Haliotis rubra (blacklip abalone): 124286143
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Entry
124286143 CDS
T07967
Name
(RefSeq) protocadherin beta-17-like
KO
K16498
protocadherin delta 1
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124286143
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrj01009
]
124286143
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrj04515
]
124286143
Protein phosphatases and associated proteins [BR:
hrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124286143
Cell adhesion molecules [BR:
hrj04515
]
Cadherins
Protocadherins
124286143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_4
LST1
DUF6377
Motif
Other DBs
NCBI-GeneID:
124286143
NCBI-ProteinID:
XP_046578796
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MSNTIIRGVLLLTSFQLTLCITLTYTIDEQQPAGSFLGNIADDANLRDYVSEEEFHRLRY
SFLTQGNPHTSNFSIDSTSGDFTTARELDRETLCNFLNTCKLSFEAVAQSNLGSFFKKIQ
LEINVKDINDNAPEFTMSTYVLQISEGANSGSNFPLVSAVDRDTGINNSVKSYDLQPKDT
PFILITTAGVTGIMSISLELVQKLDRETTGFYELFVFARDGGSPQRTGTLTLHINVADVN
DNPPVFDNVKYTLNISETTAAGSVIIRLLASDKDLGNNANISYHFMPRQPESVLNLFKLD
HVTGELRTAGSLEYEAGKMHQVIVEAHDHGVPSKTAQAVVIITIIDTHNDAPEMYINVFH
DSGIAEISEFSEIGRVVAHIAVEDPDSGSNGNVQCSMPNSSFELRGLDKNEFKVILVNAL
DRETVPFHNVSVICHDGGSPALSVQENFLVRVIDENDNAPEFPEDVYYANIVENKKIGTS
IMTFTATDADNGTNAELIYKVQDDHGHRFNIFRNGTLVTAMEFDREEYPEVVAKILAVDQ
GNPAMTATTTVIITIDDVNDQAPVFDMNKFQLSVPEESKSYTSVGQITASDSDLDENAII
MYQLHSSTRSNFPFIVYADGVIKTNRILDRETRDHYEFVVVATDLGQPPLSSTARVVVTL
DDINDHTPVIIFPTQANNTVTMPHTQRIESPVIEITAVDMDVERNAEVSYFIEGGNGSAV
FIIDHKTGIVRLRKQLESKHITTVYSLMVVAQDHGSPQRSTQSELFIEVILGNATLTTSN
QGSINIITAMVLVGVTILLAVIVVATICLLRSSDKKKRLYRAKAEEEKVISSMRRQGSSI
SSSSKNSTTPLAEKDGEKKEKEVSFSLDEENNVSLSSGSVGFNARNNECLFTIPEDTEND
NKKHHLSKQQKFSTFKDDSEKNHTHIRFHDDSGSDLSGDVSISDSGRGGSDIELQSHGGS
SNVLESDMSFSGHPRHPKNLVDHQSASPAASFSTFYGSDAQGTSYDNSSLSGSVQSKQIP
DNHLHNGAVPYRARTNNSAPATQRLSIPPRMKNNSHTNHGVPPRGNYSASYGQLSQNGGR
HKGPQDSGAYVHLKHPMIEGEYMDMNGHKMSRMHHVDDSVSEMNTSAWDNDTTTSGSYTV
DPEELCDEIDRLFFKQNINKDIIV
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacactatcatccgaggagttcttctgttgaccagctttcaacttacactctgc
attaccctcacttacaccatagatgaacaacaaccagctggaagtttcctggggaacatc
gccgacgacgcaaacctccgagactacgttagtgaggaggagtttcatcgactccgatac
agcttcttgacccaaggcaatccacacacctcgaacttctccatcgacagcacatctgga
gactttacaacagctcgagaacttgatagagagactttatgcaatttcctcaacacttgt
aaactctccttcgaagctgttgctcaatcaaatcttggctccttcttcaagaagatccag
ctggaaattaacgtgaaggacattaatgacaatgcacctgagtttacaatgtcaacttat
gttctgcagatttctgaaggagccaattctggttccaacttcccattggtcagcgcagtg
gacagagatacaggtattaataactctgtgaagagctatgatcttcaaccaaaggacaca
ccttttattctcatcactactgctggagtaacaggaatcatgtctatttcattggagctt
gtacagaaacttgacagggaaacaacaggtttttacgaactctttgtgtttgctcgtgat
ggtggatctcctcagagaactggaacccttacccttcacatcaacgtcgcagatgtaaat
gacaacccacctgtgtttgacaatgtaaaatacaccttgaacatttctgagacaactgca
gctggcagtgtcatcattcgtctgttagcctctgacaaagatcttggaaacaatgccaac
atcagttaccacttcatgcctcgacaacctgagagtgtcctcaacctcttcaagcttgat
cacgtcactggagaacttcgaacagcaggatccttggaatatgaagcaggaaagatgcac
caggttattgtggaagctcatgaccatggagttccatccaagactgcccaagctgtagta
atcatcactattattgacactcacaatgatgctccagagatgtacatcaatgtgtttcat
gacagtggcattgcagagatatctgaattttctgaaattggtcgtgttgttgcacatatt
gctgtggaagatccagactcaggttctaatggaaatgttcagtgctctatgccaaactcc
tcctttgagctccgtggccttgacaagaatgagttcaaagtcatccttgtgaatgctctt
gatcgtgaaactgtgccctttcacaatgtgtctgttatctgccatgatggaggctcccct
gccctctccgtccaggaaaacttcctagtaagagtaattgatgaaaatgacaatgcacct
gaatttccagaagatgtttactatgcaaatattgttgagaacaagaaaattggaacttct
atcatgacattcactgctacagatgccgataatggtacaaatgctgaactcatttacaaa
gttcaggatgatcatggccacaggttcaacatcttcaggaatggaactctggtgacagcg
atggagtttgaccgagaagaataccctgaagtggtagccaagattctagctgttgaccaa
ggcaaccctgccatgactgctaccaccacagtgatcatcaccattgatgatgtcaatgat
caagccccagtctttgacatgaataaattccaactctctgtgcctgaagaatcaaaaagt
tacaccagcgttgggcagatcactgcatcagactctgatttggatgaaaatgcaatcatc
atgtaccagctccatagttctacaagaagcaactttcccttcatcgtctatgctgatggt
gtaatcaagacaaaccgtatcctggacagggagacgagagatcattatgaatttgttgtg
gttgcaactgaccttgggcaaccaccactgagcagtacagccagagtagtggtgaccttg
gatgacatcaatgaccacaccccagtcatcatcttcccaacccaggctaacaacaccgtg
acgatgccacacacccagcgaattgagtcccctgtcattgaaattactgctgttgatatg
gatgtggaacgtaatgctgaagtttcctacttcattgaaggtggcaatgggagtgctgtg
tttatcattgaccacaaaacgggcattgttcgcctgaggaaacaacttgagtccaaacat
atcaccactgtgtacagcctgatggtggttgctcaggaccatggctctccccagaggtcc
actcagtcggagctcttcatcgaggttattttaggaaatgcaactttaaccacctccaac
caaggctccatcaacatcatcactgccatggttctggttggtgtcaccatccttcttgca
gtcatcgtcgtggcaaccatttgccttctccgaagctcagataagaagaagaggctgtat
cgtgctaaggcagaggaagaaaaggtcatctcaagcatgaggagacagggaagtagtatc
tcctcctcatcaaaaaactccacaactcctctagctgagaaggatggagagaagaaggag
aaggaggtcagcttctcactggatgaagaaaacaatgtttccctgtcatctggatctgtt
gggttcaacgctcgcaacaacgaatgcctcttcactatcccagaagacacagagaatgat
aacaagaaacatcacttgtcaaaacagcagaagttttccactttcaaggatgacagtgag
aagaaccatacacatatccgtttccatgacgacagtggcagcgatctgtctggtgatgtc
agtatcagtgacagtgggagaggaggcagcgacattgaattacagagtcacggaggatcc
tcgaatgttttggaatcagatatgtctttttctggccatcctcgtcatccaaagaatctt
gttgaccaccaatcagcttcaccagcagcaagtttctccacattctatggaagtgatgca
caaggcacaagctacgacaattcctcactgtccggttctgttcagtccaaacagattcct
gataatcatcttcacaatggtgctgtcccctaccgggcaaggacaaataactctgcacct
gctacccaaagactctcgatacctccgagaatgaaaaacaattcccatacaaatcatggt
gtacctccccgaggtaattatagtgcttcttatggacagctatctcagaatggaggaaga
cacaaaggaccacaggattctggggcatatgtgcatttaaaacatcccatgattgaagga
gagtatatggacatgaatggacataagatgtcacgcatgcatcatgttgatgactctgtg
agtgaaatgaacacttccgcatgggataatgacacgacaacctccggcagctatactgtc
gatccagaagaactttgtgatgaaattgatcgattgtttttcaaacaaaacatcaacaag
gatattattgtgtga
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integrated database retrieval system
