Haliotis rubra (blacklip abalone): 124283705
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Entry
124283705 CDS
T07967
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrj03041
]
124283705
Spliceosome [BR:
hrj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124283705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
NRDE-2
PPTA
TPR_11
HAT
Motif
Other DBs
NCBI-GeneID:
124283705
NCBI-ProteinID:
XP_046575674
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MHKVLNALVGVTAHQLKMSANLDKPELEVAPSSEDTAKQAESNQETAMVTESKTEVVAKT
EKTEKESELDKYWKAVKENPNDFTGWTYLLQFVEQENNLKAAEEAYDAFFSHYPYCYGYW
KKYSDMEKKFTDIDRALAVFERGVKAIPLSVELWLHYLNFYITEFGSNEDGEEKIRKLYE
RSITAAGTDFRSDKLWDSYISWENMRHNKKKVTQLYKRLLSIPTQLYSHHYDNFKKHVME
NHPKDILSLDEFLKLRQEVVKAGTVKVDEEDAGAEVPPGEDAPPGVDAPPGEEAVGGMAD
EDEAKKLREWILEHQETIHRLNEDEVSKRWTYEEAIRRPYFHVKPLERAQLKNWREYLDF
EIENGSHERVVVLFERCMIACALYEDFWMKYAKYLEQHNVDGVRSVYQRACTIHLLKKPY
IHLSWAAFEERQGNYPEASDVLSNIEKNVPNLVMVSMRRISLERRQGNHENVENLYQSYI
TKAASPAIRSFYSIKFARYLRKIRGNVEKAREVLSEALEKDKKNEKLFLQLLDLEYQTQP
IEEQRVLDVFSNALKSDLSADFKVKVSQRRMEFLEDFGTCIQRITDAYDEHQKLVKDHNS
DRKKKHPDSIDDNHAPPEKKHKHDKYKSETNGSSATGDASSHHTSADANTYNYHWPSYSN
SYAPYHSHYGAYGSYGSYYPS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaagtgctaaacgcgttggtaggagttacagcacatcagctcaaaatgtcggcc
aacttggacaaaccagaattggaggtagctccgtcaagtgaggacaccgctaaacaggct
gaaagtaatcaagaaacagcaatggtgacagaaagtaagacagaagtagttgcaaagact
gagaagactgaaaaagagtctgagctggacaaatattggaaggcagtgaaggagaaccct
aatgacttcactggttggacgtacctgctgcagtttgttgaacaagagaacaacttaaaa
gcagcagaggaggcttatgatgcattcttcagtcactacccatattgctatggttactgg
aagaaatacagcgatatggagaagaaatttactgacattgaccgagctttagcggtgttt
gagcgtggagtaaaggctatcccattgagtgttgaactatggctgcattacctcaacttc
tacatcactgagtttggttccaatgaagatggggaggagaagatacggaaactttatgag
aggtcaatcacagcagctggcactgacttccgctccgataaactctgggactcctatata
tcctgggaaaatatgcgacacaacaagaagaaagtgacacagttatacaaacgattattg
tcaattcccacacagctatacagccatcactatgacaatttcaagaagcatgttatggaa
aaccacccaaaggatatcttgagtctggatgagttcttgaagttgcggcaagaggttgtc
aaggccggcactgtgaaggtagatgaggaggatgctggtgctgaggtcccacctggggag
gatgcaccccctggtgtggatgcaccaccaggggaagaagctgtgggagggatggctgat
gaagatgaagccaagaaactgcgagagtggatcttggaacaccaagagacaatccacaga
ctgaatgaggatgaagtcagcaagagatggacttatgaggaagctattcgtcgcccatat
ttccatgtgaaacctctggaaagagctcagctgaagaactggcgggaatacttggacttt
gagattgaaaatggatcccatgagcgagtggttgtgctgtttgagaggtgtatgatcgca
tgcgcactttatgaagacttttggatgaaatatgccaaatacctagaacagcacaatgta
gatggggtaaggagcgtgtaccagcgtgcctgtacaatccacctgctgaagaagccgtac
attcacttgtcttgggctgcatttgaggagagacaaggcaattacccagaggcaagtgat
gtcctgtcaaacattgagaaaaatgtgccaaatcttgtaatggtgtcaatgcgacgaatc
agtctggagcgtcgccagggcaaccatgaaaatgtcgagaacttgtaccaatcctacatc
accaaagctgcatcaccagccatcagatctttctactcaatcaaatttgcacgctatctg
aggaagattaggggtaatgtagagaaagcacgagaagtcttgtcagaagccctggaaaaa
gataagaagaatgagaagttgttcttacagcttcttgaccttgagtatcagacacaacca
attgaagagcaacgagtcctggatgtgttcagcaatgctctcaagagtgacctgtctgca
gattttaaggtgaaggtttcacagaggagaatggagttccttgaagactttggtacctgt
attcagagaataacagatgcctatgatgaacatcaaaaacttgtgaaagaccataatagt
gatagaaagaagaagcacccagattccattgatgataatcatgcacctccagagaagaaa
cataaacatgataaatacaagtcggagacaaacggcagtagtgcaacaggagatgcctca
agtcatcacacatcagctgacgccaacacctacaactaccattggcccagctactcaaat
tcatatgccccctaccactctcactatggagcgtatggatcatacggctcctactaccca
tcgtag
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