Haliotis rubra (blacklip abalone): 124288865
Help
Entry
124288865 CDS
T07967
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124288865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrj03041
]
124288865
Spliceosome [BR:
hrj03041
]
Complex C
Other components
Step II factors
124288865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_SCAP
NBCH_WD40
Beta-prop_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
124288865
NCBI-ProteinID:
XP_046581389
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MAAILGLQEYGSDTNSSDGESKNDREVFNMHLKPLINKEKSDLIVSLNAAPAVAPKYDGN
SRLLDIDVKEVKHNLKYEDMYAPQVGPTHPFKTRQFQSNRNMLSGYTEPAHVSDFQFENQ
RRTFTSYGYALDPSNDQAEVDKVVGDNTAAEDNKGITVFEVKPSAGAKRKKEKNRDPADI
DGYLGPWAKYADEQTVMKPSEEEQKELDEILAKRSKHSKQVEEKPMEEKTTLHIKDAYDY
QGRSFLHAPQDVGVNLRSEEPPEKCFLPKKLIHTWSGHSKGVAAIRWYPHTAHLMLSAGM
DTKIKIWEVYNERVCVRTYAGHKQAVRDITFNNEGNEFLSCGYDRYCKLWDTETGQCKSH
FTSRKVPYCIKFNPDKDKQHLFVAGTSDKKIVCWDIRSGEVVQEYDRHLGAVNSITFVDQ
NRRFVTTSDDKSLRVWEWDIPVDFKYIADPSMHSMPSVTLSPNGKWLACQSMDNKICVFN
VLNRFKFMRKKTFTGHMVAGYACSIDFSPEMSYIISGDADGKLYIWDWKSTKLYNKWKAH
DDVCIGVLWHPHETSKVATCGWDGVIKYWD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaatattaggcttgcaggagtatggcagtgatacaaattcgtctgatggtgaa
agtaaaaacgaccgagaagtttttaacatgcatttgaaacccttaattaataaagaaaag
tctgatctcatcgtgtccctaaatgctgctccagctgttgcacctaagtatgacggaaac
agcaggctactggatattgatgtaaaggaagtcaagcacaacctcaaatatgaagacatg
tatgcaccccaggttggccctactcacccatttaagacacgacagtttcaatccaatcgg
aacatgctgtcaggttacacagaacctgctcatgtcagcgactttcagtttgaaaatcag
cgcagaacattcacaagttacggttatgcccttgaccccagtaacgaccaggccgaagtt
gacaaggttgtcggggacaacacagctgcagaggataacaaaggtattacagtgtttgaa
gtaaaaccaagtgctggtgcaaaacgaaagaaagaaaagaatagagacccggcagatatt
gatggctaccttggaccctgggcaaagtatgctgatgagcaaactgttatgaagcccagt
gaggaggagcagaaggagctggatgagatcctggccaagagaagcaagcacagcaagcag
gtcgaggaaaaacccatggaggagaagacaactctacacattaaagatgcatatgactac
caaggccggtcattcctccatgcaccacaagatgttggggtcaacttgcggtcagaggag
ccaccagagaaatgtttcttgccaaagaagttgattcacacctggtcaggccacagtaag
ggtgtggcagccatcaggtggtacccccatactgctcacctcatgttgtctgctggtatg
gacacaaaaatcaaaatttgggaggtatacaatgagcgggtgtgtgtacgaacatacgca
ggccataagcaggccgtgagagacatcaccttcaacaacgaaggcaatgagttccttagc
tgtggctatgacagatactgcaagttgtgggacacagagacaggtcagtgcaagtcccac
ttcaccagccggaaggtgccttactgcatcaagtttaacccagacaaggacaagcaacat
ctgtttgtggctggaacttcagataaaaagattgtgtgttgggacatcagatcgggcgag
gtggtgcaggagtacgatcgccatcttggagctgtgaacagcatcacatttgttgaccag
aaccgtagatttgtaacaacttctgatgacaaaagtttaagagtttgggagtgggacatt
ccagtagatttcaagtacattgcagacccatccatgcactcgatgccatctgtaactctc
tctcctaacgggaagtggttggcttgtcagtctatggataacaagatttgtgtgttcaat
gtcctcaaccgctttaaattcatgaggaagaagacatttactggtcacatggtggctggg
tatgcttgttccattgacttctctcccgaaatgagctatataatctctggagacgcggat
ggcaagctttacatctgggactggaagagcacaaagctgtacaacaagtggaaggctcat
gacgatgtgtgtatcggagtgttgtggcatccccatgagacgtccaaggtggccacctgt
ggctgggatggggtcatcaagtactgggactga
DBGET
integrated database retrieval system
