Haliotis rubra (blacklip abalone): 124286576
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Entry
124286576 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrj03036
]
124286576
Enzymes [BR:
hrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124286576
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Meiosis-specific proteins
Others
124286576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
Helicase_C
DEAD
ResIII
HHH_5
AAA
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
124286576
NCBI-ProteinID:
XP_046578900
LinkDB
All DBs
Position
Unknown
AA seq
1688 aa
AA seq
DB search
MMDSIFLSSNISQSDGLSTQKRKWSGIPEPPTDIDDEILSSSFFSELPTSEVFYISQSQK
KPISPLIFKSQGKENAFLQMKCQSQTSFKNQLPRHPTFKPPQKQAFNPVYQRESEDDNLM
DYDIQQKPSLSIIPGQGLSGVDKRSQSLVIHRRWEFMDNKTYVKSYVNPSFNPEVDPEDD
EMLGGLTPPKRRCFQFSQAHNSDFQPEKSKISSFSHPSETGNRKMVSDISRTCPQKDKGS
KFSTPYISSRRKFDASDSGFCEPSPVDSLNTPACLIVPNADNGQTRLRSVEEIPASFREV
FDFPYFNMVQSMVLDDVLYTDKPLVVSAPTGAGKTVIFELAITRLLNKFGEIKQNWKIVY
GNLNSLFPEKWDSMSRKWKDNRSLFQTISLFLIDEIHILNDSTRGSTVEAVVSRMKTLRL
TDRATDRPVMRFVGVSATIPNIEDIATWLGNAENPATSFKLGEKYRPVRLQKIVVGYPFK
PGSSDFRFDMNLAYRLKSIIETYSNNKPSLVFCSSRKSVEQSADILRKELHGRSLVKPQF
REAVSKTCQLIRETKIADMVRVGIGVHHAGLSTAERRHVEELFRNAMLPVLVSTSTLAMG
VNLPAHLVVIKSTVFYSMGSPTEYSNSQVLQMIGRAGRPQFDTSATAVIMTKSDTKSKYE
NLMNGTQRIESSLHKHLIEHLNAEVVLHTITDMALAVEWIRHTFLYVRIMQNPTHYGYPT
GLDRKQVEKRLEDLCLQNLNKLADFKLVTMDEETFAILPTETGKLMARYCIAFETMKMFD
SVNGEETIKDMLDLMVSCSDFDEFVQLRNNEKATLNALNKNKNKPTIRYPLTGRIKTKQM
KTNCLMQAQFGCLPIQDFSLSQDVLKIFRVGQRVAKCLMEFLWQRKDYRALLTAIELFKS
TKTKLWVDTKYVAKQLDGIGPTMSLSLVNAGLTTFQKLEQTNPREIELIVNRHPPFGNQV
RDALAVLPKYEMSIEQINHYKTNTCVLVVSINLVNRETIQSKKGSTNHQSVLLIGDQDNH
IVFKWRIIDSQILRDDVWKRRIDVTRSSAGPELYVHLISVQYVGLDIHTTYIPVYQWCSE
HMQMTSHPGDSAAIKRPPADQGQQTQLGASAPPGRCNHKCHNKAQCGHKCCKXGISNPGQ
SGTINKPVSHNISPVRNQKGVDAQIRMLKSKASSLDLMSGASKRKKMCDMKRGLGLQQYA
YQKPPSMRTYDQHSKPQQAPAHSIQEPMQRHQPFNSRTILGNILGNIKYGVGGRRIDPGL
RRDSNMEKHSLYQDLYADEWQDDSDVNTFQYGLTGFDNEDGSISMQYSCPNRGSTDPWKE
NQSPAKLRGPPPNQLLGDMQRGCGTAGTLGSLCNLDDAGELDDNWDSVSIQQGPSALQSR
NQSPAHISCHDDWAELHMYQKDREALEQEIYDVDPDGFSPECFTSADLQELDRHSNLQPE
DTRQTESCKTTTNIYPSRNSYLQLQTYSRPVLQQNQYRNGGSVARDGHHLSHAGVEVVKD
NTGAFTTSQSSDDELCYVGEILGRQDYEYDTLPPSNHTPKPQYGKLRTGNTPVPPGPDNA
PCGDKLLVGQKTPPYSSHRRSSTSRKHSFGQVVAWVADSDSSPCSQKSIPRSRTPLLKRS
TLMVELQKRTPTNGSGTSDNEEKSVQLSVKKGDLVYPETNTSSFFHLFRPNVTDDMGDMN
ENIFAGIF
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagcatcttcctttcatctaacatctcacaatcggatgggttgtctactcag
aaaaggaaatggtctgggataccggaacctccaacagacattgatgatgaaatcttgtcc
agctctttcttctcagaattacctacatcagaagtgttctacatctctcagtcccagaag
aaaccaatatcacctcttattttcaaatctcaaggaaaagaaaatgcttttctacagatg
aaatgtcagtctcaaacaagtttcaaaaatcaacttccaaggcatcccacctttaagcct
ccccagaagcaagcctttaaccctgtataccaaagagaatctgaggatgataacctcatg
gactatgacatccaacagaaaccatcactcagcatcatacctggtcaaggactctcaggt
gtagacaagcgatctcagtcattagtgatacacaggaggtgggaatttatggacaataaa
acttatgtcaagtcttatgtcaacccatcatttaacccagaagttgatccagaagatgat
gaaatgctgggtgggttgactccaccaaaaagaagatgtttccagttttcacaagcacat
aattcagattttcagccagaaaagtcaaagatttcatctttcagtcatccatcagaaaca
ggaaatagaaagatggtctcagacatttcacgaacatgtccacaaaaggacaaagggtcc
aagttttccacaccatacatctcatcaaggagaaagtttgatgcttcagatagtgggttc
tgtgagcctagtccagttgattcgctcaacactcctgcctgtcttattgttccaaatgca
gacaatgggcaaacaagactgcgttcagttgaagaaattcctgccagttttagggaggtg
tttgattttccatacttcaacatggtgcagtcaatggttctagacgatgtgctctacacg
gacaagccactggtggtgtctgcaccgacaggagctgggaagacagtgatatttgaactt
gccatcaccagattgctcaataagtttggggaaatcaagcaaaattggaaaattgtttat
ggtaacttgaacagtttgtttcctgaaaaatgggacagtatgtctaggaagtggaaagat
aacaggtcattgttccagacaatatccctgtttcttatcgatgagatccacatcttgaat
gacagcacaagggggtcaacagtagaggctgtggtcagtaggatgaagaccctaaggctc
actgacagagccactgaccggcctgtcatgagatttgttggagtctcggctaccatcccc
aacattgaagatattgctacatggcttgggaatgcagaaaacccagcaacaagcttcaaa
ttaggggaaaagtaccggcctgtgaggctacagaagattgtggttggctaccctttcaag
ccaggctcttctgacttcagatttgatatgaatctagcctaccgactgaagagtatcata
gagacatattccaacaacaagccctccctcgtgttctgctcctcccgcaagagtgttgaa
cagagtgctgacatcctgaggaaggagcttcatggacggtctcttgtgaagccacagttc
cgggaggcggtcagcaagacatgccagctcatcagagaaactaaaattgcagatatggtg
cgtgtcggcattggggtacatcatgccggcctgagtactgctgaaaggagacatgtggaa
gagctgttcaggaatgccatgctgcctgttcttgtatcaaccagcacattggcgatgggt
gtaaacctgccagcccacctggtggtgatcaagtctacagtgttctacagcatggggtcc
cccaccgagtactcaaactcgcaggttctgcagatgataggccgagcggggagaccacag
ttcgacacctcggctacagctgtcatcatgacaaagtctgatacaaagtcaaagtatgaa
aacctgatgaatggcacacaaaggattgaaagcagccttcacaagcacctgatcgagcac
ctgaacgctgaagtcgtcctgcacactatcactgacatggccctggctgtggagtggatc
agacacacctttctgtatgtccgcatcatgcagaacccaacacactatggatatcccact
ggtttggacagaaaacaagttgaaaaacgacttgaagatctttgtctgcaaaacctgaat
aaactggctgacttcaaacttgtaaccatggacgaggaaacttttgccattctaccaaca
gagacagggaagctgatggcaagatactgtattgcctttgaaacaatgaagatgtttgat
tctgtcaatggagaggaaaccatcaaggatatgctagatctgatggtcagctgctctgac
tttgacgagtttgtacagctgcgaaacaatgagaaggcaacactgaatgcattgaacaag
aacaagaacaagcccaccatcagatatcctttgactggaaggatcaaaacaaaacagatg
aaaacaaactgcttaatgcaagcccagtttggatgtcttcccatacaggacttctccttg
tcacaggatgtcctcaagatatttagagttgggcaacgtgtggcaaaatgcctgatggag
ttcttgtggcagaggaaggactacagagctctgctgacagccattgagctgttcaagagt
accaagaccaagctgtgggttgacaccaagtatgttgccaagcaactggatggcattggt
ccaaccatgtccctgtcactggtgaatgctggcctgacgacctttcagaagctggagcag
acaaaccccagggaaatagaactgattgtgaacagacaccctccatttggcaatcaggtc
agagatgctcttgctgttctacccaagtatgagatgtcaattgaacagataaaccactac
aagaccaacacatgcgtgcttgtagtcagcatcaacctggtcaaccgggagaccatccag
tccaagaagggatccacaaatcaccagtctgtgcttctcattggggatcaggacaaccac
attgtcttcaagtggagaatcattgacagccagattcttagagatgatgtctggaagcgg
aggattgatgtgactcggagcagtgctggcccagaactctatgtgcatctcattagtgtg
caatacgttggtttggatatccatacgacatacataccagtctaccagtggtgtagtgag
cacatgcagatgacaagtcatcccggtgacagtgcagctatcaaacgtcccccagcagac
caaggacaacagacacagcttggggcatctgctccgccagggcggtgtaatcacaagtgt
cacaataaggcccagtgtggccacaagtgctgtaagngaggaatttcaaaccctggccaa
tcaggcactatcaacaaaccagtgtctcacaacatcagcccggtgcgtaatcagaagggt
gtcgatgctcagatcagaatgctgaagagtaaagcaagctcacttgatctaatgtcagga
gcatccaagaggaaaaagatgtgtgatatgaaacgtggtctgggtttgcagcagtatgcc
taccagaagcctccttccatgagaacatatgaccaacatagcaaaccacagcaagcacct
gctcactccatacaggaaccaatgcagagacaccagccattcaactccagaaccattctt
ggaaacattcttggaaacatcaaatatggtgtaggtgggaggaggatagatccagggctc
agacgagatagcaacatggagaagcattccttgtatcaggatctatatgcagatgaatgg
caggatgactctgatgtcaacacattccaatatggtttgactgggtttgataatgaagat
ggcagcatatccatgcaatattcatgtccaaacagaggttcgacggatccatggaaggaa
aatcagtccccagctaaactgagaggaccaccaccaaatcagttgttaggagacatgcag
agaggatgtggtactgctgggacgttgggatcattatgcaatcttgatgatgctggagag
cttgacgacaactgggacagtgtgagcatacagcaggggccctctgcactgcagtcccgg
aaccagtcaccagcacacatctcttgtcatgatgactgggctgagctccatatgtatcag
aaggatagagaagcgcttgaacaagagatatatgatgtagatcctgatggtttttcccct
gagtgttttaccagtgctgatctccaggagctggacagacacagcaaccttcagcctgaa
gacaccaggcagacagaatcttgtaaaacaacaacaaacatttacccatcaaggaacagc
tacttacaacttcaaacatacagcaggccagttcttcagcagaaccagtataggaatggt
ggcagcgtggcaagggatggacaccatctgtcacatgctggtgtagaggttgtcaaggac
aacactggagcatttacaacaagtcagtcaagtgatgatgaactatgctatgtaggagaa
atacttgggagacaggactatgaatatgatacactgccaccttcaaaccacacaccaaaa
ccacaatatggaaaattgaggacaggtaacaccccagtcccaccaggtcccgacaatgct
ccatgtggtgacaagctacttgtaggacagaaaactcctccatacagttcccatcgacgg
tcttctacatccagaaaacacagtttcgggcaggttgtggcctgggttgctgactcagac
tcctctccctgtagccagaagtccattccaaggtcaaggacaccactgctcaaaaggagc
actctaatggttgagcttcaaaaaaggacacccacaaatggctcagggaccagtgataat
gaagagaaatctgtgcagctgtctgtgaagaaaggtgacctggtgtacccagaaacaaac
acatccagcttcttccatctgttcaggcccaacgtgacagatgacatgggtgacatgaat
gaaaacattttcgctggcattttctga
DBGET
integrated database retrieval system
