Haliotis rubra (blacklip abalone): 124284639
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Entry
124284639 CDS
T07967
Name
(RefSeq) transcription factor SOX-7-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124284639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrj03000
]
124284639
Transcription factors [BR:
hrj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124284639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Sox17_18_mid
Motif
Other DBs
NCBI-GeneID:
124284639
NCBI-ProteinID:
XP_046576701
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MRQACHPPQNPGPTPAMLAGMYGNPHGPGMPHPQFQFDWVNSYTTGVMPQESTMVRMPSR
RSEQRIRRPMNAFMVWAKVERKKLADENPDIHNADLSKILGKKWKGLRVEEKRPFVEEAE
RLRVQHMQDHPDYKYRPRRRKHPKRICKRASSLTSSGDARPDSLPPVTTFGRGSTPGGGS
NMRKQMTTPHTGASLSAPILSNLLNTPESSPPSSPDTSKPRNSSSPDLTDDQTGRSSANS
SHYESVLTSSGLLTPDRSPNDAGESVFKFPPHSEDSRLSGTQGSSYSELLRKFSTNGNMY
ISRFRNDYTPVPTSTNLNSSSENLVTLRKLVSQPHTTMSSSYYRQKSSARMQQTSLKSNM
ATPSPYPSCRQQVAPYPQTSTHLPEGDILEKFSEVERLGDVDRSEFDQYLFGSSSQTNPN
TNSYCRAGVTYKYSSVSYDQVASSPEYDPGSNEVSPAGEHNEDMGSDYDVAYQYDFDGSC
LISALTNSPSF
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaagcgtgtcacccacctcagaatcctggacccacaccagcgatgttggcaggg
atgtatggcaacccacacgggccaggcatgccccacccacagttccagtttgactgggtt
aacagctacactacgggggtgatgccccaagaaagcaccatggttagaatgccctccaga
agatctgagcaaagaatccgaagacccatgaatgcatttatggtttgggcaaaagttgaa
agaaagaagcttgcagatgaaaaccccgacatacacaacgcagatctcagtaaaattcta
ggaaagaaatggaagggccttcgtgtggaagagaagcggccatttgttgaggaggcagag
cgactgagggtccaacacatgcaggaccacccagactacaagtacagaccccggaggcga
aaacatcccaagagaatctgcaagagggcgtcatctctcacgtcatccggcgatgctaga
cctgacagtctccctcccgtcacgacgttcggtcgggggtccacgcccgggggtgggtcg
aacatgagaaaacaaatgaccacacctcacaccggggctagcctctcagcccccatcttg
tccaatctcctcaacacacccgaatcatcaccaccttcgagcccagacacttctaaacca
cgaaactcatccagtccagacttgacagacgatcaaaccggacggtcgtctgcgaacagc
agccattatgaaagtgttttgacttccagtggacttttgacgcctgatcgttcgccaaat
gacgcgggggagagtgtgttcaaattcccgccacacagcgaagacagtcgactgagcggg
actcaagggtcatcatattcagaactattgcggaaattcagtacaaacgggaatatgtac
attagtcggttccggaacgactacaccccagtccccaccagcaccaacttgaactcgtcc
tcagagaacctcgtcaccctccgtaagctagtgagtcagccccacaccaccatgtctagc
tcctattatcgtcagaagtcgtctgcacgaatgcagcaaacaagtttgaagtcaaacatg
gccacacccagtccctacccctcctgccggcaacaagtggctccttacccccagacaagc
acccacctcccggagggggacattctcgagaagttctctgaagtcgagagacttggcgac
gtcgatagaagtgaatttgaccagtatttattcggctcgtcttcccagaccaatccaaac
acaaacagctattgccgcgctggtgtgacgtataagtacagttcagtctcttacgatcaa
gtggcgagttcgcccgaatacgaccccggttcaaatgaggtctcgccagcgggagaacat
aacgaagacatgggctccgactatgacgtcgcctatcagtacgacttcgacgggtcttgt
ctcatatctgcattgacaaactccccatctttctga
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