Haliotis rubra (blacklip abalone): 124290371
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Entry
124290371 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03013
Nucleocytoplasmic transport
hrj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124290371
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124290371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124290371
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124290371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Nup153
Motif
Other DBs
NCBI-GeneID:
124290371
NCBI-ProteinID:
XP_046583033
LinkDB
All DBs
Position
Unknown
AA seq
1597 aa
AA seq
DB search
MATEGGGKIKPKRSHSTSKPYERRKSLLGKVTDTVKDLLAPSWLTDFVSTVSKKTPPKDK
KDAFIEEEEDVFMELRKHFEGFWQLALLSQPSQLNNVRKPPRMQQQQERDKRNAVPAPRS
ATATAATHLDPAVPSTSLAPPQPSFSSSHLPFSKFTQQKSRIPNDDTMSERSDVSRSTSG
CSSMIPHPDKQAYQREILQLNDSALDMLKTDFQTAEVFQPPRGGQAAQKDMPAQRSQPIA
PKMFETFVNPPKTWTAEASSSRQGRPLAPAVREKPGFNTSLFGSPVLNQSSSILGESFGE
SSFYSGKTTYGGASAYRKLNSTAPYQTALPIRKQLKPKPLNNSFNAVTSSTARRILETLE
RMSTPLSDAKKIPASESFLTDSVLSFTPGSYRRRSLRPLTGVGATRRSLDVPKGPPTSQL
KTPSIASISKNRQKLLSSTPTSSRIPEPKIKNQDSGEEDEDSSHEDEPVVIDDWPGGGGG
KGGKMMREKSYRSSARRKPGEDEEEEVEPPPLKTDFTLPVMSMPAFNFKPTPGLAKKDKT
VSRPVEGDKAANLKFTFSTPIQKSGPSGSTTSERAEGFKFSSPLKVTDKESLPKSSTFTA
IGGSQPAFKPLLNSSVTAPVCKLGNGGIGMNMKPPVSSGQAFKPAEVLKKGSVMDVLGGG
AFKPSSDLKQGSVMDVLGKDGPKSTGVASQLKSGSVMDILGKTSNDTSSSPSGFKPALQL
KEGSVMDILGKGKDKTPVSSNPMTKFCKKPGEWDCDTCLVQNKSEATKCVACGTSKPGSG
PKPPSIRKGSLSSGQPSLSSMFKPSAGSWDCGTCMIQNKPEDTKCVACSTPKPGAAATGT
GSLSSGQPSLASMFKSSAGSWDCGTCMIQNKPEDTKCVACKTPKPGASTTGKETGSLSSG
QPSLASMFKSSAGSWDCDTCMIQNKPEDTKCVACSTPKPGAAATGTPETKTSSTISASGF
QISGTLFGSGTASSGGGFGGFGKSASSIGGFSMGSTDSKNAGSEGGFKIGSGFSFGSTKG
SDLKSPSSDSGAKDGGSSNKGDSNNVSNVLSSQKTSSISGGFQFGTVIKNPVQELEGIVN
SSFKSSTETQVSESKSSGFGFGVSASEASKTSASSEPSGTDSSNGKLAFGQKSDSTAEKK
NDNIFGSVNSLSGGTGFSFGQSGATSVASSPGGFSFGATAAATTATSNTTSKGIASSGFS
FGQDKTDSKPVFGTTQSAATEGSKSAAAATTNSSLFTFGQPVAGGNTDNNKPLGVGGGFP
FTANTDTSTAAAAAAPKRGRDEETGAPVAKKSFSFGQSTNSTSTGGFSFGASASATTASG
VFTFGASSTSSASTAAGTGTTTSTPSFSFGAAQPAPPANTPFQFSAQTASSGTNSVFQFG
SNSAGPQTGFSFGSSTPVTTAAPFGTTNTLPQPAFGNTANSTPQTGAQGGGMFSNSTSVF
GANNSATPVPAFGAADQNANSGGFSFKMAGTNNQSSSTLNSQPSFNFGGGGSGGVFQFTA
KGNETSAGAPAQGSTSSGFSFGGTQQPQPAAPAPTFNSTNTMSFTGGNTPSFTIGSTPEP
GEKNQTCSKENPEIERILLYSLTLGVSSSHPDEELGG
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgaagggggtggcaagattaaacctaaacgcagccactcgacttcaaagcca
tacgaaagacgaaagtcactcttgggtaaggtgacggatactgtaaaagatttgcttgct
ccatcatggttgacggattttgtatcaactgtgtcaaagaagactcctcccaaagacaag
aaggatgcttttatagaggaagaggaagatgtgttcatggaattaaggaaacattttgaa
ggattttggcaattagccctgctcagtcagccatcacagctgaacaatgtaaggaaacct
cctcgcatgcagcagcagcaggaacgtgacaagcgcaatgcagtgcctgcaccccggtct
gcaactgccacagctgcaactcacctggaccctgccgtcccatcaacatccctggcgcca
cctcagccatcattcagctcatcacatctgcctttctcaaagtttacccagcaaaaatca
agaatcccaaatgatgacaccatgtcagaacgaagtgatgtgtctcgatccacaagcggg
tgttcgtccatgattcctcacccggacaagcaagcctatcagagggagatccttcagctg
aatgattctgctctagacatgttgaaaacagactttcaaacagctgaagtttttcagcct
ccaaggggtggtcaagctgcacagaaagatatgccggcacagaggtctcagcctattgcc
ccaaagatgtttgagacatttgtcaatccaccgaagacatggactgcagaagcatcatca
tcccgccaagggcgtcctttggccccggctgtcagggagaaaccaggcttcaacacttca
ctatttggttcccctgttctgaaccagtcctcatctatactgggtgaaagctttggggag
tcatccttctattctggcaagacaacatatggaggtgcatcagcctacagaaaactcaac
tccacagctccctaccagactgcactgccaattcgtaaacaactgaaaccaaagcctctc
aacaacagcttcaatgcagtgactagttccactgccagacgaatcctggaaacactggag
cgaatgtctacacccctctcagatgcaaaaaagatccctgccagtgaatctttcctgact
gattctgtgttgtcattcacacctggcagttacagaagacgatccttacgtccactcact
ggtgtcggggcaacaaggaggtcactagatgtacctaagggcccccctaccagtcaactg
aagactccttccatcgcgtctatttccaagaatcgccagaagctcttgtcgtccacgcca
acgtcctctcggataccggaaccaaagataaagaatcaggacagtggtgaggaagatgag
gacagcagtcatgaggatgagccggttgtgatagatgactggcctggaggtggaggaggc
aaagggggcaagatgatgagggagaagagctatcgttcctccgctagacggaaaccggga
gaagacgaggaagaagaggttgagcctccaccactcaagacagacttcaccctacctgta
atgagtatgcctgcattcaacttcaagccaacaccgggtttggcgaagaaagataagact
gtgtcgcgacctgtggagggggacaaggctgccaacctcaagttcacattttcaacccca
atacagaagagtgggccttcaggttcaacgacttctgaaagggcagagggtttcaagttc
agttcccctctcaaagtcacagacaaagagtccttgcctaaatcatccacattcactgcc
attggtggtagtcaaccagcttttaaaccattgctgaattcctcagtcactgcacctgtc
tgcaagctaggaaatggaggtattggcatgaacatgaagcctccagtgagcagtggacag
gcttttaaacctgctgaagttctgaagaaggggagcgtgatggatgtattaggtggaggt
gctttcaagccttcctcagatctgaaacaagggagtgtgatggacgttcttgggaaagat
ggtcccaagtctactggagtagcaagccagttgaagtctggcagtgttatggacattctg
gggaaaacttccaatgatactagttcttcaccatcagggtttaaacctgcactgcaactg
aaagaggggagtgtcatggacatcttaggcaagggaaaagacaaaactccagtttcaagt
aaccctatgaccaagttctgcaaaaagccaggggaatgggattgcgacacctgtcttgta
cagaataagtctgaggccactaaatgtgtcgcatgtggaacttccaagccggggtcgggg
ccgaaaccaccttccatcagaaaaggatctctgagttctggccagccaagcctgtcgtcc
atgttcaaaccttccgctggaagttgggactgtggcacatgcatgattcagaataagcca
gaggataccaaatgtgtggcctgcagtactcccaagcctggagctgcagcaacaggtacc
ggatctctgagttctggccagccaagtctggcatccatgttcaagtcgtcggctggaagt
tgggactgtggcacatgcatgattcagaacaagccagaggacacgaagtgtgtggcctgt
aaaactcctaaacctggagcttcaacaacaggtaaagaaacaggatctctgagttctggc
cagccaagtctggcgtccatgttcaagtcgtctgctggaagttgggactgtgacacgtgc
atgattcagaacaagccagaggacaccaagtgtgtggcctgcagtactcccaaacctgga
gctgcagcgacaggtacaccggagacaaagacaagcagtacaatcagtgcatctggattc
caaatcagtggaactctgtttggcagtggaacagcttcgagtggaggagggtttggtggc
tttggcaagtcagcttcatccattggaggcttcagcatgggatcgacagattcaaagaat
gctggttcggaaggtggatttaaaattggttctggctttagttttgggtccactaaggga
agtgacttgaaatctccatctagtgacagtggagctaaagatggaggaagttctaataaa
ggtgattcaaataatgtatcaaatgtacttagctctcaaaaaacttctagtatatcaggt
ggctttcaatttggaaccgtcattaagaatccagttcaagaattggaaggcattgtgaac
agttctttcaaatccagcacagagacccaagtgtctgaatctaaatcgtcagggtttgga
tttggtgtgtcagcatctgaggccagtaaaacaagtgcttctagtgaacctagtggaaca
gactcatccaatggaaaattagcctttggacaaaaatcagactctactgcagagaaaaag
aatgataatatatttggttcagtgaattccctgagcggtggaacaggttttagttttggt
cagagtggagccacatcagttgcttcttcacctgggggattctcgtttggagcaacggca
gccgccacaacggctacatctaacacaacatctaaaggaattgcatccagtgggttttcc
ttcggacaagacaagaccgacagtaagcctgtgtttggcactactcaatctgctgctacg
gaaggtagcaagtcagctgctgctgccaccacgaacagctccctgtttacattcggtcaa
ccagtcgctggcggcaacacagacaacaacaaacctctgggagtgggtgggggattcccc
tttactgccaacacagacacatcaacagcagcagcagcagcagccccgaaacgaggacgg
gatgaggagactggagctcctgtagccaaaaagtccttctcgttcgggcagtccacaaac
tctacctcaacaggtggcttcagcttcggtgcgtcagcatctgcgacaactgccagtggc
gtctttaccttcggtgccagctccaccagcagtgcatcaactgcggcagggacagggacg
acaacttcaactccatcattctcatttggagctgcccagccagcacctcctgcaaacaca
cctttccagttctccgctcaaacagcatcctccggaaccaactcagtattccagttcggg
agcaactccgctggaccacagacagggttttcattcggttcctcaaccccggtaacaact
gcagcaccgttcggcacaaccaacacgcttcctcagccagcatttggcaacaccgccaac
agcacccctcagaccggagcccagggtgggggtatgttcagtaactctacgtcggtgttt
ggagccaacaatagtgccacgccagtgcctgcattcggagctgcagatcagaacgccaac
tcaggaggtttctcattcaagatggcaggcacaaacaaccaaagttccagcactcttaac
tctcagcccagcttcaactttgggggaggaggaagtggaggggtgttccagttcactgct
aaagggaatgagacatctgccggagcaccagcccagggatccacatcgtcagggttttcc
tttggtggtacccaacagcctcaaccggcagcccctgccccaaccttcaactccaccaac
accatgagctttacaggtggcaacactcccagcttcaccatcgggagcactccagaaccg
ggggagaagaatcaaacgtgcagtaaggaaaatccggaaatagaaaggatattgctgtac
agtctcacattgggtgtaagctcttcccaccctgatgaagaactgggtggatga
DBGET
integrated database retrieval system
