Haliotis rubra (blacklip abalone): 124285011
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Entry
124285011 CDS
T07967
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124285011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrj03021
]
124285011
03036 Chromosome and associated proteins [BR:
hrj03036
]
124285011
Transcription machinery [BR:
hrj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124285011
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124285011
PBAF complex
124285011
GBAF(ncBAF) complex
124285011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM-assoc_3
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
124285011
NCBI-ProteinID:
XP_046577111
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MAVLQRKKDGAPNAKFFEAVETIAQFDSARTWLHKNCKRYTQADPPTNKGLSSLVIQLLQ
FQEDAFGKSQTNPALTKLPMKCFLDFKAGGGLCQIFAAVFKFKSDQGWRRFDFQSPSRMD
RNVEMFMQIEKALVSSKCLPPPSIFIRPDVDKILIPKLKDIIKRHQGTMCDNADDATHIV
HTLPSHPPPNDEYFRPVLKRDRHCLVHWWYYPDSYDTWVTDTNIDYEPDSPYSHQGAFEV
SARWLLDLEEFNEWMNEEDYLVEDEFNADGSNKKYKKSNRLKLTVEDLNNPDPDRRDKKD
KKGKRKRSPSPVPEKKKRKSGRTPGLSSTKKRSARDEEEEDLTKDMEEPTPEPNIQEVAI
AKQATGSRSQKDSELQPIKGGTLMDIEEDQGDKVEPERAETGSTTDEGSKKDKEDQEDNL
TEQTHHIVIPSYSAWFDYNSIHAIERRALPEFFNGKNKSKTPEIYMAYRNFMIDTYRLNP
TEYVISTACRTSTANNEQEELWLKMQNVMTAAIMRVHAFLEQWGLVNYQVDTDTRPTPMG
PPPTSHFHILADTPSGLQPINPPKTNQPPAAQQIMDFSEKTEDKEDDKRDMSKFGLRMDI
YAKKALKDKSAASRMREWTDQETLLLLEALEMYKDDWNKVCEHVGSRTQDECILHFLRLP
IEDPYLEEDYQQLGPLTYQPIPFSQSGNPIMSTVAFLASIVDPRVASAAAKSALEEFSKM
KDEVPPTLIDAQSKMIEEATKEGKAVDASFCLEKSGIAGTAPEKEEGGIKEPAEPLNGEE
AKPAEPEETKKEIKEEKKDESSEEAMETDSTDVVTKKEKEDKEETEEKKDKEEKEKEESK
PEDESEKPEDKEATDKKEGEKEEEGKELEKVDKVKDGKDGNIATAAASALAAAAVKAKHL
AAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLQERQQFHM
EQIRAAEYRARQIAMQQLASEQRQQQAQQQGGDAGAGSSGGANAAVQNPTLAAAVGQGNY
PMHGSPMPPQGPQVQQAHQVSSGSPAPPQSSSQPATPQQLTPTPPQTQSPHPQGPQASAA
ASASTPESAPRTVPLPADDGASSAATLLHPFSRSTAVLHSVTRTPGTAPAELPPARPPGP
TTSTLPAAQPRSDGALPPRTATASATTTATTTRVLPATLARKRVGTTTSGATTLQMMNLS
IRQIFSSEYVHFSVSASNLIHFHVTSVDHYKLFCIFLWLYSQKLEYRV
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctccaaagaaagaaagacggtgctcctaatgccaagttttttgaagccgta
gagactatcgcacaatttgatagtgcaagaacatggttgcacaagaactgcaaaaggtac
acacaggctgatccccccaccaacaaaggcctgtcaagtctcgtcattcagctattgcag
tttcaagaagatgcctttggaaaatcccaaacaaacccagcacttacaaagttgcctatg
aagtgtttcctcgacttcaaggcaggaggtggactttgtcagatttttgctgctgtcttc
aaattcaaaagcgaccaaggatggagacgattcgacttccagtctccatcccgaatggac
aggaacgtggagatgtttatgcagatcgagaaggctctcgtctccagcaaatgcttgcca
cccccctccatcttcatccgccctgacgttgacaagatcctcatccccaaactcaaggac
atcatcaagagacaccagggaacgatgtgtgataatgctgacgacgccacacacattgta
cacacgctgccatcccatcctccacctaatgatgaatatttccgaccggtgctgaagagg
gatcgtcattgcttggtacattggtggtactaccctgacagctatgatacctgggtgacc
gataccaacattgactacgagccagactcgccatactctcaccagggtgccttcgaggtg
agtgcaagatggctgctggacttggaggaattcaatgaatggatgaatgaagaggactat
ttggttgaagatgaattcaatgctgatggcagtaataagaagtacaagaaatcaaacaga
ttgaagttgacagtcgaagatttgaacaaccctgaccctgaccgaagagataagaaagac
aaaaaaggaaagaggaaacgatcaccatcacctgtgccagagaagaagaagaggaagagt
ggacggacaccaggcctcagttcaactaagaagaggtcagctcgagatgaagaggaggaa
gatttgaccaaagacatggaggaacctacaccagaacccaacatccaggaggttgccatt
gccaaacaagctactggatcgcggagtcagaaggacagtgaactgcagcctatcaaggga
gggacactgatggacatagaagaggaccagggggacaaggttgagccggagcgggcggag
accggatccacgacagacgaggggtctaagaaggacaaggaggaccaggaagacaacctg
acggaacagactcaccacatcgtcattcccagctactcagcctggttcgactacaacagc
atccacgccatcgagcggcgagcgctgcctgaattcttcaatggaaagaacaaatcaaaa
actccagaaatctacatggcatatcgtaacttcatgattgacacatatcgcctcaacccg
acggaatatgtgatcagcacagcctgcaggaccagcactgccaataatgagcaggaggaa
ctctggctgaaaatgcagaatgtcatgacagctgcaataatgagagttcatgccttcctg
gaacagtggggtctagtcaactaccaggtggatacggacactcgccccacccccatggga
cccccacccacgtctcacttccacatcctggcagacaccccctctggtctgcagcccatc
aacccacccaagaccaatcagccaccagcagcccagcagatcatggacttcagtgagaag
accgaggacaaggaagatgacaagagagatatgagcaagtttggtctccgaatggacatc
tatgctaagaaagccctgaaggacaagagtgctgcatcgcggatgcgtgagtggacagac
caggagacgctgctgttactggaggcgctggagatgtacaaggacgactggaacaaggtg
tgtgagcacgtcggcagccgtacccaggacgagtgcatccttcacttcctgcgtcttccc
atcgaggacccctacttggaggaagattaccagcagctgggaccactgacataccagccc
attccattctcccagagtgggaatcccatcatgtctaccgtggctttccttgcttccatc
gtagaccccagagttgcaagtgcagctgccaagtcagccttagaggagttctctaagatg
aaggatgaggtcccaccaacgctgatcgatgcccagtctaagatgatcgaggaggcaaca
aaagaaggcaaggcagttgatgcctccttctgtctggagaaaagtggaattgcaggaact
gcccctgagaaagaagaaggtggtatcaaggagcctgcagagcccctgaatggggaagaa
gccaaacctgctgaacctgaggagacaaagaaggaaataaaagaagaaaagaaggatgag
tctagtgaggaggcaatggagacagacagcactgacgtggtgacgaagaaggagaaagag
gataaggaagagactgaagaaaagaaggacaaggaggagaaagaaaaagaggagtcgaag
ccagaagatgagagtgagaagcctgaagacaaggaagctactgataagaaggaaggagag
aaggaggaagaagggaaggaattagagaaggttgataaagtcaaggatggcaaggatggc
aacatcgccacagctgccgcctctgctcttgcagcagctgccgtcaaggcaaagcacctg
gctgctgtggaggagaggaagatcaagagcctggtggcgctgctggttgagacacagatg
aagaagctggagatcaaactgagacactttgaggaacttgagacaatcatggacagggag
agagaagcgctggagtaccagagacagcagctcctgcaggagaggcagcagttccacatg
gagcagatcagggcagcggagtacagggccaggcagattgccatgcagcagctggcgtcg
gaacagagacagcagcaggcccagcagcagggaggggatgccggtgctggttcctccggt
ggagctaatgccgcagtgcagaaccccactctggcagctgctgtgggtcagggtaactac
cccatgcatgggtcacctatgcctccccagggcccacaggtacaacaggctcatcaggtg
tcctcgggctcgcctgctcctccccagtcctcctcccagcctgctacgcctcaacagtta
accccgacacccccacagactcaatcaccccacccccagggacctcaagcttcggcagca
gccagtgcatcaacccccgagtcagccccccggacagtccccctaccagcagatgacggg
gccagctcagcagcaaccctactccaccccttctcccgctccacagcagttctccactca
gtcaccaggaccccagggacagccccagcagagctacccccagcccggcccccagggccc
accacctcaaccctaccagcagcccaaccccggtcagatggcgccttaccaccaaggaca
gcaacagcctccgccacaacaacagcaacaacaaccagggtccttccagccacacttgca
agaaagcgggtcggaacaacaacctcaggtgccaccaccctccaaatgatgaatctcagc
atccgtcaaatcttttcatctgaatatgtacacttcagtgtttctgcatcaaacttgata
catttccatgtcacttcagtagaccactacaagttgttctgtatttttctctggttgtat
tcgcaaaagttagaatacagagtataa
DBGET
integrated database retrieval system
