Haliotis rubra (blacklip abalone): 124288787
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Entry
124288787 CDS
T07967
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124288787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124288787
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124288787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_12
TPR_4
SPO22
ANAPC8
BLOC1S3
Motif
Other DBs
NCBI-GeneID:
124288787
NCBI-ProteinID:
XP_046581269
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MADSRSEDTPEVVESLPSLPTVTEHQRELGCQALREFENQQFGQCVSTLHKLLKERSSDV
KVSQNKAVAEFYHSGLKNVEEFRKKLNCFSINPDAFDSLEDMDHAFVYYNQAVLLYHLRQ
YRASLSLLDKLFQCIEPLEELLARKVLLLLVELYLCTFQPEKAMGMLSYMEKTYFNGKHG
AGQGTPEKPEKGKDHKDSSENSVEAWRPRISVYKIRCLIMLKSMKMCKRELKSLLNTQTM
STSVIYLKSNFEYLRGNLRKAIRMLGSDPQAQVFTNTGESLPMMYFNNLGCIHFHLRKHH
LGAFYLRRAVQENENALKDAAAGGQNRPLHTRGMSRHYELLYNMGIQLLHCGRPQAAFDC
LIEAVQVYQVNPRLWLRLAECCIQANRENNDEDRSLEKRLEVIQGSVGSGVHRKLILGCG
VGKFKPSSTTPSMPSATLEFASLCLRNAMLLLPEDPLLADKATPSSDDHEGRPTPEPVLM
SAPPGNPMKATEIAHLRCSILAASAYTCLCLNDHLMALHHAENLLKQPHLSGAQRYIGHL
YVAEAQVQLDKIPDSIGHLNPDLVTDIGTCPPEHKSEQEKTDKNDKGEKDLLADSTEAKS
SLYPWFPKDLSRAKAVMQYNLAAAHAMRGEYDKAMTHLTESSRNIGAPPSADVLPETVPG
PDGGAEEDGPACHQGTLRSRHPQQNLDHPYSRSCHSTI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcccgatctgaagacaccccggaagtagttgagagtttgccatctcttcca
acagtaacggaacaccagagagagttggggtgtcaagcactgagagagtttgaaaaccaa
cagtttggacaatgcgtttcaacccttcataaactactgaaggagcgatcatccgatgtc
aaagtgtcccaaaacaaagcagtggctgaattctatcacagtggtttaaaaaatgtggag
gagttcagaaagaaactgaattgtttctccatcaaccctgatgcattcgacagcttggaa
gatatggaccatgcgttcgtgtactacaaccaggccgtgcttctgtaccatctcagacag
taccgggcgtctctcagtctcctggataagttatttcagtgcattgaaccgctggaagaa
ctcctagccagaaaggtgcttctgctgctcgtggagctgtacttgtgcacgtttcagccg
gagaaggcaatgggcatgctgagctacatggaaaagacctactttaatggtaaacatggc
gccgggcagggcacgccggagaagccagagaagggaaaggaccacaaggacagctccgag
aattccgtggaggcgtggagacctcggatcagtgtttacaagattcgctgtctgatcatg
ctcaagtccatgaagatgtgcaagagggaactcaagtctttactcaacacacaaacaatg
agcacctctgtgatatacttgaagagtaactttgagtatctgcgagggaatctgcggaag
gctatccggatgctgggctcggacccccaggctcaggtctttactaacacgggggagagc
ctcccgatgatgtacttcaacaacctgggatgtattcacttccacctccgcaaacatcac
ctcggggccttctacttgcgcagagctgtacaggagaatgagaacgctctgaaagatgct
gcagcaggaggccaaaatcgcccgctacatacacgtggcatgagtcgacactatgaactg
ctgtacaacatgggtattcaactgctccactgcggacggccacaggcggccttcgattgt
ctcatagaggcagtacaggtgtaccaggtgaaccctcgactgtggctgaggttagcggag
tgttgcatacaggcgaacagagagaacaatgacgaggaccgtagtttagagaagcgactg
gaggttatccaaggctcagttgggagtggagtacacagaaaactaatccttggatgtggc
gtcggcaagttcaaacccagttcaaccacaccctccatgccgtcagccactctggagttc
gcctcactgtgtctgcggaacgctatgcttctgctgccagaagacccactgttggcagac
aaggccacgccgtcctccgacgaccatgaaggaagacccaccccagaaccagtcttgatg
tcagcccctcctggcaacccgatgaaagctacagaaatcgctcaccttcgctgctccatc
cttgcagcatccgcgtacacctgtctatgtctcaacgatcacctcatggcccttcatcat
gcagagaacctcctaaaacagccacatctctcgggcgctcagaggtacattggtcacctc
tatgtagccgaggctcaggtacagctggacaaaatacccgactctatcggacatctgaat
cctgacctggtcacagacatagggacatgtccgccggaacacaagtctgaacaggagaaa
actgataaaaatgacaaaggagagaaggacctactagcagacagcacagaagccaaaagc
tcactgtatccctggtttccaaaggatttgtctcgtgccaaagcagtgatgcagtacaac
ttagcagccgctcatgcgatgagaggggagtatgacaaggccatgacacatctcactgag
agttcacggaacattggcgcccctcccagcgcagatgtacttcctgaaactgtacctgga
cctgatggaggggcggaggaagatggcccagcatgtcatcaaggaacacttcggtcacgt
cacccccaacagaatctagaccatccatatagtcgcagttgtcacagcacaatctag
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