Haliotis rubra (blacklip abalone): 124292500
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Entry
124292500 CDS
T07967
Name
(RefSeq) ATP-dependent RNA helicase DDX4-like isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrj03036
]
124292500
Enzymes [BR:
hrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124292500
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124292500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
zf-CCHC
Helicase_C
zf-CCHC_3
ResIII
Cas3-like_C_2
HEM4
CMS1
Motif
Other DBs
NCBI-GeneID:
124292500
NCBI-ProteinID:
XP_046585569
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
MADDWDGGNTTAPSQGFGAGRGFGRGGFGVSNGTDATKKVFGFRGRGGLAKETDNSSGDS
SSRPGGFTSRNGDSQNGFGSRGGFGSRGGFGGSRATSDNDGGWGDSGSSDSKPSRGGFGG
GRGGFGSRPQVNGQSNDDNSWGDSKPSRGGFGSRGGSRGGGFGSRGGFGSSDNDDAPRGG
GFGGRGGSSSGSGCFKCGEEGHMSRECPNAGSSGGRGGSRACFKCGEEGHMSRECPSGGG
GGGSRACFKCGEEGHMSRECPSGGGGGGGGSRACFKCGEEGHMSRECPSGGGGGGGGGKK
GCFKCGEDGHMARECPNADSSGKDDRPPPYIPPALTENEDEIFQSIEKGINFDKYDNITV
EVSGRDPVGFISGFDEAGLYPTFLKNVRKAKYEKPTPVQKYSIPIIAAGRDLMACAQTGS
GKTAAFLLPTLTCMVKEGLTTSQFSEVQEPQAIIVAPTRELVVQIHSDARKFSWGTEVRP
VVVYGGTSVGHQLREVERGAHIVVGTPGRLLDFIEKGKIGLGKVKFLILDEADRMLDMGF
EPCIRKLVEQLGMPPKTQRQTLMFSATFPTEIQKLAADFLNDYLFLTVGRVGGANTDVEQ
NFFEVDRLQKREKLCSILTESGSDKTLVFVEQKRNADFLASYLSQSGFPTTSIHGDRLQR
EREEALRDFKKGTAPILIATSVAARGLDIPEVKHVVNYDLPSSIDEYVHRIGRTGRCGNL
GKATSFYSHDSDSALVKSLVRILTEAHQIVPEWLSDYSLTSDGVIDSAVHGLSSQYGGKD
IRRGKFNSGGGGGGGKSGNAWENSWSGGGGGGSSAAAADADEEEWD
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattgggacggtggaaatacgaccgcaccctcccaaggcttcggagctggg
aggggctttggaagaggcggttttggagtgtcgaatggaacagatgcaacgaagaaagtg
tttggattccgtggccgaggaggcttagctaaagaaactgataacagttctggtgacagc
tcgagtagacctggtggattcacatctaggaatggagacagtcagaatgggtttggttct
agagggggtttcggaagccgagggggtttcggaggttctagggccacatcagataatgat
ggaggatggggggattcggggagctcggactcgaaaccaagtcgcggtggttttggtggt
ggtcgaggtggctttggaagcaggccacaggtaaatggacagagtaatgatgacaacagt
tggggagattcgaagccaagtagaggaggatttggcagtagaggaggatcaagaggtgga
ggatttggaagcaggggaggtttcgggtcaagtgataatgacgacgctccaaggggcgga
ggttttggtggccgtgggggcagtagcagcggcagcgggtgttttaagtgtggggaggag
gggcacatgtcccgagaatgtcctaatgctggcagctctggagggagaggtggaagccgt
gcctgtttcaagtgtggcgaggaaggccacatgtccagagagtgtcccagtggaggaggt
ggcggtggaagccgtgcctgttttaagtgtggtgaggaaggccacatgtccagagagtgt
cccagtggaggtggaggaggtggaggtggaagccgtgcctgtttcaagtgtggtgaggaa
ggccacatgtccagagagtgtcccagtggaggaggaggtggtggcggtggtggtaagaag
ggctgttttaagtgcggagaggatggtcacatggcaagagaatgtcctaatgcagacagc
tctggcaaagacgatcgtccacctccatacattcctcctgcactgacagagaatgaagat
gagatcttccagtccatagagaagggcattaactttgacaaatacgacaatatcactgtg
gaagtgagtgggagagaccctgttggtttcatcagcggttttgatgaagctggtctgtat
cccacgtttttgaagaatgttcgaaaggcgaagtatgagaaaccaacccctgttcagaag
tattctattcctattattgcagctggtcgtgacctgatggcctgtgcccagacaggatca
ggcaaaacggctgcattcttgttgccaacattaacctgtatggtcaaggagggattgacc
actagtcagttctcagaggtacaagagcctcaagccatcattgtggcccccaccagggag
ctggtggtacagatccactctgatgctcgcaagttctcttgggggacggaggttcgcccc
gtggtagtgtatgggggaacgtctgttgggcatcagctgagggaggtggagagaggggca
cacattgtggtggggactcccgggagactgctggatttcatcgagaagggcaagattggt
ctgggtaaggtgaagttcctcattctggacgaggcagaccgaatgttggacatgggcttt
gagccgtgtatacgcaagttagtagagcagctgggaatgccccctaagacccagagacag
acactaatgttcagtgctacatttcccacggagatacagaaactagcagctgattttctg
aatgattacttgttcctgacagtgggacgtgtgggtggggccaacacagatgtagaacaa
aacttctttgaggttgacagactacagaaaagggagaaactttgttccatcctcacagaa
tctggttcagacaagaccctggtgtttgtggaacagaagaggaatgcagatttcttagct
agttatctgagtcagtctggcttccccaccacaagtatccatggtgatcgtctgcagagg
gagagagaggaagccttgagggatttcaagaaaggaaccgcacctattctgattgccaca
tctgtggctgctagagggttggatattccagaagtgaagcatgtagtcaactatgacctg
ccctcatccattgatgaatatgttcatcgtattggcaggacaggtcgctgtggcaacttg
gggaaagcaacaagtttctactcccatgactctgacagtgccttagtgaagagtttggtt
cgaattctaacagaagctcaccagatagtgcctgagtggttgtcagactactccctgacc
agtgatggagtgattgacagtgctgtccacggcttgtcaagtcagtatggtggaaaggat
atcagaagggggaagttcaattctggaggtggaggtggtggcggaaaatcaggcaatgcc
tgggagaacagctggagtggtggcgggggcggtggatcttctgctgctgctgcagatgct
gacgaggaagagtgggactaa
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