Haliotis rubra (blacklip abalone): 124292496
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Entry
124292496 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: guanine nucleotide exchange factor subunit RIC1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrj04131
]
124292496
Membrane trafficking [BR:
hrj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
124292496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
124292496
NCBI-ProteinID:
XP_046585565
LinkDB
All DBs
Position
Unknown
AA seq
1425 aa
AA seq
DB search
MYFPIGWPKYLRNSHNDSSPIDFIVSSCDRMFFAVLSDDTLTIWYSKPSIQIVSHSLSQK
QLEEYGGYCQAEWKQDSSMLAVITTKCYVLFFKVEIDISVSNHNCLYVQQEGRSIPTPRH
NINGILDSDSVPALKVSWVSQIQLSDNISCCLCVRDELVVSTADGYLNRVRWSGNKNDKA
TLHLRDIPVSTDLQQFRASKLTDSDGYVVHMEYSPTLGGYSMVLSSGKAIFVIPPSSRSE
KTSAHGVWXEDLSNATSLAVNHRYRLIAFGCKSGEGIVYMIDEVVGALEISHKLVISSRD
YPDAATIAGSVQCMKWTPDGTAIALTWKNGGFSLWSVFGALLVCTLGGDYSSPLDGIHLY
PSSVKSMEWGLEGYHLWMISNQCEGGVSQEKEGEGLENGEGIYQQCHKSVLLQFQFLKSA
LSVNPCMANHEHVFLQGEDKLYMSTGDTISRTSSHHHHHHHHHHNPQHIRNNTSCLLGNV
FIGNKQWQVIPISHSYLASNWPIRYSAVDRVAGQCVAVSGKTGFAHYALFNRKWKLFGNE
TQERDMVVSGGITWWKDFICLACYNIPGQRDEIRFYPSGTKLDNTFAQITKVPAQVLLLN
TFRDILIIFCADSHVMLFSLERKNTQSNPAVTISKIQEVPLNQFIPHPLCVAGLTLTSLT
SESGTQIKHTSKEAESMLLNVSGKLLMFQRDRRGPQIKDEDHKYRSVPFCPPSVVATSVE
NLWTTSRANLGKMQLLEAMWLGCGSHGMKVWLPLFXKNEGKAHNFMSKRIMLPFKVDIYP
LAVLFEDAVILGAACDAVVYDVSSPGQDKSALPLTLLERTSQIYLHHILRQLLRRNLGVH
ALNLARCCTELPYFPHVLELLLHEVLEAEATSKDPIPDPLLPRVVAFIQEFPEYLQTVVH
CARKTEVALWPYLFSTVGNPKDLFEECLINDTLETAATYLIILQNLEKPMVSRQHATLLL
DASLDAGKWELCRDLVRFLKAIDPNEAEMSPPIGMFSRVGSGSSYPAASLSPPISPTDAG
GFNFSNVSNVGRVRTSSMVADPVRDLPKPKDKLKHTASDPLVRKGSVSSKTKMNEPTAEQ
VYIDMILCRHARKLLSSNQIRTLGYFASNMDDFQLVSWLRRERVRAAKLDDFVTALRDIH
QQFDWPLPILSYHQLKKSMAYSSSSLGSSVLEEDTASPLTDSDKPMTDSQEPVLLTPFCA
VRSPPTESFMSQSTSDDVFLRPQHSKTEDSSVATLEVSDSSSLLGEYEVVNDTLNSDNVT
PDIEHMSQEIANKGPVQSEVELRYLLQIMLEAGCLEWALIMATVLRDTLGVTRTVNTASL
TDTPLDMAARMREGLSYLELWADTECMGYKAFFHSIKSQIHVLEKVVEQSQSLLDVSIPQ
CDSPTLDEANASPEAQSMRSDSQEVVSDTEEIVAKDDKSNDCSIS
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcccaattggatggccaaaatatcttaggaattcacataatgattcctctcca
atcgatttcattgtcagtagttgtgatcggatgttttttgccgttctctcggatgatact
ctgacaatttggtattcaaagccctcaatacagatagtaagtcacagtctgtcacagaag
cagctggaagaatatggaggatattgtcaggcagaatggaagcaggactcttccatgctg
gctgtcattaccacaaagtgctatgttttgttcttcaaagtggaaattgacatctcagtg
tccaaccacaactgtttgtatgtacagcaagaaggaagaagtattccaacaccacgtcac
aacatcaacggcatcctagacagcgacagtgttcctgccctgaaagtgtcctgggtgtca
cagatacagctatcagataacatctcctgctgtctatgtgtccgagatgagctggtggtg
agcacggcagatggctatctaaaccgggtacgctggagcggcaacaagaatgacaaagct
acattgcatctgcgtgatatcccagtctccacggacctgcagcagtttagagcctccaag
ctgacagacagtgatggctacgtggttcacatggagtacagccccactctgggaggatac
agcatggtgctgtctagtggcaaggccatctttgtcattcctccttcatcaagatcagag
aaaactagtgctcatggtgtttggngcgaagatctgtcaaatgctacctctctggccgtc
aaccacagatacaggcttatagcatttggatgtaaaagtggtgaggggattgtgtacatg
atagatgaagttgttggagcgctggaaatctcacataaactagtcatctctagcagggac
tacccagatgctgccaccattgctggctctgtgcagtgcatgaagtggacaccagatggc
actgccattgctctcacctggaagaacggtggcttctccttgtggagtgtgtttggggca
ttgctagtctgtacactaggtggtgattacagctcccctttggatggcattcacctgtac
ccttcctctgtcaagtctatggagtggggtctagagggctaccatctgtggatgatttct
aaccaatgcgaaggaggcgtgtcccaggagaaggaaggggagggcctggagaatggggag
gggatctaccaacagtgtcacaagtcagttctgttgcagttccagttcctcaagagtgcc
ctatcagtcaacccatgcatggccaaccatgaacatgtatttctccaaggggaggataag
ctatacatgagtactggagacaccatctcccggacgtctagtcaccatcaccatcatcac
caccaccatcataaccctcagcacatacgcaacaacacctcatgtcttctaggcaatgtg
ttcatcggcaacaagcagtggcaggtcatccctatatcacacagctatctggccagcaac
tggccaatcaggtattcagcagtggaccgggttgctgggcagtgtgtggcagtgtcaggg
aagacaggcttcgctcactacgcgctcttcaacagaaagtggaagttgtttgggaatgaa
acacaagagcgggacatggttgtgtcaggtggcatcacctggtggaaggacttcatctgc
ttggcctgctacaacatcccaggtcagagggacgagatccgattctatcccagtggcact
aagctggacaatacgtttgctcagataaccaaggtgcctgctcaggtcctcctcctcaac
acattcagggacatcctcatcatcttctgtgctgatagccacgtcatgctctttagtctg
gagaggaaaaatactcagtcaaatccagcagtgactatcagcaaaattcaggaggtgccc
ctcaaccagtttatcccccaccccctgtgtgtagctggcctcacactcacctccctcaca
tctgagtcaggaacacagataaagcatacttccaaagaagctgagagtatgttgttgaat
gtatctggtaaactgttgatgtttcaacgagaccgcagaggtccacagatcaaagatgaa
gatcataaatatagatcggtgccgttctgtccgccgtctgtcgtagctacctctgtagaa
aatctctggacaacctccagggccaacctgggcaagatgcaattactggaagccatgtgg
ctgggctgtggctcacacgggatgaaggtgtggttacctttgtttncgaagaatgaggga
aaagctcacaacttcatgtcaaaacgaataatgctgccattcaaagtggacatttaccct
ctagctgtgctatttgaggatgctgttattttgggcgctgcatgtgatgctgtggtgtac
gacgtctcttctcccggccaggacaagtcagctcttcctctgacactactcgagagaact
agtcagatttatctccatcatatactgaggcagctgctgaggagaaacctgggcgtgcat
gctctgaacctggcccggtgctgtacggagctgccctacttcccccatgtactggagctg
ctgctacacgaggtgctggaggccgaggccacgtctaaagaccccattccagaccctttg
ttgccgcgagtggtagcatttatccaggaattcccggagtacctccaaaccgtggtccac
tgtgccaggaagacggaggttgctctttggccctacctcttctccacagttggcaaccca
aaagatctgtttgaggagtgtctgatcaatgacaccctggagacagcagcaacctacctc
atcatccttcaaaacctggagaaacccatggtcagcagacagcatgctaccctcctgctg
gacgcatcgctggacgccggcaagtgggaactatgtcgggacttggtcaggttcctcaaa
gccatagatccgaatgaggctgagatgtctccaccgatcggaatgttcagtcgagtgggg
tcggggtcgtcataccctgcagcatctctcagtccgccgatctcaccaacggacgcagga
gggttcaacttcagcaatgtcagcaatgtgggccgagtgcggacatcaagcatggtggct
gacccagtccgagatctaccaaaacctaaagacaaactcaaacacactgcctcagaccct
ttggttagaaaagggtcggtgtccagcaagaccaagatgaatgagcccacagcagagcag
gtgtacatagacatgatcctgtgtcgacatgctcgtaaactgctcagctccaaccagatc
cgcacactgggctacttcgcttccaacatggatgacttccagcttgtctcctggctccgt
agggagagggttcgtgcagccaagctggatgactttgtaacagccctccgtgacatccac
caacagtttgactggcctctgccaatcttgtcctaccatcaactgaagaagagcatggca
tattcgtcatctagtcttgggtcatcagtgctagaggaggacacagctagtccgctgact
gacagtgacaagcccatgacagacagccaggagccggtgctgttgacaccattctgcgct
gtccgctcacctcccactgaatccttcatgtcccagtcaacgtcggacgatgtgtttctc
agaccacagcattccaagactgaagacagtagtgttgccacgctggaggtgtctgacagc
agttccctactgggggagtatgaggtggtcaacgacacactcaacagtgacaatgtcacg
cccgacattgagcacatgtcacaagagattgcaaacaaggggcctgtacagtccgaggtg
gaactaaggtacctcctccagatcatgctagaagctggctgtctggagtgggctctgatc
atggccacggtgttgcgagacacgctgggggtgacaaggacggtgaacacagccagtctg
acagacacgcccctggacatggcagccaggatgagggaggggttgtcctacctggagctt
tgggcagacacagagtgtatggggtacaaggcgttcttccattctatcaagagtcagatt
cacgtgttggagaaggtcgtagagcagtcccagtcgttgctggacgtcagcatcccgcaa
tgtgactccccgacgcttgatgaagcaaatgcatcaccagaggctcaatcaatgcgttca
gacagtcaggaggtcgtgtctgatactgaggaaattgtggcaaaagatgacaagtccaac
gattgttctataagttaa
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