Haliotis rubra (blacklip abalone): 124291809
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Entry
124291809 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC124291809
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124291809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124291809
Enzymes [BR:
hrj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
124291809
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124291809
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124291809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
124291809
NCBI-ProteinID:
XP_046584839
LinkDB
All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MGKLTEGKSPVKRETVSASANLEVVSEEKFAKRLEGLSSSCINCQKERTKGQRRHPQKGK
RKQVKANTPIVIHLKDTLKAALQQRQRSLEEDSEASVKSGDSDLPHDQEDIITCVPKYSL
RDLHKDRPHNYKKHHHHNKSKKKDNKNLNALISVIEKAHHKDSRNLECNFAKDNPLLNSK
LSDMLNNATRSNEIDGAKRRSIVECENVELICNDLYNTEKHLESLEDTESDKSSVASSSE
NFSVSDSDSIQVDDTVPFEFTPEELEKLANYTTGFPLIRYDCPPSECPECLSAWYSYQYY
TFQDYSILPEKKSSSASERGARVEGAEADVVTVDIGAAGATAAVDSDKTLTEIDCDLGTD
EEIEIEGEHVTTSQYQKAHRQLWDIDISSQRRHKPDHSFPDSVYIDLTGTDVSLSVYYHH
NQSSQDANYANTHSSSSNGTTWYPQHVPGYYWPTSCYQMPLYSHHHLSSPYLHSNNSLPK
TAMVPPRDLKKFHASAPPPRQWIPIGHPDKNKPAAIFTVMCYNVLCDKYCTRQQYGYCPS
WALNWEYRKKGIMEEIRSCNADIISLQEVETDQFYSMFLPELKQDGYDGIFSPKSRARTM
TEQERKHVDGCAIFFRTSKFSLVKEQLIEFNQLAMANAEGHDDMLNRVMTKDNIGLAALL
ETKKDVFDHSGPYPPEHQVKQPILVATAHIHWDPEFSDVKLIQTMMLMSELRQVIEDAQH
QFRPGSSSSSIDCNNIPLILCGDLNSLPDSGVVEYLTSGKVAANHEDFKEIGYDSCLQKI
NTTIEKESFSHNFRLSRAYMDVMPYTNYTYDFKGIIDYIFYSKDHMNMLGMLGPLDEEWF
RQNKVIGCPHPHIPSDHFSLFVEYEMPVGTTQNGRSSNTNSNNANNNSSSSSNAPSTGKL
R
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggggaagctcacagaagggaagtctcctgtcaagagagaaactgtcagtgccagtgcc
aaccttgaagtggtgagtgaagaaaaatttgctaaaagacttgaaggtttaagttcgtca
tgtattaattgtcagaaagagcgcacaaagggtcagcgtcggcacccccagaaggggaaa
cgtaaacaagtgaaggctaatacccctatcgtcatccacctgaaagacacactcaaggca
gctctacagcagaggcagaggagtctggaggaggactctgaggcctcggtgaaatcaggg
gacagtgacctgccccacgaccaggaggatattattacctgtgtacctaaatactcactg
agggacttacataaagatagacctcacaactacaagaaacatcatcaccacaacaagtca
aagaagaaggataacaagaatctaaatgcactcatttctgtcattgaaaaagctcatcac
aaagactctaggaatttagaatgcaattttgccaaagacaatcctttgcttaattcaaaa
ctttctgatatgctcaacaatgcaactcgctcaaatgagatagatggtgctaaacgtcgc
agtattgttgaatgtgagaatgtggaacttatttgtaatgacttgtataacactgagaaa
catttggagagcctggaggacacagagagtgataaatcctcagtggcttcaagttctgag
aacttttctgtgtcagactcagatagtattcaggttgatgacactgttccctttgagttc
acccctgaggagttagaaaaactagccaactacaccaccggatttcccttgattcgttac
gactgccctccgtccgaatgtccggagtgtctgtcagcctggtacagctatcagtattac
acttttcaagattacagcattttacccgagaagaaatccagcagtgcatcagaaaggggt
gcacgtgtagagggtgctgaagccgatgttgttactgtggatataggagcagcaggggct
acagcggcagtagactctgacaaaacactcactgaaattgactgtgacttgggcacagat
gaagaaatagaaatcgaaggggaacatgtgaccacatctcaatatcagaaggcacatcgt
cagctgtgggacatagacatttcatcacaacgaagacacaagcccgaccactcttttcca
gacagtgtgtacattgacttgacaggcactgacgtgtctctttcagtgtattatcatcac
aatcagtcttctcaagatgcaaactatgcaaatactcacagtagcagcagtaacggcacc
acgtggtacccacaacacgtgcctggctactactggccgacgtcctgctaccagatgccc
ctgtacagtcatcatcacctatcatcaccgtacttacattccaacaactcacttccaaaa
actgccatggtgccaccaagagatcttaaaaaatttcatgccagtgccccccctccaaga
caatggatacccattggccaccctgacaagaacaagcctgcagctatcttcactgtgatg
tgttataatgtgttgtgtgacaagtactgtacccgccaacagtatggctactgcccgtcc
tgggccctcaactgggagtaccgaaagaaggggatcatggaagagatccgaagctgcaac
gcagacatcatcagcttacaggaggttgagactgaccagttctacagcatgttcctccca
gagctgaaacaagatggctacgatggtattttctcccccaagtctcgagcaagaacaatg
acagaacaagagaggaaacatgtggatggctgtgccatcttcttcagaacatcaaaattt
tctttggtgaaggagcagctgattgagttcaaccagctggcgatggccaatgccgagggc
catgatgacatgctcaacagagtcatgaccaaggacaatattggtttggcggcacttctg
gaaaccaagaaggatgtctttgatcatagtggaccctacccaccagagcatcaggtgaag
cagcccatcctggtggccacggcccacatacactgggaccctgagttcagtgacgtcaag
ctcatccagaccatgatgctcatgtccgagctccgccaggttattgaggatgcccaacat
caattccgcccgggttcatcgtcctcatccatcgactgcaacaacatccctcttattctc
tgtggtgatctcaactcactaccagactcaggtgttgtggagtacttgacctctgggaag
gtggcagctaaccatgaagactttaaggaaataggttacgattcctgccttcagaaaatc
aacacaaccattgagaaagagtccttcagtcacaacttccgactctctcgtgcctacatg
gatgtcatgccctatacaaattacacgtatgacttcaaaggcatcattgactacatcttc
tattcaaaagatcacatgaacatgcttggcatgctagggccgctcgatgaagaatggttt
cgtcagaacaaagttatcggatgtcctcatcctcacatcccatcagatcacttttcactg
ttcgtggagtacgagatgccagttggcaccacacaaaacggtcgcagcagcaacacaaac
agcaacaacgcaaacaacaacagcagtagtagcagcaacgcgccctcaactgggaagctg
agatag
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