KEGG   Haliotis rubra (blacklip abalone): 124283414
Entry
124283414         CDS       T07967                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj03013  Nucleocytoplasmic transport
hrj03015  mRNA surveillance pathway
hrj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124283414
  09122 Translation
   03013 Nucleocytoplasmic transport
    124283414
   03015 mRNA surveillance pathway
    124283414
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrj03019]
    124283414
   03041 Spliceosome [BR:hrj03041]
    124283414
Messenger RNA biogenesis [BR:hrj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     124283414
    TREX complex
     124283414
Spliceosome [BR:hrj03041]
 Complex C
  Other components
   EJC/TREX
    124283414
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    124283414
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 124283414
NCBI-ProteinID: XP_046575426
LinkDB
Position
Unknown
AA seq 258 aa
MGDKIDMSLDDIIKLNKKPSRGGRGGQRGGGRGRSVRGAQRGGARRSQRGGGAAGVFRGG
IQRRNRPQNFQRTKEVPDVWQHDMYDGGMGAKRGLVGGRLGGGGGAGASVQQGKLLVSNL
DFGVNDSDIQELFAEFGPLKILKAAVHYDRSGRSLGTAEVIYERRSDGVKALKQYNNVPL
DGRAMNIQLVGQAAGETARPAFTGGNRQGGNYGGRWRWRWPRKQQKSRSQPRKRRFRRKR
PGSGTAENTHSRRAGCST
NT seq 777 nt   +upstreamnt  +downstreamnt
atgggggacaaaattgacatgagtttagatgacattataaagttgaacaaaaagccatca
cgcgggggtcgaggcggtcaaaggggagggggaagaggccggtcagtccgtggggcacag
cgaggcggtgcacgacgcagtcaaagaggtggtggtgctgccggtgtcttcagaggaggc
atacaacggagaaatcgtccacagaattttcaaaggacaaaagaagtaccggatgtttgg
cagcatgacatgtatgatggtggtatgggtgcgaaacgaggtcttgttggaggtcgcctt
ggaggtggtggcggtgcaggagcttcagtgcagcaagggaaacttctagtgtcaaatctg
gactttggtgtaaacgactctgatattcaggaattgtttgctgagtttggtccattaaag
attttgaaggcagcagttcattatgacagatcaggtcgatctctaggtactgcagaggta
atctatgaaagaagaagtgatggagtgaaggccttaaaacagtacaacaatgtacctctt
gatggtcgtgctatgaacatccaactggttggtcaggcagcaggggagacagcaaggcca
gcattcactggggggaacagacaaggggggaattatggcgggaggtggcggtggcggtgg
ccgaggaagcaacagaagtcgaggtcgcagccgaggaagaggaggtttcggaggaagagg
ccggggtcggggacagcagaaaacacccacagccgaagagctggatgctcaacttga

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