Haliotis rubra (blacklip abalone): 124290986
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Entry
124290986 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(I) chain-like
KO
K06237
collagen type IV alpha
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04382
Cornified envelope formation
hrj04512
ECM-receptor interaction
hrj04518
Integrin signaling
hrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124290986
04518 Integrin signaling
124290986
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124290986
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124290986
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrj04147
]
124290986
00536 Glycosaminoglycan binding proteins [BR:
hrj00536
]
124290986
Exosome [BR:
hrj04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
124290986
Glycosaminoglycan binding proteins [BR:
hrj00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124290986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
cEGF
EGF_CA
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_3
TNFR_nem
C1orf162
Motif
Other DBs
NCBI-GeneID:
124290986
NCBI-ProteinID:
XP_046583803
LinkDB
All DBs
Position
Unknown
AA seq
1501 aa
AA seq
DB search
MAVAVVMADTVEAMSHTTSIGFSASTPGIQYYDEGGNALFINMAFPLVSGRLLQICFYIH
KNFDNNYTGTFFVFQQNTRGYRLVFQQNVVFPKTQGRHCVNMTEPPLVRKGQFLGWRYDK
DAGPISYTIPDQEIGTMVVNNVPAPMVVGLTYGSRSFIKTYFFKVEAIIELGLTGSTGPA
GIIGATGPDGRPGLTGPTGQKGDQGAKGTVGPPGTQGVTGSPGQKGDVGEQGVSGLPGPP
GQQGPAGTIGSAGNTGKDGVTGRPGPPAERGETGSPGSRGMRGDAGQTGMAGVTGVPGAR
GSSGEPGRDGTPGMPGITGQMGYSGMTGVRGLPASAGMTGQRGPTGIQGDPGMTGFPGPA
GRPGTQAGPGSTGQTGIPGIEGSTGPPGRPGPAGSMGIPGTMGPVGFPGTSGATGLHGDR
GGDGVTGQSGSPGQPGLAGPPGDIQCIMSTWVVWFYRPLGTTGETGLRGPPGFDGAAGWS
GAAGVTGPAGATGALGSPGTTGFTGVPGSQGDPGVTGPDGATGAGSTGQTGTTGASGRDG
MPGAMGYTGTPGMTGYVGATGAEGVIGQPGVPGAVGVTGTSGLTGPAGMTGPGGHTGQQG
PAGARGATGVGGADGMAGKTGPAGITGMSGHPGTPGSDGASGSPGQTGVTGNLGNDGSAG
VTGQSGLQGVSGIPGMSGDPGPPGMSGGQGPQGDAGMTGPFGQTGLPGETGMAGLKGGTG
AMGSSGPAGQTGPIGHSGMPGITGMSGEMGKDGEPGVNGTDGAPGVTGPAGPVGASGAVG
ASGVAGPQGPNGSTGPRGATGVAGPVGMSGSAGSVGDTGMTGVRGSEGPVGTTGAAGMTG
LTGSDGVPGGTGPDGVTGLDGVSGQTGLPGSDGMPGVTGSVGDTGPQGMRGYRGFNGSDG
PPGASGINGYNGTKGDDGMTGATGGVGATGPGGTIGYTGQSGLTGAPGAMGVTGPAGVDG
MTGLTGMQGLRGQPGAQGITGVSGLQGPSGSAGMKGDIGVTGQQGIPGNERXGATGQAGP
EGATGLMGPSGINGSSGAAGLQGIAGPAGMTGTPGVSGSIGLTGMSGTPGVNGIPGSNGT
SGQDGLPGAPGSPGETGTDGPPGVSGSTGISGSIGPTGEAGIPGSTGSPGMIGPVGISGM
TGESGPRGYSGVPGVSGTTGLQGSAGETGTSGIPGHIGPPGLPGTVGATGVSGSVGPNGT
TGQTGPRGEMGAVGYTGSTGKQGPLGFQGDAGITGWSGPRGLDGVTGNTGSAGPAGMTGI
TGPEGKLYEYPDFCNSSSCEHLCINIGDSFECRCRDGYKLTADNSSCDDVNECTMYGPCE
HLCNNTVGSFVCSCRPGFNLSSNNRNCEDFNECEHNMCSSVGYSGTPVCINTMGSFHCIG
FTPISLNNVEEYSEDGPNAAEGLSDSPQGRSFPNNLASTTYVLTILVGCLLGAVVLIALA
LILLAYRTRTSRPRQPNPPTVYRLHPDMCEPRRNTPQRRDVESGALREQSYVNQPHPGMT
L
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgcagttgtcatggcagacactgtagaggccatgtcccacacgacgtccatc
gggttctccgcctctacccctgggatacagtactatgatgagggtggtaatgcgctgttc
atcaacatggcgtttcccctggtgtctgggcggttactccagatctgcttctacatccac
aaaaatttcgacaacaactacacgggtacgttcttcgtcttccaacaaaacaccagagga
tacagacttgtcttccagcagaatgttgtctttcctaagacgcagggcaggcattgcgtc
aacatgaccgagcctccattggtcagaaagggtcagttcctgggatggaggtacgacaag
gatgctggccccatctcctacaccatcccggaccaggagatcggaactatggtggtcaac
aatgtccccgccccaatggttgtagggctgacctatgggagtcggagcttcatcaagacc
tacttctttaaagtggaggccattatagagctcggtctgaccggctcgactgggccagcc
gggatcattggtgccacgggtccggatggacgccccgggttgacgggtccaactggacag
aagggtgaccagggtgccaagggaacagttggaccacctggaacacagggtgtcactggc
agccccggacagaagggcgacgtgggtgagcagggagtatcagggctccctggaccccca
ggacagcagggaccagccggtaccataggcagtgctggtaacactggaaaggacggagtc
acgggtcgccctggccctccagcggaacgaggtgaaaccggaagtcctgggtcacgtggg
atgcgcggggacgctgggcaaacggggatggcaggagttactggcgtgccaggtgctagg
ggatcttcgggcgagcctggcagggacgggacaccaggaatgccaggaattactggacag
atgggatattctggtatgacaggcgtcagaggcttgccagcgtcggcaggaatgaccggg
cagagagggccaacaggaatccaaggagacccgggcatgacgggattcccaggccccgca
gggagaccaggaacacaggcaggaccgggcagcacggggcagactggcatcccggggatt
gaaggatccactggtccaccagggcgtcctggacccgcaggcagcatgggcataccagga
acaatgggtccagtaggattccctggaacatctggagcgaccggacttcatggcgacagg
ggaggtgatggagtaactgggcagtccgggtctccggggcagccaggactagcaggtcct
ccaggtgatattcagtgtataatgtccacgtgggtcgtctggttctaccggcccctgggt
actacaggagagacagggttgagaggtccaccagggtttgatggtgctgctggctggtca
ggggctgcaggtgtaaccggaccagcgggtgcgaccggtgctctgggttcacccggaact
acggggtttacaggggtacctgggagccagggcgatcctggcgtaactggcccagatggc
gcaacaggtgccggcagcactggacagacgggaacaacaggggcctcgggcagagacggg
atgccaggggccatgggatatacgggcacaccaggaatgactgggtatgttggggcaacg
ggtgcagaaggtgtaataggccagcctggtgttcctggagctgtaggggtgacggggacc
tcgggccttacaggccctgcaggaatgacaggccctggtggacacactggtcagcaaggt
cctgcaggggcccgtggggcaacaggagttggtggtgcggacgggatggctggcaagaca
ggcccagcaggcattacagggatgtctggacatccaggtaccccgggtagtgacggtgcc
tccggcagcccgggacagactggagtgactggcaacctagggaacgatggttctgcagga
gttactggccagtcagggctgcagggtgtttcggggataccaggcatgtcgggggatcca
ggaccaccagggatgtcgggaggacaaggacctcaaggagatgctggcatgacaggacct
ttcggacagacaggtttaccgggagaaacaggaatggcaggactcaaggggggcacaggt
gcaatgggatcttcaggcccagcgggacaaacagggccgattggacacagtggtatgcct
ggcatcacggggatgagtggagaaatgggcaaggatggagagccgggtgttaatggcacg
gatggagctccaggggtcactggaccagctggtcctgttggggcttctggagctgttggt
gcatctggcgtagctggaccacagggaccaaatggctccactggtcctcgaggtgcgaca
ggtgtagctggccctgttggtatgtctggatcagctggaagtgttggagacacaggcatg
acaggtgtcagaggctcagaaggaccggtaggaaccacaggagctgctggcatgacagga
cttactggcagtgacggtgtacccggaggcacaggacctgatggtgtgacaggacttgat
ggtgtaagcggtcaaacaggtctgccaggttctgatggaatgccaggcgtcactgggtca
gttggggatactggtcctcaaggtatgagaggatataggggtttcaatggttccgatggc
cctccaggtgcatctggtataaatggatataacggaacaaagggcgatgatggcatgact
ggtgctacaggaggggtgggggcgacaggtccaggtggaacaattggatatactggacag
tcaggattgacaggagcacctggtgccatgggcgtcactggtccggctggagtagatgga
atgacaggtctaactggaatgcaagggctacgaggacaaccaggtgcacagggcattaca
ggggtgtctgggttacagggtcccagtggaagtgctggcatgaaaggcgatataggggta
actggtcaacaaggaataccaggaaacgaaaggtgaggcgcaacgggacaagcaggtcca
gagggagctacagggttaatgggcccatcagggattaatggatcatcaggagcagctggt
ctacaaggaatcgccggccctgctggtatgaccggtacacctggtgtttcagggagtata
ggtttaaccggaatgtctggtacaccaggcgtaaatgggatacctggctcgaacggcact
tctggtcaggatggtttgccaggagcacccggctcacctggggaaactggaaccgatggt
ccacctggagtgtctggcagcacggggatttctggttctataggtcctactggagaagct
gggattcctggttctactggatctcctggtatgattggtccagttggtatcagtggaatg
actggggaatccggacctcgggggtactctggagttcctggagtgtccgggacaacaggg
cttcagggatctgcaggagaaactgggacatctggaataccaggacacataggaccacca
ggtctgcccggaacagttggggccacgggcgtgtcagggtctgtgggccccaatggtacg
accggacagacaggacctaggggtgaaatgggggcggttggctacaccggcagcaccgga
aaacaggggccactaggattccagggggatgcgggaatcacaggatggagtggaccaaga
ggattggatggagtgactggtaatacaggcagtgcaggcccagctggtatgacaggtatt
actggacctgaaggcaaactctatgaataccctgatttctgcaactccagctcgtgtgag
catctctgtatcaacatcggcgacagtttcgagtgtcgctgtcgggacggttataagttg
actgccgacaacagctcctgtgacgatgtgaatgagtgcacgatgtacggaccatgtgaa
cacctatgcaacaacactgtcgggagttttgtctgcagctgtcggccaggcttcaacctg
tcatccaacaacagaaactgtgaagatttcaatgagtgtgaacacaacatgtgctcatcc
gttggctacagcgggactcccgtttgcatcaacactatgggatcatttcactgcattggg
tttacgccaatctccctgaataatgtcgaagaatattctgaagacggaccaaacgccgcc
gaaggtctgagcgactctccacaaggtcgttcgttcccaaacaaccttgccagcaccacc
tatgtgctcaccatcctcgtgggctgtctactgggggccgtcgtcctcattgcccttgcc
ctcatcctcctggcctacaggacccggacgtcccgcccccgccaacccaacccacccacc
gtgtaccgactccaccctgacatgtgtgaaccgcggaggaacaccccccagagaagagat
gtggaatccggggctctgcgtgaacagtcctacgtgaatcaaccgcaccctggcatgacg
ttatga
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