Haliotis rubra (blacklip abalone): 124291565
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Entry
124291565 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: transcription activator BRG1-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124291565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrj03021
]
124291565
03036 Chromosome and associated proteins [BR:
hrj03036
]
124291565
Transcription machinery [BR:
hrj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124291565
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
124291565
Chromatin remodeling factors
BAF complex
124291565
PBAF complex
124291565
GBAF(ncBAF) complex
124291565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
QLQ
ResIII
BRK
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
124291565
NCBI-ProteinID:
XP_046584541
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MASGDDSNMMNTPPPGPTPSYPQDNVQMLQKAISQMEEKGMQGDPRYDQLMVMANRAKNM
PGGPGPHGMQGGPGGPGMAGTPPHGMTMGPQSQGMQGPMPGMHQGPQGMGGPMPGMGGPQ
PGMGASQQGMGGSQSRDGWASTGNAWWPTARNGWRAEHEWRISTGHEWWPSARYARRSSR
YARTWRHAPWRNGWSRSQHAGNMASQNMGGPNDGPMGAPGXTCLPNMNNPNVPTSSTSMS
QPSSNMGGPTVPNTSGSGGAMNTTMAGPGMNSGPGPMGPVSGNMGMGPNMPPHNMEGNQG
QGKIQGSAPQGMPPGQMPPGGPRPTAFSSAQLHQLRAQIMAYKLLARNQIIPDTLRLAVE
GKRPLGPFPRPADPHQMQQMRMQHQQQQQQQQQQQQSQQSSDPSQQPPQMQMRTMSSTAP
PSAIMSNGAQVPASTPDSGAPTPRPTQPSQPPPPSVQAMMALQQKQNRIAPVAKPQGLDP
IEMLNERENRLAARIGSRIQELSKMPATMPEDMRCKAMIELRALRLLNFQRQLRTDVVSC
MRRDTTLETALNTKAYKRSKRQSLREARITEKLEKQQKVEQERKKRQKHQEYLNAVLQHA
KDFKEFHRNVTAKISKLNKAVMTYHANTEREQKKEQERIEKERMRRLMAEDEEGYRKLID
QKKDRRLAYLLHQTDEYIDNLMKLVHEHKEDIRKKKRHRKKKKKRPKVPKEGQSGDALKE
GGDESSNMSEIHATVKETATGKVLSGEDAPTAGQLDSWLELHPGEMREAGGELTQVPPSK
AKKPRRQGKKSRSQSPSHAPSSGFDMSLITQMFQQHADSARSLAHESVEGSRRSSSPTLS
DSEADEPLPQPSILTENRPGTIATSPENLDEETANKIIQQASTKDEDDEYKNLENYYGVA
HTVREKVFEQASILVNGTLKEYQVKGLEWLVSLYNNHLNGILADEMGLGKTIQTIGLITY
LMEKKRVNGPFLIIVPLSTLSNWIIEFEKWAPSVIKIPYKGSPLVRRNIAPQLKGGKFNV
LLTTYEYIIKDKAILSKLRWRYMIIDEGHRMKNHHCKLTQVLNTHYIAPHRLLLTGTPLQ
NKLPELWALLNFLLPSIFKSCATFEQWFNAPFAMTGEKVELNQEETLLIIRRLHKVLRPF
LLRRLKKEVESQLPEKVEYVIKCEMSALQRFLYRHMQHKGVLLTDGSEKDKKGKGGAKLL
MNTIMQLRKICNHPFMFPHIEEAFAETAGSQGGIVTGPDLYRSSGKFELLDRMLPKLKMR
NHRVLLFCQMTSLMSIMEDYFVYRGFRYLRLDGTTKSEDRGHLLHLFNQPDSPYFVFLLS
TRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKAEVRVLRLMSVNSVEERIL
AAARYKLNVDEKVIQAGMFDQKSTGFERKQFLHEILMNEQNGEEEEDEVPDDETINQMLA
RTEDEFEVYQKMDIERRRNEAREGGKRKPRLMEIDELPSWITKDEEEVDRLTCEEEEDKL
FGRGSRQRKEVDYSDQLTEKQWLRAIEDGNLDEVEDKKRVTKKGRKRKPVDDDMDQTPKV
KKRRGRPPVEKMTPNPPKLTKRMKKILDVVINYKDSDGRVLSSMFMQLPSKKELPEYYEI
IRKAVDFRKIKQRIVDHKYRSIDDLENDVMLLCKNAQAYNVEGSVIYEDSIVLQSVFTSA
RERLEKEGMVSSDESAGSEDEEDMDDKDEQDDDADDDDSQHVKKHKLSKDSKKFLQTPSG
KQRGPKPRKAKAKPIISDDESEESDSDDDEVMPSRSSTRTSSPSPGHRKRRE
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggggacgacagcaacatgatgaatacaccacccccagggcctaccccatct
taccctcaagacaatgtgcagatgttgcagaaggctattagccagatggaagagaaaggg
atgcaaggagacccaagatatgatcaactgatggtcatggcaaacagagccaaaaacatg
ccaggagggcctggaccacatggcatgcaagggggaccaggtgggccgggaatggctggc
acccctccgcatggaatgaccatggggccacagtcacagggaatgcaagggccaatgcca
ggaatgcaccaaggtcctcagggaatgggtggtccaatgccaggtatgggtgggccacaa
ccaggaatgggtgcttcccaacaagggatgggtggatctcagtcccgggatgggtgggcc
tcaacagggaatgcctggtggcccacagcaaggaatgggtggagggcagaacatgaatgg
aggatctcaacagggcatgaatggtggccctcagcaaggtatgcccggaggtcctccagg
tatgcaaggacctggaggcatgccccatggaggaatgggtggtccaggtcccaacatgca
ggcaatatggcctcacagaacatgggaggtcccaatgacgggccaatgggggcacctggt
tgaacatgcctcccgaacatgaacaatcccaatgtgccaacaagtagtacatcgatgtcg
caaccatcatccaacatgggcggccccacagtacccaatactagcggtagtggtggtgcc
atgaacacaacaatggctggccctggtatgaactctggccctgggcctatgggacctgtt
tcagggaacatggggatgggaccaaacatgccaccccacaacatggaggggaatcaaggt
caaggtaagatccaaggcagtgccccacaaggaatgcccccgggacagatgccccctgga
ggaccccgccccaccgccttcagctccgcacagctccatcagttgcgagcacagatcatg
gcctacaagttactagctcgcaaccagatcatcccggacacactccggttagctgtggag
ggtaagaggccactgggaccatttcctagaccagcagatcctcaccagatgcagcagatg
aggatgcaacatcagcagcagcaacaacaacagcagcagcaacagcagtctcaacagtca
tctgacccatcacagcagccgccgcagatgcagatgaggacaatgtcaagtactgccccg
ccctcagcgataatgtctaatggagcccaggtcccagcatcaacacctgacagtggagct
ccaacacccagacccacccagcctagtcagccccctccaccttcagtgcaagctatgatg
gcccttcagcagaagcagaaccgtattgcaccggtggctaaaccacagggattggatcct
attgagatgctgaatgagagagaaaacagacttgctgctcggattggatctcggatccag
gaactcagcaagatgccggccaccatgcctgaagacatgagatgcaaggctatgatagag
ctccgggcgctcagacttctcaacttccaaagacagctgagaactgatgtagtgtcctgc
atgagacgagacaccactctagagacagccctcaacaccaaggcatacaagcgcagcaag
cgacagtcactcagagaagcacgtatcaccgagaagctggagaaacaacagaaggtggaa
caggagaggaagaagaggcagaaacatcaggaatatctgaacgcagtgctccagcatgcc
aaggacttcaaggagttccacaggaatgtaacagccaagatcagcaagctgaacaaagca
gtgatgacgtaccatgccaacactgagagggaacagaagaaggagcaggagagaatagag
aaagagcgtatgagacgtctcatggctgaagatgaagagggttaccgtaagctgattgat
caaaagaaagacaggcgcttggcctacctgctccaccagactgacgagtacattgacaat
ctcatgaaactggtccatgaacacaaggaagatatccgcaagaagaagaggcacaggaag
aagaagaagaagaggcccaaggttcccaaggaagggcagagtggcgatgcccttaaggaa
gggggggacgagagctctaacatgagcgagatccatgcaactgtgaaggagacggctact
gggaaggtgttgagtggggaggatgctcctactgctggacagcttgattcttggctagaa
ctgcaccctggagaaatgcgggaggcgggaggggaactgacccaggtccccccgtccaaa
gccaaaaagcctcgtaggcaaggcaaaaagtcacgcagccagtcgccttctcacgctcct
agtagcggttttgacatgtcgctaattacgcagatgttccagcagcacgcggactcggcg
aggtccctcgctcatgagtcggttgagggctcccgcaggagttcctcgcccactctgagc
gactctgaagccgatgagccacttccacagccttccatattgactgagaatagacctggt
actatagcgacaagcccagaaaatctagacgaggagactgccaacaagattatacaacaa
gcgtctactaaggatgaggatgatgagtacaagaatctagaaaactactatggcgttgct
cacactgtcagagaaaaggtgttcgaacaggcgtccatcttggtcaacggaaccctgaag
gagtaccaggtgaagggtctagaatggcttgtctccctatacaacaatcacctgaatggt
atccttgctgatgagatgggtctaggaaagaccattcagaccattggtctgattacatac
ctcatggagaaaaagagagtaaacgggccattccttatcattgtgccattgtcaacattg
tccaactggatcatagagtttgagaagtgggccccctctgttattaagatcccatacaag
ggttcaccactggttaggagaaacatcgccccacagttgaagggaggcaagtttaatgtg
ctcctgacaacatacgagtacatcatcaaagacaaggccattctgtccaagttacgctgg
cggtacatgatcatcgatgaaggtcatcgtatgaagaaccaccactgcaagctgacccag
gtcctcaacacccactacattgccccccacagactgctgctcaccggaaccccactccag
aacaaattgccagagttgtgggccctcctgaacttcctcttgccatccatcttcaagtcc
tgtgccacattcgagcagtggttcaatgctcctttcgccatgacgggagagaaggttgag
ttgaaccaggaagagaccctgctgattatccgacgtctccacaaggtgcttcgacccttc
ctcttgagacggctgaagaaggaggtggagtctcagctacctgagaaggttgagtatgtg
atcaagtgtgagatgtcggctctacagcgcttcctgtatcgacacatgcaacacaagggc
gtcctgctcactgatggatctgagaaggacaagaaaggcaagggaggagcgaagcttctg
atgaacaccatcatgcagcttaggaagatctgtaaccatcccttcatgtttcctcacatc
gaggaggccttcgcagaaacagcaggatcacagggaggaatcgtcactggccctgacctg
tacagatcctcaggaaagtttgagttgctggacagaatgttgccaaaactgaagatgcgt
aaccatcgagtcttgttgttctgtcagatgacgtctctgatgagtattatggaggactac
tttgtgtacagaggtttccggtacctgcgtcttgatggaacaaccaagtctgaggatcga
ggtcatctcctgcacctgttcaaccaaccggactccccctactttgtgtttctgctgagt
accagggctggaggtctcggtctgaacctgcaggctgccgacacagtcatcatcttcgac
tctgactggaaccctcatcaggacttacaagcccaggacagagctcatcgtatcggtcag
aaggcagaagtgcgtgtcctacgtctaatgtcagtcaacagtgtggaggagcgtatcctg
gctgctgcccgctacaagctgaacgtggacgagaaggtcatccaggctggcatgttcgac
cagaagtccactggcttcgagaggaaacagttccttcacgaaattctcatgaatgaacaa
aacggagaagaggaagaagatgaggttcctgatgatgaaaccatcaaccagatgttggcc
agaacagaggatgagttcgaggtctatcagaaaatggacattgagcgccgtcgtaatgaa
gccagagagggaggcaagaggaaaccacgactgatggaaattgatgaactgccatcttgg
attaccaaggatgaggaagaggttgacagactgacatgtgaggaggaggaagacaagctg
ttcggccgtggatctcgacaaaggaaggaggttgattactcggatcaacttacagagaag
cagtggcttcgggctattgaagacggcaaccttgatgaagtggaagacaagaagcgagtc
acaaagaaaggtcgtaagaggaagccggtagatgatgatatggaccagacgccaaaagtt
aagaagaggcgaggtcgacctccagtagagaaaatgaccccgaacccaccgaagctgaca
aagaggatgaagaagatacttgatgttgtgataaactacaaggacagtgatggccgagtg
ttgagcagtatgtttatgcagctgccgtcaaagaaagaactccctgaatactacgaaatt
atcaggaaagctgtagacttcagaaagataaagcaacgcattgtggaccacaagtaccgc
agtatagatgacctggagaatgatgtgatgttgctgtgtaaaaacgcccaagcttacaat
gtggagggatcagtgatctatgaagattccatcgtgctacagtcagtatttacaagtgct
agagagaggttggagaaggaaggcatggtgtcgtcagatgagagcgctggaagtgaagat
gaggaggatatggatgacaaggatgaacaagatgatgatgctgatgatgacgacagccag
catgtgaagaaacacaaattgtctaaagacagcaaaaagtttttacagactccaagcggc
aagcagcgagggcccaaacctaggaaggcaaaggcaaagcccatcatcagtgatgatgaa
tcagaagagagtgattctgatgatgatgaggtgatgccatcacgcagctcaacacggaca
tcatccccaagtccaggacatcggaaacgacgtgaatag
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integrated database retrieval system
