Haliotis rubra (blacklip abalone): 124289322
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Entry
124289322 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124289322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrj03041
]
124289322
Enzymes [BR:
hrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124289322
Spliceosome [BR:
hrj03041
]
Complex A
U2 snRNP components
U2 related factors
124289322
Complex B
124289322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
DUF3928
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
124289322
NCBI-ProteinID:
XP_046581890
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MPRDSRSYRRRSRSRSLSRERSRRKRSRSRTPLRSRERDRLRRSRSRDRDRKRSRSRSRD
RDTKRDRRKRSRSKEKDRKREKKSKSRSPEKKAKSPSPSAEKVLHREGELRVKDEPLNKE
EEQKRLEVEMQKRRERIEKWRAERKKKQELLPINITPPMKKWTLEDDDEDEDEVVQEKDK
DDENEVDPLDAFMQSVTDEVKSARDKDKTHDKVDNQKGTNGNGAQAAAATGKVTFITAVA
KKKEDTSKEKGEVMESNIDAMEYSSEEEEEDLDTTMSNMARKRKELTVVDHERIYYAPYR
KNFYVEVPEIAKLTQEEVDQLREDMEGIKVRGKNCPKPVKSWAQCGVSKKIMDVLKKHQY
EKPTPIQAQAIPAVMSGRDLIGIAKTGSGKTLAFLLPMFRHVLDQAELEDEDGPIAVVMT
PTRELALQIXIECKKFVRTMGLRCVCVYGGTGISEQIAELKRGCEIIVCTPGRMIDMLAA
NNGRVTNLRRCTYVVLDEADRMFDMGFEPQVMRIMDNIRPDRQTVMFSATFPRQMEALAR
RILNKPTEVQVGGRSVVCKDVEQHVIILEDDKKFLKLLELLGIYQEHGSVLVFVDKQENA
DELMKELMRHSYPCLSLHGGIDQYDRDSTILDFKNGNIKLLVATSVAARGLDVKQLILVI
NYDVPNHYEDYVHRCGRTGRAGNKGFAYTFFTPEQERYAVDIIKALELSNAPVPQDLVQM
WNDYKERAKAEGRTIKSSSGFRGKGFKFDETEAQLADERKKLQKAALGLQDSDDEDAGMD
IDQKIEDMFASRKRVTDVAKPIANQQTQQQQSNQQKLELAKRLAARINMQLNLGPDAQDI
TQQAAAAILKGDSVAAPQVASKTIAEQMAEKIHAKIGYRPQAEEEKEQESAGETFKRYEE
ELDINDFPQTARWKVTSKEALAQICEYSEAGITVRGTYVPNDKDLKEGERKLYLAIEATS
ELAISKAKKEITRLIREELVRLQNCYIPNANKNRYKVL
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgcctagagacagcagatcctacaggcggagatcccgatcaaggagcttatcccgtgag
cgcagcagaagaaagagaagcaggtctcgcacccctttaaggtcaagggaaagagatcga
ttaagacgctcacggtcccgagatagggatcgaaagagatctaggagcaggtcgagggac
cgtgacacaaagagagataggagaaaacgatcccggtcaaaagaaaaggataggaaacga
gagaagaagtccaaatccagatcccctgaaaagaaagcaaagagcccatcccccagtgct
gaaaaggttctccacagagaaggagaactgagggttaaagatgaaccactcaataaggaa
gaggaacagaaacgccttgaggtggagatgcagaaacgacgtgaacgtatagagaaatgg
cgagcagagcggaagaagaaacaggaactgttgcccataaacatcactcccccgatgaag
aagtggaccctggaggatgacgatgaagatgaagatgaagtggtgcaggagaaagataag
gatgatgagaatgaagttgacccacttgatgccttcatgcagtctgtgacagatgaggtg
aaatctgctcgtgataaagacaagacccatgacaaagttgacaaccagaaaggaacaaat
ggtaacggtgcccaagcagcagctgcgactggcaaggtgacgttcatcacagctgtggcc
aagaagaaggaagacaccagcaaggaaaaaggagaagtgatggagagcaacatagacgcc
atggagtattcgtcagaagaggaagaggaagatctggacacaacaatgtccaacatggcc
aggaaaagaaaggagctaacagtagtggatcatgagcgcatttactatgccccttacagg
aagaacttctacgtggaagtacccgagatagccaagctgacccaagaggaggttgatcag
ctgcgagaagacatggaagggataaaggtgcggggcaagaactgccctaaacctgtcaaa
agctgggctcagtgtggagtcagcaagaagatcatggacgtcctcaagaaacatcagtac
gagaagcccacacctattcaagcccaggcaatcccagctgtaatgtcaggtcgggatctc
ataggaattgccaagaccggcagtggtaaaaccctcgccttcctcctccctatgttcaga
catgtgctggatcaagcagaactggaagacgaagatggacctatagccgtggtaatgacc
ccaacccgtgagctggcgctacagatcntcatcgaatgtaagaaattcgtcagaactatg
ggactgagatgtgtgtgcgtgtacggcgggacaggaatatccgagcagatcgcagagttg
aaaagaggctgcgagatcatcgtttgcacaccagggagaatgattgacatgctggctgca
aataatggacgtgttaccaacctgcgtcgttgtacgtatgtggttctcgacgaggcagac
aggatgtttgacatgggatttgagcctcaggtgatgagaataatggacaacattcgacca
gatcgtcagactgtaatgttttcggccaccttcccacgacagatggaggccttggcaaga
agaattctaaacaaaccgacagaagttcaggtcggaggtcgcagtgtggtgtgcaaagac
gttgaacaacatgtaattatcctggaggatgacaagaagttcttgaaactgctggagctg
ctgggcatctatcaggaacacggcagtgtcctggtgtttgtggacaagcaggaaaatgca
gatgagctgatgaaggagttgatgcggcactcctacccatgtctgtctctacacggcggc
atcgaccagtatgatagggacagcactatcctggacttcaagaacgggaacatcaagctt
ctggttgcaacgtctgtggcagcgagaggcctggatgtcaagcagctcattctggtcatc
aactacgacgttccaaaccactacgaggattatgtgcacagatgcggccggacaggtaga
gcaggcaacaaaggttttgcctacacattctttactcctgagcaggagaggtatgcagtg
gacataatcaaggcccttgagctgtctaacgctccagtacctcaagacctggtacagatg
tggaatgactacaaggagagagctaaggctgaggggcgaacaatcaagagctccagtggg
ttccgtgggaaagggttcaagtttgatgagacagaggcccagctggctgacgagcggaaa
aagctacagaaggcagcacttgggttgcaggactcggatgacgaggatgcaggcatggac
attgaccagaagattgaagatatgttcgccagtcggaagcgtgtgacagatgtggccaag
ccaatagccaatcagcagacacaacagcagcagagcaatcagcagaaactggagctggcc
aaacgattggctgctcgtatcaacatgcagctcaaccttggacctgatgcccaggatatt
acccagcaggcagcagcagctatattgaagggagattcagtagctgctccacaagttgct
tccaagacaattgcagagcagatggcagagaagatccacgcaaagatcgggtaccggcca
caggcagaggaagagaaagaacaggaatcggcgggtgagactttcaaacgctatgaggaa
gagctggacatcaacgacttccctcagacagccaggtggaaggtcacatccaaggaagcc
ctggctcagatctgcgagtactcggaggctggcatcacggtgagaggaacctacgtgccc
aatgacaaggatctgaaggaaggagagcggaagctgtacctggctatcgaggccacaagt
gaacttgccatctccaaggcgaagaaggagattacacgtctcatcagggaggagcttgtc
cgactgcaaaattgttatattccaaatgccaacaagaatcgctacaaagtgctgtaa
DBGET
integrated database retrieval system
