Halobaculum rubrum: K6T25_00530
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Entry
K6T25_00530 CDS
T07963
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hrm
Halobaculum rubrum
Pathway
hrm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T25_00530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrm03021
]
K6T25_00530
Transcription machinery [BR:
hrm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
K6T25_00530
Prokaryotic type
Archaeal type
TFB
K6T25_00530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Trm112p
HTH_Tnp_ISL3
Sigma70_r4
Anti-TRAP
Zn_ribbon_LysW
Zn_ribbon_PaaD
DZR_2
Zn_ribbon_tTFIIB
Cyclin_N
HypA
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QZX99629
LinkDB
All DBs
Position
complement(92916..93905)
Genome browser
AA seq
329 aa
AA seq
DB search
MSENVRGYTDDRSRTTTADEDETESESAGEQLECPECSGKLTNDSERGETVCRDCGLVVE
EDEIDHGPEWRAFDSKEKDQKSRVGAPTTNMMHDKGLSTNIGWQNKDAYGNQLSGRQREK
MQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALDEDLLPG
RSIEGVATASLYAAARQAGTPRSLDEITNVSRVEKDEIARTYRYVVRELKLEIQPADPES
YVPRFASDLELSDESERRARQLLQSAKQEGVHSGKSPVGLAAAAVYAASLLTNEKVTQSE
VSRVANISEVTIRNRYHELLEAEEEVQLG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaacgtccgaggttacacggacgaccgatcgcgcaccaccaccgccgacgag
gacgagacggagtccgaatcggcgggagaacagctcgaatgcccggagtgtagcgggaag
ctgacgaacgactccgagcgcggcgagacggtctgtcgggactgcggcctcgtcgtcgag
gaagacgagatcgatcacgggccggagtggcgcgcgttcgactccaaggagaaagaccag
aagtcccgcgtcggcgcccccacgacgaacatgatgcacgacaaggggctgtcgacgaac
atcggctggcagaacaaggacgcctacggcaaccagctgtcgggccgccagcgcgagaag
atgcagcggctgcgcacgtggaacgagcggttccgcacgcgcgactccaaagagcgaaat
ctcaagcaggcgctgggcgagatcgaccgcatggcctccgcgctcggcctcccggacaac
gtccgcgagaccgcctcggtcatctatcgacgcgcgctcgacgaggacctgcttccgggc
cgctccatcgagggcgtcgccaccgcgagcctctatgcggcggctcgacaggccggaacg
cctcggagcctcgacgagataacgaacgtctcacgcgtcgagaaagacgagatcgcacgg
acgtaccgctacgtcgtccgcgagctgaagctggagatccagccggccgaccccgagagc
tacgtcccgcggttcgcgtcggacctggagctgtcggacgagtccgagcgacgcgctcgc
cagctcctccagagcgccaaacaggagggcgtccactccggcaagtcgccggtcggtctc
gcggccgcggccgtctacgccgcgtcgctgctcaccaacgagaaggtgacgcaaagcgag
gtgagcagggtggcgaacatctcggaggtcaccatccgcaaccggtatcacgagctgctc
gaagccgaggaagaggtacagctcggctga
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