Haliotis rubra (blacklip abalone): 124285582
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Entry
124285582 CDS
T07967
Name
(RefSeq) THO complex subunit 3-like
KO
K12880
THO complex subunit 3
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03013
Nucleocytoplasmic transport
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124285582
09122 Translation
03013 Nucleocytoplasmic transport
124285582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124285582
03041 Spliceosome [BR:
hrj03041
]
124285582
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124285582
Spliceosome [BR:
hrj03041
]
Complex C
Other components
EJC/TREX
124285582
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124285582
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
TRM82_WD
PAC11
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_EIPR1
DSE1_N
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_Nup120_160
eIF2A
MIOS_WD40
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
CFAP251_N
DUF7785
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
124285582
NCBI-ProteinID:
XP_046577792
LinkDB
All DBs
Position
Unknown
AA seq
173 aa
AA seq
DB search
MASQMESMLKHFQNNNRIRDIQAHSAKVHSVAWSCDGRKLASGSFDKTVSTYSLDRDRLS
KDHIFRGHGDSVDQLCWHPRNPELLVTASGDKTVRIWDTRSSKSAATINTKGTVRKPTKE
STRGIQLARIKQLDVIGIHMMINCVPPYDISKISRIKSKQYQSKDRSLRNSTT
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcaaatggagagcatgctgaaacattttcaaaacaataacagaatacgcgat
atacaagctcattcagccaaagttcactcagtggcttggagctgtgacggccggaagtta
gcatctgggtcttttgacaaaacagtcagcacttactcactggatcgcgatagattgagt
aaggatcatattttccgtggccatggtgacagcgtggatcaactgtgttggcatccacgc
aatccagaactcctcgtcacagctagcggggacaagacagtccgcatctgggacactcgt
tccagcaagtcggcagctacaattaatacaaagggaacagttagaaaacctactaaagag
tccactagaggcatccagcttgctagaatcaaacagctggatgtcatcggcatacatatg
atgattaactgtgttcctccgtatgacatctccaagatttctcgtataaagagtaaacaa
taccagtccaaggaccgatccttgaggaactccacaacataa
DBGET
integrated database retrieval system