Haliotis rubra (blacklip abalone): 124283931
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Entry
124283931 CDS
T07967
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03018
RNA degradation
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124283931
09123 Folding, sorting and degradation
03018 RNA degradation
124283931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124283931
03041 Spliceosome [BR:
hrj03041
]
124283931
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124283931
mRNA degradation factors
5'-3' decay
Lsm complex
124283931
Spliceosome [BR:
hrj03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124283931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
124283931
NCBI-ProteinID:
XP_046575924
LinkDB
All DBs
Position
Unknown
AA seq
138 aa
AA seq
DB search
MLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVIQKNKGRGDMRGRGGQRGRGRGAFSAGGRGGRGGGGG
GRGGGGGGQQKPGKGRGN
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgttacccttatcacttctaagaactgctgtcaaccacccgatgctggttgagttgaag
aatggcgaaacgtacaatggacatcttgttagctgtgataactggatgaacataaacttg
agggaggttatctgcacatctcgggatggtgacagattctggaggatgccagagtgctac
attcgaggaagtacaatcaagtacctcagaatccctgatgaggtcatcgacatggtgaag
gaagaggtcatccagaagaacaaaggtcgtggcgacatgcgagggaggggaggacagcgt
gggagagggagaggtgcattctcagctggaggccgaggaggtcgtggtggtggtggtgga
ggtcgaggaggtggtggtggaggtcagcagaagccagggaaaggccgcggcaactga
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integrated database retrieval system
