Haliotis rubra (blacklip abalone): 124290522
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Entry
124290522 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DBP2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124290522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrj03041
]
124290522
03009 Ribosome biogenesis [BR:
hrj03009
]
124290522
Enzymes [BR:
hrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124290522
Spliceosome [BR:
hrj03041
]
Complex A
U1 snRNP components
U1 related factors
124290522
Complex B
124290522
Ribosome biogenesis [BR:
hrj03009
]
Eukaryotic type
Pre-60S particles
Helicases
124290522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124290522
NCBI-ProteinID:
XP_046583225
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MTSVLTGSLLRHLARAQSLRKPATALVGHSFSTDMSYRDRMFDSSGRSDRKGFGGRSDRG
GGSRFGGRDSGRGGGSFDRYGSGGGMGRGGSRPSLKGIQPGERLRKPRWDMERLPKIEKN
FYREHPNVVNRSPEELQAFYNENQITIRGRDVPKAILAFDEANIPDYVMHQIRRNNWQKP
TPIQSMGWPVALSGRDCVGIAQTGSGKTLGFILPAIIHITNQPYLEPGDGPICLVLVPTR
ELAQQVQEVANEFGHASKVRNCCVYGGAPKGPQIRDLERGAEICIATPGRLIDFLEAGKT
NLRRTTYMVLDEADRMLDMGFEPQIRKIIEQVRPDRQTLMWSATWPKEVRKLAEDFLKDY
CQVNIGALQLSANHNILQIIDVCQEYEKENKLVKLLEGIMQERDNKTLIFMETKRKCDDL
SRRMKRDGWPVMAIHGDKSQQERDWVLNEFRTGKTPLLIATDVASRGLDVEDIKFVINFD
YPACSEDYVHRIGRTGRSNNTGTAYTFFTPSNSKQVNDLVSVLREANQNINPKLLQLAES
NRGSMGKGRSRWKGRDDRSGRDSRGSYRDHDSYGSRDRGRGGSGYGGSSYGDSYGGGSMG
GGSSQGGFGQASRDSSSGSRGGYSNSSSRGGFSQRTESRFSGQSQAGAAPKNNFNQGASR
GGMAPKPQSVVQQPQYGQPRQPHMNGYGGAGAAGAAATPSAAPAAAPKPPQSQQQPQQGG
PGKMQDLQNMAFMYSQWMQHSTGAPPPPPSGPVAPPPPPPPGY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagtgttgaccggctcactacttcgccatcttgcgagagcccagtcattaaga
aaacctgccacagccctagtaggtcactcattctcaacggacatgtcatacagagataga
atgttcgactcatcgggtagatcagacaggaaagggtttggtggcagatctgatcgagga
ggcggatctcgttttggaggtagagatagtggtcgaggtggtggaagttttgacagatat
ggatctggtggtggtatgggtcgaggtggtagcaggccatccctcaaaggtatccaacct
ggtgaaagactgaggaaacccagatgggatatggaaaggctccccaagattgaaaagaat
ttctacagggaacatccaaatgtagtgaatcgatcacctgaagaactacaggctttctac
aatgagaatcagatcactattaggggacgagatgtaccaaaggcaatccttgcttttgat
gaggcaaacattccagactatgttatgcaccaaatcagaaggaacaactggcaaaaacca
accccaattcagagtatgggttggccagtcgctctttcgggcagagattgtgttggaatt
gcacagacaggatccggcaagacactagggtttatcctgccagctatcatccacattaca
aatcaaccctacctcgaacctggggatggaccaatttgtttggtgctggttccaacaaga
gagttagcccagcaggttcaagaagtagccaatgaatttggccatgcatccaaggttcgc
aactgctgtgtgtatggtggcgctccaaagggaccacagatcagagatctagaaagagga
gctgaaatctgcatagcaactcctggaagattgattgacttccttgaagctggaaagact
aacctgagacgaacaacatacatggtccttgatgaagcagacagaatgttggacatgggc
tttgagccacagatcagaaaaatcattgaacaagttcgaccagacagacagaccctcatg
tggagtgccacatggcccaaagaagtgcgaaagctggcagaggacttcctgaaggactac
tgtcaagttaatataggagctttgcagcttagtgctaaccacaacatcttgcagataatt
gacgtgtgccaagaatatgagaaggagaacaaacttgtgaaactccttgaaggcatcatg
caggagcgggacaacaagactctcatattcatggagaccaagaggaaatgtgatgactta
tctcgacggatgaagagagatggttggcctgtcatggcaatccatggagataaatctcag
caagagagagactgggttctgaatgaattcagaactggaaaaacaccacttctcattgcc
acagacgttgcctcccgtggcttagatgtggaagacattaaatttgtgataaactttgac
taccctgcctgctctgaggactatgtacatcgcattggccggacaggccgcagcaacaac
actggcactgcctacacattcttcacacctagcaatagcaagcaggtgaacgacctggtc
tccgtgctccgggaagccaaccagaacatcaacccaaaactacttcagttggccgagtca
aaccgagggagcatgggaaaaggtcgaagcaggtggaagggtagagatgacagaagtggt
cgtgacagccgtggaagctacagagatcatgatagctatggcagtcgagatagaggacgt
ggtggttcaggttatgggggatcaagttatggggatagttacgggggtggcagcatggga
ggtggtagcagtcagggtgggtttggtcaggcatcgcgagatagttcaagtgggtccagg
ggaggatactcaaatagttcaagtaggggtgggttcagtcaaagaactgaaagcaggttt
tcaggtcaaagccaagctggagcggcaccaaagaacaatttcaatcagggggcttcaaga
gggggaatggcacccaaaccacagtcagtagtgcagcagcctcaatatggacaaccgagg
cagccacatatgaatggttatggtggagctggtgctgcaggagcagctgcaacaccatct
gcagctccagcagcagcacctaaacctccacagtcacagcaacagccacaacagggagga
ccaggaaaaatgcaggatttgcagaacatggcctttatgtatagccagtggatgcagcat
tccactggtgcaccaccacctcccccatctggccctgtggcaccccctccccctccccca
cctggttactag
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