KEGG   Haliotis rubra (blacklip abalone): 124292359
Entry
124292359         CDS       T07967                                 
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
hrj  Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hrj04121]
    124292359
   03400 DNA repair and recombination proteins [BR:hrj03400]
    124292359
Enzymes [BR:hrj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124292359
Ubiquitin system [BR:hrj04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124292359
DNA repair and recombination proteins [BR:hrj03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    124292359
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_3 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_2 DEAD zf-RING_5 zf-ANAPC11 Prok-RING_4 U-box
Other DBs
NCBI-GeneID: 124292359
NCBI-ProteinID: XP_046585410
LinkDB
Position
Unknown
AA seq 982 aa
MLNPPLDVPMMRIKADRVARVEADTLLLHENSKTVPIQLTLYGPTWYRDRCTRILNEATA
AFNVAEGQRVPIGVGNHVFNNEDIQAAVPHFAARPVAANHNTNVDSHRQRFTPVEVSNAV
DQLFGTLNEGDKSTEQEPTEAVRTPLYQHQKQALHWMIGRENKYQLPPFWEITDSGHYYN
RLLNHSTYEKPPSVRGGILADDMGLGKTLEIIALVLTNFVDNRPLAVPLPDTQRDRREKL
LNKMDQKHLTKTTQCLPKLRFGKPDSANVEIVSVLSDADQRREHSESVGRMKDVGASGRN
LRGTTPKGMRKEKYKFPYDDDDDDDDDDDDDDDDDDDDDDDDELPDLYDETLYNEGFAEE
DPDVMIVGVSSNADKGRGRCESFERMDAEDVDTPEDPDVIIVGVSSNVDTRRGCCESVER
MEDDMDASDFMTANHCDEMGRSLSENDQPRGTLIICPLCVLSTWQDQFVEHIHPNVHIDV
YRYHGSQRCKELSFIERKDVVITTYGVVRSEFKNYLNQKEAPLFRINWLRIVLDEGHKIR
NPKAQQTKAAIALRAQRKWVLSGTPIQNRMLDLWPLISFLNVTPLNKSNWWYCLLEEPLQ
RGLNIALRRVQHLMGNIAMRRTKNTLVDGEPLVKLPKREVYIERIKMSDEESRKYKSMDE
IGKIKIKDYFQLKKYFMVLVIILRLRQMCCHSYLLPRNSDWIPSEESDSEEEDFEKKRET
LVNRLKVISESEEECSVCVDVLKTPVILPCAHYFCHKCILKYIKHMEHVEKSYATCPMCR
VPTAADQIIQLPEQPEPQHYGDWKSSTKVDALITALVKLRSEDPSVKSIVASQFTSFLTL
IEKPLKEHNFKAVRLDGTMSISQRQEAIKKFSDPQPESPTIFLISICAGGVGLNLTAASR
VFLMDPQWNPAVEEQCFDRCHRLGQTRDVIITKFICEDTIEERMLHLQERKKLMMQQAFK
QTATQRREQRARDITTVMNITS
NT seq 2949 nt   +upstreamnt  +downstreamnt
atgctcaatccacctcttgatgtccccatgatgagaatcaaagctgatcgtgtagcaaga
gtcgaagcagacacacttctcctccatgaaaacagtaaaaccgtgcctatccagcttaca
ttgtacggacctacttggtacagagacaggtgcacaagaatcttaaatgaagccacggca
gccttcaacgtggccgagggacagagagtaccaataggtgtgggcaaccatgtcttcaat
aacgaggatatacaagctgctgttccacactttgcagcaagacctgttgcggccaaccac
aacacaaacgttgacagtcatcggcagaggttcacgccagttgaggttagcaatgctgta
gaccagctgtttggaacacttaacgaaggggacaaaagtacagaacaagaaccgacagag
gctgtgaggacgcccctgtaccagcaccagaagcaagcccttcactggatgataggccgg
gaaaacaaatatcaactgccaccattctgggagataacagacagtggccattattacaac
agactactgaatcatagtacttatgaaaagccaccaagtgttcgaggcggtattctggcc
gatgatatgggcctgggaaagacactggagatcattgctctggtactgacaaactttgtg
gacaatcgaccactggctgttcctttgcctgacacacaacgagacagaagagaaaagctc
ctcaacaagatggatcagaagcacctgacaaagacgacacagtgtcttccaaagttacgt
tttgggaagcctgacagtgccaatgttgagattgttagcgttttatcagatgcagaccaa
cgtcgggaacacagtgagagtgttggtagaatgaaggatgttggtgcatcgggtaggaac
ctacggggtacgaccccaaagggcatgcgtaaagaaaaatacaaatttccatatgacgac
gacgacgacgacgacgacgatgatgatgatgatgatgatgatgatgatgatgatgatgat
gatgatgaactgcctgatctttatgacgagacattgtataatgaaggatttgccgaggaa
gaccctgacgtaatgattgttggcgtctcatcgaatgcagacaaaggtcggggacgctgt
gagagttttgagagaatggatgccgaggatgtggatacaccagaagaccctgacgtaatt
attgttggcgtctcatcgaatgtagacacacgacggggatgctgtgagagtgttgagaga
atggaggacgatatggatgcatcagatttcatgacagccaatcattgtgatgaaatgggg
aggagtctcagtgaaaatgatcagccacgtggtacattgatcatttgtcctctgtgtgtc
ctcagtacctggcaggatcagtttgtggagcatattcatcctaacgtccacattgacgtc
tatcgttaccatggcagtcagcgttgtaaagaactcagttttattgagaggaaggatgtc
gtaattacaacatatggagttgtgcggagtgaattcaagaactacctgaatcagaaggaa
gccccactgtttaggataaactggcttcgcattgtgttggatgaaggacacaaaataaga
aacccaaaggctcagcaaacgaaagcggcgattgccctcagagcacaacgcaagtgggtt
ctctcaggtacacccatccagaacaggatgctggatctgtggccgctcatcagtttcctt
aacgtgacacctctcaataaaagtaactggtggtactgcctgttggaggaacccttgcaa
cgtggtctgaatattgccttgagacgtgtccaacacctgatgggtaacatcgctatgcga
aggacaaagaacaccctcgtagatggagagccccttgtgaagctgcccaagagagaagtg
tacattgagcgaatcaagatgtcagacgaggagagcaggaagtacaagtcaatggatgag
attgggaagatcaagataaaagactattttcaattgaagaaatactttatggtgttggtg
atcatcctccgactgcgacagatgtgttgtcatagctacctactgccccgcaattctgat
tggataccaagcgaagaatcggattccgaagaggaagacttcgaaaagaagcgtgagact
ctggttaacaggctgaaggtcatcagcgagtcagaggaagagtgctctgtgtgtgtcgac
gtcctgaagactcctgtgatactaccatgtgcacattacttctgtcacaaatgcatcctc
aaatacatcaaacacatggaacatgtagagaagagttatgccacatgtcctatgtgtcgt
gtgcctacagctgcagatcagataatccaacttccggaacagccggaacctcaacactat
ggtgactggaagtcgagtacaaaggtggacgccctgatcacagccctggtgaagctgaga
agtgaagacccatctgtaaagagtattgtggcttcgcagttcacctcttttctgacgctc
atagaaaagccactaaaggaacacaacttcaaggctgtgagactagacggcacgatgtca
atttctcagcgccaggaagctatcaaaaagttctcggatcctcagcctgaatctcccacc
atcttcctcatctccatatgtgcgggaggcgtgggcctcaacctgactgcagcatccagg
gtgttcctcatggacccgcaatggaacccggcagtggaagaacagtgtttcgacagatgc
caccgcctgggccaaaccagagatgtcatcatcacaaagttcatttgtgaggacactatc
gaggagagaatgttgcacctccaggagaggaagaagctgatgatgcagcaggcgtttaag
cagacggcaacacagagaagggaacagcgggcacgtgacataacaactgtcatgaacatt
acatcatag

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