Haliotis rubra (blacklip abalone): 124291199
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Entry
124291199 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: PMS1 protein homolog 1-like
KO
K10864
DNA mismatch repair protein PMS1
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124291199
DNA repair and recombination proteins [BR:
hrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
124291199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HATPase_c
HMG_WDHD1
HMG_box_2
RRF
RICH
Motif
Other DBs
NCBI-GeneID:
124291199
NCBI-ProteinID:
XP_046584089
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MAGASSLSALPANTVRLIGSTQVITSVFSVIKELIENSFDAGSTSIDVKLENYGLDKIEI
RDNGSGIKLQDVEFVAQRHYTSKISCHADLESLTTYGFRGEALASLCALSDVSVTTKTAD
DDVSTTYSLTNQGQISDKKPSHLAPGTTVTASHLFRNLPVRKQYHNTARKKKEELKKIED
LFICYGVIRPDVRLSLRHNKESVWQKNVLPDPKAVLLSVLGRNVMNKLIKKECHETDPVV
DVVMYIPSPGSDVQVMSRASTDRCFMAVNARPVDVKEIHKLIRQYYCTCHSVDTLRHPVY
YISVNIPPSQVDVNVEPNKTKVMLQHMDVVKKCIEAELLYVYGPLDNQPSWKYKDPDPRS
RTVMRSIILRSRKRSQSTFPKKLSKDDVVDIDNVPDCDETMIKETPSCKKSLNNNNEDNN
GFSDSDFEISFMEFGDESVSKDKQLPASDPGGSISASNPSSKHGEDKDTAQLTSDVSQLI
SDASVKDVVGSEHPPEGNKDVVDSEHAADGDKDVVDSEHAADGDKDVVDSEHAADGDKDV
VDSEHATDGALDKVISESCLNSSQEVVPVGVGEFSISDDVLDDTFSATQQQKRLNPCLVT
STKKVSDAVSHDPGNNLDIDLTKESVSGESWSRGQGLVSTSGQPVQPVTLLPPTTNHTPG
KRPPSPSHDASFIKQLGPPEKKRAVGEKVKTMLQGQTTLYDLVGNETVKRQSAFQLFVKD
RTQDVVEEHPDADQDEIGAILKQTWSTMPESQKQKYRTHVWDMYKNEEREKEFSTKGKKK
VEKGRSSVRDHLVSSSKNLKKSNDQTEHTKVRDLAFNLEDLKNKYTSDFRQSQSQVSHTS
KLTLIGPLKSCGSWVCSRGNKILLANPHRLAETILYHRLLTQHQLAPRPVDTPIPLTVRS
LGDESLMTTLESLAKENWTPGPYVNIGDERITANGFSIRCRRDVDGQFQAELVGLATNIP
MYGVADLSEVLDLITNTDASTLKQARPLKVINFLKGEAVRMMRQSSAERDRDDLLELLHQ
MEVDLPEGCCRCLHDKTFFHQVSDKTFFHQVFDVGSVPVACDDTLTQASQD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcgagcagcctttcagccctcccggcaaatactgttcgccttattggaagt
acacaagtgataacatctgttttcagcgttatcaaagaactaatcgagaattcgtttgat
gctggatcaacaagtatcgatgtcaaattggaaaattatggtcttgacaagattgaaata
cgagataacggaagtgggatcaagctacaagatgtggagtttgtggctcaaagacattac
acatccaagatatcctgccatgctgatctagagtcacttacaacatatggcttcagaggg
gaggctctagcctctctatgtgctctatctgatgtttctgtgactaccaagactgctgat
gatgatgtcagtacgacctacagtctgaccaaccagggacagatctccgacaagaagcca
tctcaccttgcaccaggcaccacggtgacagccagccacctgttccggaacctcccagtg
aggaaacagtaccacaacactgccaggaagaaaaaggaagagttaaagaaaatcgaagac
ctgtttatatgttatggtgtgatccgtcctgacgtccgactgtctctccgtcacaacaag
gagtcagtgtggcagaagaacgtgttgcccgaccccaaggccgtgctgctgagtgtgttg
gggagaaacgtgatgaataagctcatcaagaaggaatgccacgaaactgatcccgtggta
gatgttgtgatgtacatcccctcccccggctcggatgtccaagtgatgagtagagcgtcc
acagacaggtgtttcatggctgtcaatgcaagacctgtcgatgtcaaagaaatacacaag
cttattcgccagtactactgcacctgccacagtgtcgacacacttcgtcaccctgtctac
tacatctctgtgaacataccacccagccaggtggacgtcaacgtcgaacccaataaaacc
aaagtcatgctgcaacacatggatgttgtcaagaaatgtatcgaagctgagcttctgtac
gtgtatggtcccttggacaatcagccatcatggaagtacaaagatccagacccaaggtca
aggacagtgatgagatcaataattctgaggtcaaggaaaaggtcacaaagtacatttccc
aaaaagcttagcaaagatgatgtggtagatattgacaatgttccagattgtgatgagact
atgatcaaagaaactccatcctgtaagaaatcattgaacaataacaatgaagacaataac
ggtttctcagacagtgacttcgagatatctttcatggagtttggtgatgaaagtgtctcg
aaagacaaacagcttcctgcttcagatccagggggttcaatatctgcttctaatccttct
tccaaacatggtgaggacaaagatacagcacaacttacctcagatgtgtctcagctcatt
tcagatgcatcagtgaaagatgtagttggttctgaacatcctccagagggcaacaaggat
gtagttgattctgaacatgctgcagatggtgacaaggatgtagttgattctgaacatgct
gcagatggtgacaaggatgtagttgattctgaacatgctgcagatggtgacaaggatgta
gtcgattctgaacatgctacagatggggctttggataaagtcatttctgaatcttgtttg
aacagcagtcaagaggtggtaccggttggtgttggggagttcagcatcagtgatgatgtg
ttagatgatacattctcagcaacacaacaacagaaaagactcaatccttgtttggttaca
tctacaaagaaagttagtgatgctgtgtcacatgacccaggtaacaaccttgacattgac
ctgactaaagaaagtgtatctggggagtcttggagtagaggtcaagggttggtgtctacc
agcggacagcctgttcagcctgtgacactgttgccaccgacaaccaatcacacgccagga
aaacgtccaccatcaccttcccatgatgcatcattcatcaaacagttgggacctcccgag
aagaagagagctgttggggagaaggtgaagacgatgcttcaagggcagacaactctgtac
gacctggtgggcaatgaaactgtgaagagacaatcggctttccagttgtttgtcaaggac
agaacacaggatgttgttgaggagcatccagatgctgaccaggatgaaattggagccatt
ctgaaacaaacttggagcacgatgcccgagtcacagaaacaaaagtacagaactcatgtg
tgggacatgtacaagaatgaagaaagagagaaggaattctcaaccaaaggcaagaaaaaa
gtggaaaaaggacgtagctctgttagggatcatcttgtttcctcatcaaaaaacctcaag
aagtccaacgatcaaacagaacacaccaaggtcagagatttggccttcaacctggaagac
ctcaaaaacaaatacacaagcgatttcagacaaagtcaaagtcaagtttctcacacttcc
aagctaacactgattggtcccctgaagtcatgtgggtcctgggtatgtagccgtggcaac
aagattctcctggcaaaccctcaccgattggctgagactatcctgtatcatcgacttctg
actcaacatcagctggcacctcggcctgtggacacgcccatcccactgacagtcaggagc
ctgggagacgagagtctgatgacgaccttggagagtttggccaaggagaattggactcct
ggaccgtatgtaaacataggagatgagaggataacagccaacggcttcagcatcagatgt
cggagagatgtggatgggcagttccaggctgagctggttggcctggcaactaacattcca
atgtatggtgtggcagatctgtctgaagttcttgacctcatcactaacacagatgccagc
accctcaagcaggcacgacccctcaaggtcatcaactttctcaagggagaggcagtgagg
atgatgcggcagagctccgctgagcgagaccgggatgatctcctggagctcctgcatcag
atggaggtggatctccccgagggctgctgcagatgtctccatgacaagaccttcttccac
caggtgagtgacaagaccttcttccaccaggtgtttgatgtgggcagcgtgcctgtagcg
tgtgatgatacacttacacaggccagtcaggactga
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