Haliotis rubra (blacklip abalone): 124285374
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Entry
124285374 CDS
T07967
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04137
Mitophagy - animal
hrj04140
Autophagy - animal
hrj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124285374
04137 Mitophagy - animal
124285374
04148 Efferocytosis
124285374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrj03000
]
124285374
Transcription factors [BR:
hrj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124285374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1a_CTAD
PAS_9
HIF-1
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
124285374
NCBI-ProteinID:
XP_046577552
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MTSKDKKRNSDKRKEKSRDAARCRRSKETEVFYELAQNLPLPSSVSTQLDKASIMRLTIS
FLKICKIREEKQWHDDEEQCEDGEIQKRLHQMYPKALEGFVLILSREADIVYLSENTAKY
LGIQQIELMGQSIFDFTHPCDHEEIRDMMSDRPHGSKAVSEERTLFIRMKCTLTSKGKSV
NLKSATYKVIKCTGRLVVAKTKSKKDSDDASMYPYLLAVGEPIPHPANIEVPLDSSTFLS
KHNMNMSFTYCDDRIQDLIGYNNENLIGKSLYNYHHALDSEIVEKAFKDLFAKGQTMTGQ
YRFLAKNGGYAWVITQGTIIYNNRTQKPQWVVCVHYVLSAIQEKNMILSEVQQQTAEDLL
SFKMEQSTDKIFGPRTKDMEQNYFVPEELKNNITLVNNEPADLSYLAPTAGDGCVQLGYP
VYSQVADFACMDKDLPPPMCKEEPDPVPRDVHRNQEFNSNNPSPASLSPRIQSPDEYQTI
ASPTDVDLMDKFFSTMDTTQKGGSDSDMEDVDLNMRAPYIPMNADEDFSLVPPSTDSLFS
LQNDFNPGLFGRTESVFMDKNAFEIPRRPMQPSVRDMIGGSTVVASIEQPPDTMLLQVKR
PLDMNSLEKGPPVAKAVKRNDPRPLLGVMPTPSRQFQRLFLPPPPMRSMIPGKSCRFSVN
PFCLPEGLPSKESVLLNLLLTGEDRNHGYKVNSSLQRMHGLKHNLFTDLTRQDCEVNAPT
QSHHLLQGEDLRSALDADCRLNKRNMTAAM
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaaagacaagaaaaggaacagcgataagagaaaggagaagtccagagatgcg
gcaagatgtcgccgcagcaaagagacggaggtgttttacgagttggcccaaaatctgccg
ttgccaagcagcgtgagcacccaactggacaaggcctccatcatgaggcttaccatcagc
ttcctgaagatctgcaagatcagagaggagaaacagtggcatgatgatgaagaacaatgt
gaagatggtgagattcagaagcgtcttcatcagatgtacccaaaagccttggagggattt
gtcctcatcctctctcgggaagctgatattgtatacctgtctgaaaacacagccaagtat
ctcggcatccaacagattgaactgatgggacagagcattttcgacttcactcacccatgt
gaccatgaagagatccgtgacatgatgtcagatcgccctcacggctccaaggcagtgtcc
gaggagcgcacgctcttcatccgcatgaagtgcacgctgaccagcaagggcaagagtgtc
aaccttaaatcagcaacatacaaggtgatcaagtgcacaggaaggctggttgtggccaag
acgaagagcaagaaggactctgacgatgcctccatgtacccctacctgctggccgttggg
gagcccatcccccaccccgcaaacatcgaggtcccccttgacagcagcacttttctcagc
aaacacaacatgaacatgagcttcacctactgtgacgacagaatccaggacctgattgga
tacaacaatgagaacctgattggcaaatctctctacaactaccatcatgcactagacagt
gaaattgtggagaaagctttcaaagatctgtttgccaagggacaaactatgactggtcag
tatcggttcctggccaagaatggaggctacgcctgggtcatcacacagggaactatcatc
tacaacaaccgcacacagaagccccagtgggttgtgtgcgtccactatgtcctcagtgcc
attcaggagaagaacatgattttgtcagaagttcagcagcaaacagctgaggacctcttg
tccttcaagatggagcagagcacggacaagatattcggacccaggacaaaggacatggag
cagaactactttgttcctgaggaactcaagaacaacataaccttggtcaacaatgagcct
gctgatctgtcctacttggcccctacagctggagacggctgtgtccagctcggataccct
gtctactcccaggttgctgatttcgcatgcatggataaggatttgcctcctccaatgtgt
aaggaggagcctgatcctgtacccagagacgttcaccgcaatcaggagttcaacagcaac
aacccctcacctgcatcactgtcacccaggattcagagccccgatgagtaccagacaata
gccagtcccactgacgtagatctaatggacaaattcttctcaacaatggacaccacgcag
aagggaggctctgacagtgacatggaggatgtcgacctgaacatgagagccccatacatc
ccgatgaatgctgacgaggacttcagtcttgtgccgcccagtacagactcgctcttctca
ctgcagaacgacttcaacccaggactattcggtcgaaccgagtctgtgtttatggacaag
aatgctttcgaaatccctcgccgccccatgcaaccaagtgttcgagacatgattggagga
agtacagtggtcgcaagcatagaacagccacctgacaccatgttactacaagtcaaacgg
cctctggacatgaatagcctggaaaaagggcctcctgttgcgaaagcagtaaaacggaat
gatccgaggcccttgcttggagtcatgcccactccaagcaggcaattccaaaggctgttc
ctgccacctccccctatgaggtccatgataccgggcaaaagctgtcgcttcagcgtaaat
ccattttgtcttccagaaggtttgcccagcaaggaaagcgtattacttaatttattactc
actggtgaagatcgtaaccatggttacaaagtcaactcatctctccaacgaatgcatggg
ttgaaacataatttgttcacggatttgactcgccaagactgtgaagtaaacgctccgacg
caatctcatcatctccttcaaggcgaggatctgcgatccgccctcgatgcagactgtcgg
ctcaacaagcgtaacatgactgccgccatgtag
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