KEGG   Haliotis rubra (blacklip abalone): 124285845
Entry
124285845         CDS       T07967                                 
Name
(RefSeq) probable histone deacetylase 1-B
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj03082  ATP-dependent chromatin remodeling
hrj03083  Polycomb repressive complex
hrj04330  Notch signaling pathway
hrj04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    124285845
   03083 Polycomb repressive complex
    124285845
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    124285845
   04350 TGF-beta signaling pathway
    124285845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hrj03036]
    124285845
Enzymes [BR:hrj01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     124285845
Chromosome and associated proteins [BR:hrj03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     124285845
   HDAC complexes
    Sin3A-HDAC complex
     124285845
    BRAF-HDAC complex
     124285845
    REST complex
     124285845
    SHIP complex
     124285845
    MiDAC complex
     124285845
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     124285845
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    124285845
  Chromatin remodeling factors
   NuRD complex
    124285845
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 124285845
NCBI-ProteinID: XP_046578074
LinkDB
Position
Unknown
AA seq 515 aa
MASQTHKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKATA
EEMTKFHSDDYIKFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGMYEFCQLSTGGSVAGA
VKLNKQAADIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGD
GVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIF
KPVIMKVMEMYQPSAIVLQCGADSLSGDRLGCFNLTLKGHGKCVEYMKKWNLPVLLLGGG
GYTIRNVARCWTFETSIALAVDMANELPYNDYFEYYGPDFKLHISPSNMANQNTTEYLDK
IKTRLFENLRMLPHAPGVQMQAIPEDAIQDDSEDEEKENPDERISIRASDKRIACDEDLS
DSEDEDGIGRRDRMNYKPKPKRARNEDEKKDGDKDSKDDKKDVKKEPGEAKDESKQAAGD
DKSEGGEKKEAAKEAGAPESKESDQSSQEPTKMEH
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggcttctcaaactcacaagaagaaagtctgctattattatgacggtgacattggaaac
tactactatggacaaggtcaccccatgaagccccacagaatacgaatgacacacaatctt
atcctcaactatggactatacaggaagatggagatttataggccccacaaagccacagct
gaagaaatgaccaaattccacagtgatgattacatcaagtttttacgcagcattcgtcca
gacaacatgtcagaatacaacaaacagatgcagcggttcaatgttggtgaagattgtcca
gtgtttgatgggatgtacgagttctgtcagctttctactggaggctctgtagctggtgcc
gtcaaactgaacaaacaggcagctgatattgctgtcaactgggcaggaggtcttcaccat
gccaagaaatcagaggcctctggcttctgttatgtcaatgacattgtgttggctatcttg
gaacttctgaagtaccaccagcgtgtgttgtatgtggacattgacatccatcatggtgat
ggtgtagaggaagctttctacacaacagaccgtgtcatgactgtatcattccataagtat
ggtgaatacttccctggtacaggagatctcagggacattggggctggtaaggggaagtac
tacgctgtgaacttccccctcagagatggaatcgatgatgaatcatatgagagtattttt
aaaccggtgatcatgaaagtgatggagatgtaccagcccagtgctattgtacttcagtgt
ggagcagactctttgtctggtgatcgacttggatgcttcaacctcaccctcaaagggcat
ggaaagtgtgttgagtacatgaagaagtggaacctgccagtgctactgctcggaggagga
ggttacaccatcaggaatgttgcccgctgctggacatttgagacatccatagcccttgcc
gtggatatggctaatgagctgccatataatgactactttgaatattatggaccagacttc
aaactgcatatcagcccttccaatatggccaatcagaacacaacagaatacctggataaa
atcaagactcgtttgtttgaaaatctaaggatgcttcctcatgcaccaggtgttcagatg
caagctataccagaggatgctatccaagatgatagtgaagatgaggagaaggaaaaccct
gatgagaggatttcaattcgagccagtgacaagagaattgcatgtgatgaggatctgtca
gacagtgaggacgaagatggaattggacgcagagacagaatgaactacaaaccaaaaccc
aagcgagctcgtaatgaagatgagaagaaagatggagataaagactcaaaagatgacaag
aaggatgtcaagaaagagcctggtgaggccaaggatgagagcaagcaggctgcaggtgat
gataagagtgaaggaggtgaaaagaaagaggctgccaaagaagctggtgctcccgaaagt
aaggagtcagaccagagcagccaggaacccaccaagatggaacattga

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