Haliotis rubra (blacklip abalone): 124284436
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Entry
124284436 CDS
T07967
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
3.6.4.13
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03013
Nucleocytoplasmic transport
hrj03015
mRNA surveillance pathway
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124284436
09122 Translation
03013 Nucleocytoplasmic transport
124284436
03015 mRNA surveillance pathway
124284436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124284436
03041 Spliceosome [BR:
hrj03041
]
124284436
03009 Ribosome biogenesis [BR:
hrj03009
]
124284436
03012 Translation factors [BR:
hrj03012
]
124284436
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124284436
mRNA cycle factors
Stress granule specific factors
124284436
Spliceosome [BR:
hrj03041
]
Complex C
Other components
EJC/TREX
124284436
Ribosome biogenesis [BR:
hrj03009
]
Eukaryotic type
90S particles
Helicases
124284436
Translation factors [BR:
hrj03012
]
Eukaryotic type
Initiation factors
eIF-4
124284436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25
AAA_22
UvrD-helicase
AAA_30
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
124284436
NCBI-ProteinID:
XP_046576473
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MASRRVLPDDLRNVEFETSEDVDVTPTFDNMGLREELLRGVYAYGFEKPSAIQQRAVKPI
VKGRDVIAQAQSGTGKTATFSISILQCLDTQVRETQALILSPTRELATQIQKVILALGDY
MNVQCHSCIGGTNIGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKMLILDEADEM
LNKGFKEQIYDVYRYLPPATQVLLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIK
QFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMP
QKERDSIMKEFRSGSSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG
RKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcggcgtgtgctccctgacgatttaagaaatgttgaatttgaaacaagtgaa
gatgtcgacgttacgcctacatttgataatatgggtctcagagaagagttgttgaggggt
gtatatgcttatggttttgagaaaccgtcagcaattcaacagagagctgtgaagccaata
gtgaaaggtcgagatgttattgcacaggcacagtctggaaccggaaaaacagccacattt
tccatcagtattctccagtgcctggatacacaggtgcgggagacgcaagcccttattctc
tcgcccaccagagagcttgctactcagatacagaaggttatccttgcccttggagattat
atgaatgttcagtgtcattcatgtattggaggtacaaatattggtgaagacatccgtaag
ctggactatgggcaacatgtggtttctggaacaccaggcagagtctttgatatgatcaga
aggaggaatcttcgcacaagatccataaaaatgttgattcttgatgaagccgatgaaatg
ctcaacaaaggattcaaggagcaaatctacgatgtgtatcggtacctgccaccagcaaca
caagtacttctcatctctgccacacttcctcatgagatcctggagatgacaagcaagttc
atgacagaccctatcagaatcctagtcaaacgtgatgagttgaccttggaaggcatcaag
cagttcttcgtggcagtagagagggaggagtggaagtttgacacgctctgtgatctgtac
gacaccctcaccataacacaggcagtcatcttctgtaataccaaaagaaaggtggactgg
ctgactgagaagatgagggaggccaacttcactgtgtcatccatgcatggtgacatgcct
cagaaagagagagattccattatgaaggagttcagatcaggatccagtcgtgtcctcatc
acaactgatgtttgggcccgaggtattgatgttcagcaggtgtctctcgtcatcaactat
gatctgccaaacaacagagaattgtacattcacagaattggacgatcaggtagatttgga
aggaaaggtgtggccatcaactttgtgaagaatgatgacatcagaattctgagagatatt
gagcagtactactcaactcaaattgatgaaatgcccatgaatgttgctgatctgatctaa
DBGET
integrated database retrieval system
