Haliotis rubra (blacklip abalone): 124292055
Help
Entry
124292055 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-A4-like
KO
K16498
protocadherin delta 1
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124292055
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrj01009
]
124292055
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrj04515
]
124292055
Protein phosphatases and associated proteins [BR:
hrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124292055
Cell adhesion molecules [BR:
hrj04515
]
Cadherins
Protocadherins
124292055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
124292055
NCBI-ProteinID:
XP_046585084
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MLDVKETIPVSSQTAIMQRVGVITLLTFLCGHCLGQTPDLSLRIPEEINLDTYVGNVSDS
SAMFKNLSQAEKETLKFGILNKDSHPSKLFRIDPDSGKIYSQGRIDRETLCDFTDACRVE
FDVAVHSPVFSNIATVFVYVEDINDNAPTFPATEVTLDVSELASVGTVLKISGAVDRDSQ
FNNTIQRYELSQQENMFSLTTTKNLDGSSVINLLLGKSLDRELKDQYFFNIVASDGGSPP
KTGTLAVRINVIDENDNPPRFQNSSYDVMVKEDVAINATVMVVSATDPDLGTNSEVRYQF
SNLQSAKLQSLFSIDSTTGVIRVAGKLEYEPDTPYHLIVEALDRGDRSLMTQTVVTVTVL
DSGNNPPYVRINTLTTGNTVSEAAGVGFFVAYVEVEDSDTGENGDVVCNISSAAFSLEPL
SGRKGYKVLVNTILDRESRYSYNMSVMCQDRGNPPLFGSAVFQMYVTDVNDNTPQFQRRQ
YNVSIPENSPIGYSVLTVSAYDADRGDNSRLRYFVVEDTQKPSFRIQYDSGIITTNRRFD
REVTPVIKFHVLAIDQGMVARTGTTEVTLHISDINDEFPAFTHQLFQFRVVENMDANVIV
GNITATDLDAGLNGEIEYFIAESPDGMIPFKVFSNGTVIAEESLDRELKSRYIFTVLARD
KGXSPKTNSSEVSITVLDVNDNVPTILFPTTVNHTVFISRPPERDSVIGKIVAYDSDFGE
NSTLHFVISNGNDDGAFSIDRDTGETKVANIWKLQNDMVYDLTITVHDSGTPQLKAETHL
IIDVQFDNDTNTLTPVHTKSDKYVIIAAVVAAATIILSIIIIAAICFVLRTDRRKSPSLS
TNASKFNGHVASVKIPATDQTEVAQLSTGDTVDSGQIPPFGGVHNVQQKQVKHADQSFKK
KEVSFSIDDSLVSKPRDIIFNNARLTFMDEAEKILPLDDVHSDTSGETIPSDSGRGGSEE
EVNIQPDKKMNLRRWGAPHQESHSFDQYCPLATKQGPDFQNPRHNQVRFLHTNSFQEGRD
FSRNQGPRDTSRDYSLRQGHNTFQDRPNNYSRPLSYHRQSSNVSHDDDGSTTTSGSYTLN
QDDSLEERILGKDIIV
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacgtgaaggagacgatccctgtgtcatcacagaccgccatcatgcagagggtc
ggtgtcatcaccttgctgacattcctgtgtggacactgtcttggacaaacaccagacctg
agcttaagaataccggaagaaatcaaccttgatacttacgtagggaacgtgtcagatagt
agtgctatgttcaagaacctttcacaggcggagaaagaaactttaaagtttgggatttta
aacaaagacagtcatcccagtaaactgtttcgcatcgaccctgattctggaaaaatatac
agtcaaggtcgtatcgaccgtgaaactctatgcgacttcaccgacgcttgtcgcgttgag
tttgatgtcgctgttcactctcccgttttctccaatatcgccaccgtcttcgtctacgtg
gaggacatcaacgacaacgctccaacgttccccgcaacagaggtgacactagacgtttca
gaattagctagcgtcggtacagtgttaaaaataagcggtgccgtagacagagactcgcaa
tttaataacaccattcagagatatgagttgtcgcaacaagaaaacatgttttcactgacc
acgacaaagaacctcgatgggagctcggtgataaatcttctcctgggaaagtcgcttgac
cgcgagcttaaagatcagtactttttcaacatcgttgcatctgacggtggttcgcccccg
aaaacagggactctcgcggtaagaatcaacgttatcgacgaaaacgacaaccctccacga
tttcaaaactcgtcttacgacgtcatggtgaaggaagacgtcgccatcaacgcaacggtc
atggtagtgtcagcgactgatccggatttgggtaccaatagcgaagtgagataccagttc
agcaatctgcagtcagccaagttgcagtctctgttctctatagactcaacgacgggagta
attagagttgccggtaaacttgagtatgaaccagacacaccgtatcacttgatcgtggag
gctctggacagaggagaccgttccttgatgacacagactgttgtcactgtgacagtgctg
gactcggggaacaaccctccctatgtgaggatcaacaccctaacgacgggaaacactgtt
tcggaggctgcaggggtgggtttctttgtggcatatgtagaggtagaggactcagacact
ggtgagaacggggacgtcgtttgtaacatttccagcgctgcattttctcttgagcctctg
tctggcaggaagggatacaaagtactagtcaacactattctagatcgtgaatccaggtat
tcgtacaacatgagtgtcatgtgccaggatagagggaaccctccactgttcgggtctgcc
gtgttccagatgtatgttacagacgtcaatgacaacactccacagttccagcgaagacag
tacaacgtgtctatcccggaaaacagtccgattggatattccgtattgactgtgtcggcc
tatgacgctgaccgtggggacaattcccgtctgagatatttcgtcgtagaagatacacaa
aaaccatcattcagaatccaatatgattccggcatcattacaactaacaggagatttgac
agagaggtgacacctgtgataaagttccatgtcctcgccattgatcagggtatggtagcc
aggacaggcacgaccgaagtgacgctgcacatcagcgacatcaacgacgaattccccgcc
tttactcaccagttgtttcagttccgcgtggtagagaacatggacgctaacgttatcgta
ggaaatatcaccgctactgacctcgatgccggccttaatggtgaaattgagtacttcata
gcagagtctccagatggtatgataccttttaaagtattttctaatggaactgtgattgct
gaagagtccttggatagagaattaaagagcagatacatcttcacagtgttagcacgagac
aaaggcntctcccccaagacgaactcttcagaagtgtccattacagtgcttgatgtgaat
gacaacgtcccaacaattcttttccctacgactgtcaatcacacggtcttcatttcaagg
cccccagaaagagactccgtaattggcaagattgttgcatacgactccgactttggcgaa
aactccactctacattttgtgatatcaaacggcaacgacgatggtgctttctccatagac
agggacactggtgagactaaggttgcaaacatttggaagctgcagaacgacatggtatac
gatctgacaataactgtgcacgattcaggaactcctcaactgaaggctgaaactcacctg
attattgacgtgcagtttgacaacgacaccaatacactcacaccagtgcacactaaaagt
gacaagtatgtcatcatcgctgctgttgttgccgcggcaacaattatcctgtctatcatc
atcattgctgccatctgctttgtgctcaggactgacagacggaaatcaccatcattatca
acgaacgcttccaaattcaacggccatgttgcgtctgtaaaaatccccgcgacagatcaa
actgaggttgcgcagctatcgacaggggacacggtcgacagtgggcagatacccccgttc
ggtggagtccataacgttcaacagaaacaagtcaagcatgcagaccagtccttcaagaag
aaggaagttagcttcagcattgatgacagccttgtctccaaacccagagacatcatcttc
aacaacgccagattgacattcatggacgaagcggaaaaaatactcccactggatgacgtt
cacagcgacacctccggcgaaacaattcccagcgacagcggcagaggcggcagcgaggag
gaagtgaacatccagccagataagaaaatgaatctccgacggtggggcgcacctcatcag
gaaagtcattcgttcgaccagtactgccccttggcgacgaaacagggccccgacttccag
aatcccagacacaatcaagtcaggtttttacacacgaacagttttcaggaaggacgtgat
ttctcccgaaaccagggtcccagagacacgtcacgtgactattcattgcgtcaaggccac
aatactttccaggacagacccaacaactattcaaggccattatcataccacagacagtct
tccaatgtgtctcatgatgacgacggcagtaccactacgtccggaagttacacactaaac
caggacgattcactcgaggagagaattctcgggaaggatataatagtgtaa
DBGET
integrated database retrieval system
