLQRLLMCFDVYLETESHDVSSPVEIPK
EKVFPRTARGPNRKKPYRYMPDLSIFIQR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagagttagaggtaaaggagaagaagaagaagcggctcttgaagccggagatt
acaaccagcagcccagacatgaagaagacaaagtcgatcgacagtctgtcttctaaggag
tcggtactttttcacatggaggaggaggaggtcgaccgcaacaacccacacgatgacctc
gatgtcttcaagacttcttgtaatatcatgagacaatcagtctcggacataaacaaactg
aagcagaacaaagaagctaatgcagaagcgatagaggagaagaggatcaatgccagtctg
cagtttgttgtgctgaagaaacttaaccgcctcgctcacttccgctgccgcaaggtccga
gaggggaccagtgaggccaagcagaggattgatcagtaccacctgcagctgcagaacttg
ctatacgaagccatgcacctccagaaggagatcaccaagtgcctggagttcaagtcaaag
gatgaagagattgagctggtgtcagtgggagatttctacaaggaggcacctccggaaatc
tccaagcctgagctgacaaagaaggacaaacaccagcggaccctggctagactcgactgg
gagctggaacagaggaaacaactggcggccaagttgaaggaggcccagacacagaaggag
gacatcacccaggagatcaagaccaagcaggaccacctggagagtcttcaacccaagctt
cagtccatccttcaggccacgaagccagtgcagggctacctgggtatgcagtacgatgag
gtgtgtgagcaacacgagacagcatatcacctcccccgaccgctgtatgtcctgtacatg
caggccagtgcctacaaggaggcttgtgacactcagctgaaagtgaccatagaaggagat
attgatgctgcaagatcccttgttaccacggcaacaccagacctagatgaggatagtgac
agtgaccaagaggagcaggagacatctaaatcgaagcggaggaggaagacggtggaagcg
aggcagacggacaagaaggccaaagtcctccgcaaacacccactgtctgttatactagac
gtcacaactagagatggcagcagtctccacctgaccttccactacctcctggtcctccag
atcatcactgtcaatgtcaaggtcaactgtggtccggacaccatcacaaactccatctca
ggaggggatctgctgtctctggactcgatcttaaatgaactctaccctggtgaccatggc
aacaccacacccaaccaggccaaccagtacgaactggtgaaacaagggatgcatgagttc
agtgaatacctgtgtgaggtggggcggccgtacatgtgggcacagtggctagggggactg
cagttcctcggagacaacggcttggagaaggccaagagttctgtaagtgccagctacatg
cagcagaccatcaagaaactccgacggcggatcaagtcacgtttgtcactgctacaacag
ctagcatcacttgagcggaactctatcccggtcagcagtgatgtcttgaagaactttcct
gccaagattctgtcccatctgatgtcatggcaacggtccacttatgacgactttacctcc
ctgccttacacgaagtcggccatttcttctgacatggctcgtgagactgacatgttcttc
accctgaccatggagcgcggatcagccaaattgacatcgcaggtgatcatcacgcctgac
taccccgctgtggcacccatgtttgttgtcaacatcacctggcagactgaccgcaatgct
ggcaacgacattcatgtcaaggagctagaagaggaggtcaacatccactacgaggagttg
gtggggaggaagtctcaaggtcagctgttgtccaatcagctgcagcgtctcctcatgtgt
tttgacgtctacctggagacagagtcacatgatgtgtcctcacctgtggagatccccaag
gagaaggtgttcccccggactgccagaggtcccaacaggaagaagccctatcgctacatg
ccggatctcagcattttcatacaacggtag
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integrated database retrieval system
