Haliotis rubra (blacklip abalone): 124284323
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Entry
124284323 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: F-box only protein 38-like
KO
K10313
F-box protein 38
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124284323
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124284323
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_At5g56370
LRR_R13L1-DRL21
F-box
LRR_RPS2
LRR_14
F-box-like
Motif
Other DBs
NCBI-GeneID:
124284323
NCBI-ProteinID:
XP_046576358
LinkDB
All DBs
Position
Unknown
AA seq
1619 aa
AA seq
DB search
MAMEYTCNSSNLIEKHEKMTLSDLLNCFSEMRQRDEIAAEMEREKSQAFLSSSDFFNHLS
LEIICHVLNYLPLRDVLKMEQQCKKIQKAVSMHLKVRKSIDFTEGEIYGWIPASLNDSML
AKLISRCVELVSIYGFHSQLILKRRQRGADMLTIPGIIAALSSAKXLKAVEVSDINLMEA
ILNYLPRLEILGIFKNRNAAFPINPSNKLTLTSNPRITSLHLSGVVISELPRMSHVKHIY
LRWVKITHSHPFRDFAVPSLQSFVMSNCAGPSSTLKYVPLITGLAAARSLTRLELVRVPF
LGGLIQHIVEDSWRVSGFSQLQTVMFGACKHAQEVDLGYLMITAAHCLEELSIQPSLTKD
SLFAAIKMADVTFPVFETLHLGYVDPFPEAGKWNQDDLVMIHGLAEVSENPAMITDIGMK
AIGQCFSFLRNLEIYNCPHLHFPMSWFTSGAESLSHLRHLHLRRCHALRLQDFCHFIEHL
PQLELLHLEFMFREPPKGCARVGLSAGTGLGVSSALVQNNGNDAGNLDGGNHNNDDGDLN
QDGNNNNADAGAMAANGGDINNNEPPNQNPDNIEPHIDLDDDPLDEDDEFDDFSDNGDDL
DFDGLSGDEENIDMANHIGDDIRILSVVANEGSGNRSHEEEEHPETSKKASQSKIKPPEK
DDSKPGSSKEDVNNPQPSTSRVYCGGMPSGSCMKREVNIVPSVDSRSTCQLVDIDIGNGS
DTDIECPADGKIKVKVECNSTIELRSKDDALVTEPKFVSSSSLSGAQRDLGEACPSTSRA
SGTMCAASQGTKASSSGTSDCVQGIKANSKHTSATGEEVKETTSCMSASVQEVKATTSAT
TSCVQRIQATSSATSAHVQGTKETASATSASVQVFKDKKKNQNPSVKNEKPCSSVPCKSA
GSVHAADKNATEVKETEEHICSPAKKKKKTCSKNKDEHIDKRSDKSHSDCRGKCEYADHA
SCCSKWARPSEQDCHKTTEQHCSKDRHIDSPIAPPSAPTSSTAGRQHGRTCSHLESSQPV
ASSSGVVKSSSANSHVDLIRKKPVSNLPKSVNRRTASCSVSDSATNRKKCSETKGKMSHS
THSKLGKSSSSSQREPTGDTTESSSDESSVNETVDNTEIVRKKKQPVDNKKTSSQTSSPE
PSTSKNSWDKASVESEPDNRTVDEFLDDIAKDYHNDLSASKIAGDDNMYLFTPEEVEAMD
FGKENPGEEDKDDDTKGYNMRPRKRGKSLTGKKKGLVKKTKEAXQFVKANPNMHDKCCQA
VSDEIRETTKRAKEQEEARQGAASAPSSKGGNCCGKRTTKNRSVVHESVSSSRDEAQRLK
LGLRKKTNMCDKATSTSDPVIEDDHIQVLSLRSKSLLCVTLHMVGVTDVIIDECPNLKLL
RGSACRVLKKVTVGGAPKLSKVSFAQCRKIDEMHLVNEVCDQISMTNRVIFLRPMRQFDM
FAFENMLFCQPDIDYHLCVIYDYSPDPTHTMYNHARVATWLDLFSGTNMELLRFMDFEQA
KNFPVDDDDEEKKCYRNAYILHGYNDNGSKWTLSTDIPWLDHLSQCPDIDSPDLHPDDYK
EGIYCPRRKGHHVMTDCLMDLQDVISEMRHKSVSLYCYSVIVYVNMCDVTGTPTPDMYL
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggctatggagtacacatgtaacagtagtaaccttattgaaaagcatgaaaaaatgact
ttgtcagatttattaaattgcttcagtgaaatgagacaaagagatgaaatagcagctgaa
atggaaagagagaagagccaagcttttctcagtagttctgatttctttaatcatctgtca
ctggagatcatatgtcatgtactgaattacctccctttgcgagatgtgctaaaaatggag
caacagtgtaagaagattcagaaggctgtttcaatgcatctcaaagttaggaagtcaatt
gattttactgaaggggaaatatatgggtggattcctgcaagtctgaatgattccatgctg
gccaagctgatatcaagatgtgtggaacttgtgtcaatatatggttttcactcacagctg
attctcaagagaagacaacgaggtgctgacatgttgactattccaggaattattgcagcc
ttgtcatcagccaagnnattgaaagctgtggaagtgtctgatatcaacctcatggaggct
atcttgaattatcttccacgcttggaaattctgggaatattcaaaaacagaaatgctgca
tttccaatcaatccatctaataaacttactctgacatctaacccaaggattacgtccctt
catttgtctggagttgtgatttcagaactacctcgtatgagtcatgtgaagcatatttat
ctccgttgggtaaaaatcacacattcacatccattccgtgacttcgcagttccaagcctg
cagagttttgtcatgtccaactgtgcaggtccttccagtacattgaagtatgtgcccctg
ataacaggcctggctgcagcaaggtctctcacccggctagagctagtcagagttccattt
ctaggagggctgatacagcacattgtggaggacagctggcgagtcagtggcttctcccag
ctgcagactgtcatgttcggagcctgcaaacatgcacaggaagttgacctcggctacctc
atgatcacagctgcccattgcctagaggagttgagcatccagccttctctcacgaaggac
agtttgtttgctgccatcaagatggccgacgtcacattcccagtctttgagactctacat
ctgggttatgtggaccccttcccagaggcgggcaagtggaaccaggatgacctggtgatg
atccacggcctggctgaggtttctgagaaccctgcaatgatcactgatattgggatgaag
gccattggccagtgcttttccttcctccgcaacctggagatctacaactgcccgcacctc
catttcccaatgtcgtggttcacttcaggtgcagagagtctgagtcacctacgacacctt
catctccgccgctgtcacgctctccgactccaagacttctgccacttcattgaacacctg
cctcagcttgagctactgcacttagagttcatgttcagggagccacctaaaggatgtgcg
agagtgggcctgagtgctggtactgggttgggtgtatcctcagctcttgtccagaacaac
ggcaatgacgctggtaacctcgatggtgggaatcacaacaatgatgatggggaccttaac
caggatggtaacaataacaatgcagatgccggggccatggctgctaatggaggggacatt
aacaacaatgaaccgcccaatcaaaatccagataacattgaaccccacattgatctagat
gatgatccattggatgaggatgatgaatttgatgatttttctgataatggagatgatcta
gattttgacggattgagtggtgatgaagaaaacattgacatggccaatcacattggggat
gacattcgaatattgtcagtggtagccaatgagggatcgggtaacagatcccatgaggaa
gaagagcacccggagaccagcaagaaagccagtcagtccaaaatcaagccacctgaaaag
gatgacagcaagccaggatcaagcaaagaagatgtgaacaacccacagccaagcacaagt
cgagtctattgtggcggaatgccttcaggaagctgtatgaaaagagaagtaaatattgtc
ccttctgttgattcaaggtcaacttgtcagcttgttgatattgacatcggtaatggcagt
gatacagatatagaatgtccagcagacggcaagatcaaggtgaaggttgaatgtaacagc
accattgaacttcgatccaaggatgacgctctggttactgaaccaaagtttgtgtcctca
tcttctttgtctggagcccagagagacctaggtgaggcatgtcccagtacgtcacgagcg
tcaggtacaatgtgtgctgcttcacagggaactaaagcatcttccagtggcacgtctgat
tgtgttcaaggaatcaaggcaaattcaaaacacacatctgccacgggtgaggaagtcaag
gagaccaccagttgcatgtctgctagtgtacaagaagtcaaggcaacaaccagtgccaca
actagctgtgttcaaaggatccaggcaacctccagtgccacgtctgctcatgttcaagga
accaaggaaactgctagtgccacatctgcaagtgttcaagttttcaaggacaaaaagaaa
aatcagaatccaagtgtaaaaaatgaaaagccgtgtagtagtgttccctgcaaatctgca
gggagtgttcatgctgctgacaaaaatgcaactgaagtaaaagaaacagaagaacacatt
tgtagcccagctaaaaagaagaagaaaacttgttctaagaacaaggatgaacatattgat
aaaagaagtgacaagtcacattcagactgcaggggcaaatgtgaatatgcagatcatgct
tcttgttgctcaaagtgggcgagaccatcagagcaagattgtcataagactactgaacag
cactgttcaaaggaccgccatatagattcgcctattgctccacctagtgctccaacctcc
agtactgcaggcagacagcatgggaggacttgtagccatcttgaatcatctcaacctgta
gcttcttcatctggtgtagtgaaatcatcgtcagccaattcacatgttgatctcattaga
aagaaacctgtttcaaacttaccaaaatcagtgaatcgaaggactgcctcttgttctgta
tctgactctgctacaaataggaagaagtgttcagagacaaaagggaagatgtcacattcg
acacacagtaagcttggtaaatccagttcttccagtcagcgtgaaccaacaggcgataca
acagagagttccagtgatgagagttcagtgaatgaaactgtggacaatactgaaatagtt
cgaaagaagaaacagccagttgataacaagaagacaagctcacaaaccagttcccctgaa
cccagtacatcgaaaaactcttgggacaaagcttccgtcgaaagtgaacctgacaatcgt
acagtagatgagtttctagatgacattgctaaagactatcacaatgacctgtctgcctcc
aaaatagcaggtgatgacaacatgtatctgtttactccagaggaagtggaggcaatggac
tttgggaaggagaaccctggtgaagaagacaaagatgatgacacaaagggttacaacatg
aggccaaggaaacgggggaagagtctcactgggaaaaagaaaggtcttgtgaaaaaaacg
aaggaagcttgacaattcgtgaaggcaaatccaaatatgcatgataaatgctgtcaggca
gtcagtgatgaaatacgtgaaacaaccaagcgtgccaaagagcaagaagaggctcgacaa
ggagctgcttcagctcctagttcgaagggaggcaactgctgtgggaaaaggacaaccaaa
aatagatcagttgtgcatgagagtgtatccagttccagggatgaggcacagaggttgaaa
ctgggactgcggaagaaaaccaacatgtgtgataaggctacaagcacgagtgacccagtc
atagaggatgaccatattcaggtgctgtctctgagatccaagagtctgttgtgtgtcacg
cttcacatggttggggtgactgacgtcatcattgatgagtgtccaaacctcaagctactc
cgaggaagtgcttgtcgtgtgctgaagaaagtgacagtaggtggggctcccaagttgtct
aaggtgtcatttgcccagtgtcggaagatcgatgagatgcaccttgtcaatgaagtctgt
gatcagatcagcatgaccaacagagtgattttccttcggcccatgagacagtttgacatg
tttgcctttgagaacatgctattctgccaacctgacatcgactaccacctgtgtgtcatc
tacgactacagccccgatcccacccacaccatgtacaaccacgcccgcgtggccacatgg
cttgacctgtttagtggcaccaacatggagctgttgcggtttatggattttgaacaagcc
aagaacttcccagtggatgatgacgatgaagagaaaaaatgctacagaaatgcctacatc
ttgcatggctacaacgacaatggcagcaagtggacgctgtcgacagacatcccctggctt
gatcacctgagtcagtgtccggacatcgacagccccgaccttcatcctgatgattataaa
gagggaatctactgtcccagacggaagggccaccatgtgatgacggattgcctcatggac
ctacaggacgtcatctccgagatgagacacaaaagcgtcagtctctattgctactctgtc
atcgtttatgttaacatgtgtgacgtcacaggaacacccactcctgacatgtacctgtaa
DBGET
integrated database retrieval system
