Haliotis rubra (blacklip abalone): 124292010
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Entry
124292010 CDS
T07967
Name
(RefSeq) protein SMG9-like isoform X1
KO
K18735
protein SMG9
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124292010
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124292010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
YobI-ATPase
ABC_tran
AAA_29
nSTAND_NTPase5
AAA_21
NB-ARC
RsgA_GTPase
URGCP_GTPase
DO-GTPase2
AAA_14
ATPase_2
AAA_18
Motif
Other DBs
NCBI-GeneID:
124292010
NCBI-ProteinID:
XP_046585036
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MSDPLDRDRGGRRRRRRDRPGRKEREREPDQSPAPNKLPIILGLAKPAVEQQASGGGAGT
TAAMQTANLSQGGLVNKAQEKPIVVLRSRDENRPAPTTTATNQATTTNQGEATMGPAAYQ
IQRHSSVGHLAFENSSQNRLAPPPEMKHCVKVVDDSFRWCDAGIEMLLDQTDFLVVGVLG
PQGSGKSTILSLLAGTSPQDSYRSYVFQPQTKEVKENGAHQTNGIDMYVTPERIIFLDTQ
PVLSASILDQMIHQDKKYPTEYTSVENCIEMQSLQMATFLMTVCNVILVVQDWFTDASFL
RFLKNAEMLKPATPSGHEGSSHPEDAPDYFPHVVFVQNRANRDDYGLETYKMMTQTLSNT
FDMTKLKCTGTVNMVRGSVIPGLTSKTVKSDMNVFCIPQMEYYKLEPEPILTLLPEYRGF
PTFISLVRSLRNQIYSLPRHLLTHTTLSEKNWFHYAARMWDTVRKSQLLSEYNRLLP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccctttagatcgagacagaggaggaagacgccgcagaagacgagacagaccc
ggaagaaaagagcgagagcgtgaacccgaccagtctcctgctcccaacaaacttcccatc
atccttggccttgcgaaaccagcagttgaacagcaggcttcaggagggggcgcaggaacc
acagcagccatgcagacagccaatctctcccaaggaggtttagtcaacaaggcacaggag
aaacccattgttgtgcttcgatctcgagatgaaaacaggcctgcacctaccaccacagcc
accaaccaggcaaccaccaccaatcaaggggaggcaactatggggccagcagcgtatcag
attcagcgccattcctctgttggacatttagcctttgaaaacagctcccagaaccgcctg
gccccgccccctgagatgaagcactgtgtgaaggttgtggacgattcgttccgctggtgc
gatgcaggaattgagatgctgctggatcagacagacttccttgtagtgggagtccttggc
ccgcagggcagcggcaagtcgaccatcctctctctcttggcgggcacctcccctcaagac
tcatacaggagctatgtgttccagcctcagacaaaagaagtgaaggagaacggagcgcat
cagacaaatggcatcgacatgtatgtgacaccagagcggatcatcttcctggatacacag
ccagttctcagtgcttccatccttgaccagatgatacaccaggacaagaagtaccctaca
gagtacacctccgtggagaactgtatagagatgcagtccctgcagatggcaaccttcctg
atgaccgtgtgtaatgtgatcctggtggtccaggactggttcactgacgccagctttctt
aggttcctgaagaacgctgagatgctgaaaccagccactccgtctggacacgagggctcc
tcacatcctgaagatgctcctgactacttcccccatgttgtgtttgtacagaaccgagct
aaccgtgacgactatggcctggagacttacaagatgatgacacaaacactgagcaacacg
tttgacatgaccaagctcaagtgtacaggcactgtcaatatggtgcgaggcagcgtcatc
cccggacttacctccaagacagtcaagtccgatatgaatgtcttctgtatcccccagatg
gagtactacaagctagagccagaacctattctcaccctgctgccagaataccgaggcttc
cctacattcatatccctggttcgatcgctgcggaaccagatctactccctgccacgccac
ctcctcacacacactacattgtctgagaaaaactggtttcactatgcagcgaggatgtgg
gacactgtcagaaagtcccagctgctgtctgagtataacagactcctgccctga
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