Haliotis rubra (blacklip abalone): 124289367
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Entry
124289367 CDS
T07967
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124289367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrj03021
]
124289367
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124289367
Transcription machinery [BR:
hrj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124289367
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124289367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCHC_3
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
124289367
NCBI-ProteinID:
XP_046581942
LinkDB
All DBs
Position
Unknown
AA seq
261 aa
AA seq
DB search
MQEVVAPVYNITFDIEVALDQQLGALPLPFPGMDKSGSATCIFHLRHQCNKGTACPFRHV
RGDRTVVCKHWLRGLCKKGDDCEFLHEYDMSKMPECYFYSKFGQCSNKECPFLHIDPEKK
MKDCPWYDRGFCRHGPNCKNRHVRRLICQSYVNGFCIEGPNCKYQHPKFDLPVSDPVQLA
KKASIVCHFCGETGHKVLNCTKMPNNVKMEQMMMNQQMNDASIGDQRRPLDQVTCYKCGE
KGHYANKCTKGHLAFLSSSAT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagttgtggctcccgtgtataacataactttcgacatagaggttgctttagat
cagcaactaggggctctaccgttgcctttccctggcatggacaaatctgggtcagcaaca
tgtatatttcatctccgacatcagtgcaacaagggcacagcatgtccattccgtcatgtt
cgaggcgacagaacagttgtgtgtaaacattggctgcgtggactctgcaagaagggagat
gactgtgaattcttacatgaatatgacatgtcgaagatgccagagtgttatttctactcc
aaatttggacagtgtagtaataaagaatgtccctttcttcacattgatcctgaaaagaaa
atgaaagattgtccatggtatgacagaggtttttgtcgtcatggtcctaattgcaagaac
agacatgtgaggagacttatctgtcaaagctacgtcaatggcttctgtattgagggaccc
aactgtaaataccagcatcccaagtttgacctgccagtgagtgacccagtccagctggcc
aagaaggcctctattgtctgtcacttctgtggggagacaggccacaaagtgctcaactgt
accaagatgcccaacaatgtcaagatggaacagatgatgatgaatcaacagatgaatgat
gcttccattggtgatcaacgtcgacctctcgatcaagtcacgtgttacaagtgtggcgag
aaaggtcactatgccaacaagtgcaccaagggtcatctggctttcctcagctccagtgct
acatga
DBGET
integrated database retrieval system
