Halobaculum rubrum: K6T25_00890
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Entry
K6T25_00890 CDS
T07963
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hrm
Halobaculum rubrum
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrm03036
]
K6T25_00890 (smc)
Chromosome and associated proteins [BR:
hrm03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
K6T25_00890 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
Crescentin
AAA_13
AAA_21
ATG16
GAS
DUF1664
Exonuc_VII_L
EzrA
AAA_29
AAA_15
DUF4407
DUF4200
Fez1
Fib_alpha
Filament
TolA_bind_tri
DUF4201
ATG17_like
ABC_tran_CTD
MscS_porin
Tropomyosin
DUF724
DUF4795
APG6_N
TPR_MLP1_2
DUF5082
FliJ
Spectrin
HMMR_N
TMPIT
FlaC_arch
MIEAP
COG6_N
Laminin_II
CENP-F_leu_zip
FPP
Motif
Other DBs
NCBI-ProteinID:
QZX99699
LinkDB
All DBs
Position
complement(161960..165547)
Genome browser
AA seq
1195 aa
AA seq
DB search
MHITELVLDNFKSFGRPTRIPFYEDFTVITGPNGSGKSNIIDGVLFALGLARTRGIRAEK
LTDLIYNPGYEEGEGPAGDREASVEVVLDNSEGTLDRSQVVSAAGSDDVGDTDQITIKRR
VKETDDNYYSYYYLNGRSVNLSDIQDLLAQAGVTPEGYNVVMQGDVTDIINMTPHERRGI
IDEIAGVAEFDAKKEDAFEELETVEERIDEADLRIGEKEDRLDQLADERETALQYQDLRD
EKEEYEGYLTAAELEDKREDLAGTRESMASREGELEDLRAELDDRQARVDDLEEDLDEIN
REIERKGEDEQIAIKAEIEEIKGDVSRLEGKIENQRERVEEAETERRDAFVAIDKKSEEI
DEFDAEIRETKVETANLKSTLKSKQTELADVQAEIDSVDTEFDELKAELADRKESLEELR
AEKNELQREKDRLLDDARRRSNEIGDVEDELQETREAIPRLNERVSNLHSELDKAEKNKA
NIDGVIEDLRAEKAEYQEELDGVEEEIREKQQQYSKLEARAGDSGDTSWPRAVTTVTNAD
FGGVHGPVGELASVPGEYATACETAAGGRLANVVVDDDGVGSDCIDYLKQRNAGRATFLP
ITEMDERGLPSLPNDPGVVDFARNLVDYDPEYEGIFSYVLGSTLVVEDMDTARHLMGNYR
MVTLDGDLVEKSGAMTGGSGGGSRYSFSKSGKGKLERVAEEIHELEDERQRIKAEIADID
DDLDDARSRAADAAEKVRDIESDIERAEETLEEKEGRIGELEERLEELREERESVDAKMT
GLDEEIDAADEEIETIEADIEELESELADSKIPELSARADEIRAEIDDLEDRMDDLDGEL
NQLQLEKQYAEDAVDDLHDTVEEAQSKKADAEERIDEFEERIVEKEATLEQKRDAIAELE
DELADLKEEREAVKESFREAKSARDEQESKVERVVSKLESLRETAERLEWEIDSLEEQVG
SYDPEAIPDHDTVESEIDRLQAEMEELEPVNMLAIDEYDDVQADLDDLQERRDVLVEERE
AIAERIDQFESQKRATFMDAFEAIDEQFTEIFQRLSAGTGELVLEDPEDPFEGGLTMKAQ
PADKPVQRLDAMSGGEKSLTALAFIFAIQRHNPAPFYALDEVDAFLDAVNAERVGEMVHD
LAGEAQFVVVSHRSALLERSERAIGVTMQSDNVSAVTGIQLGDNGEPVPEVQADD
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcacggaactcgtactggacaacttcaagagcttcgggcgaccgacgcggatc
cccttctacgaggacttcacagtcatcaccggaccgaacggctcgggaaagtcgaacatc
atcgacggggtgttgttcgcgctcggactcgcgcgcacgcgcggtatccgcgcggagaaa
ctcaccgatctcatctacaaccccggctacgaggagggcgaggggcccgccggcgaccga
gaggcgagcgtcgaggtcgtcctcgacaactccgaggggacgctcgaccgctcacaggtc
gtcagcgccgccggcagcgacgacgtcggcgacaccgaccagataacgatcaagcgtcgg
gtgaaggagaccgacgacaactactactcgtactactacctcaacggccgctcggtcaac
ctctcggacatccaggacctgctcgcgcaggccggcgtcaccccggaggggtacaacgtt
gtcatgcagggcgacgtgaccgacatcatcaacatgaccccccacgagcgtcgggggatc
atcgacgagatcgcgggcgtcgccgagttcgacgctaagaaggaggacgccttcgaggaa
ctggagacggtcgaggagcgcatcgacgaggccgacctccgaatcggggagaaggaggac
cggctcgaccagttggccgacgagcgcgagacggccctccagtatcaggaccttcgcgac
gagaaggaggagtacgagggctacctgacggccgccgagctggaggacaaacgcgaggac
ctcgccggcacccgcgagtcgatggcgtcccgggagggggaactcgaggacctccgcgcg
gaactcgacgaccgacaggctcgcgtcgacgacctcgaggaggacctcgacgagatcaac
cgcgagatcgagcgcaagggcgaggacgagcagatcgcgatcaaagccgagatcgaggag
atcaagggcgacgtctcccgactcgaggggaagatcgagaaccagcgcgagcgcgtcgag
gaggccgagaccgagcgccgcgacgcgttcgtcgccatcgacaagaagagcgaggagatc
gacgagttcgacgcggagatccgcgagacgaaagtcgagacggcgaacctgaagtcgacg
ctcaaatcgaagcagaccgagctggcggacgttcaggccgagatcgacagcgtcgacacc
gagttcgacgagctgaaggccgagctggccgaccggaaggagtcgctggaggagctgcgc
gccgagaagaacgagctccagcgcgagaaggaccgcctgctcgacgacgcgcgccggcgc
tcgaacgagatcggcgacgtcgaggacgagctgcaggagacgcgggaggcgatcccgcgg
ttgaacgagcgcgtctcgaacctccactccgaactcgacaaggccgagaagaacaaggcc
aacatcgacggcgtcatcgaggacctccgcgccgagaaggccgagtatcaggaggaactc
gacggggtcgaggaggagatccgcgagaagcaacagcagtactccaagctggaggcccgc
gccggcgactccggcgacacctcgtggccgcgggcggtcacgaccgtcacgaacgccgac
ttcggcggcgtccacggccccgtgggcgaactcgcgtcggtgcccggcgagtatgcgacg
gcgtgtgagaccgcagcgggcggacggctcgcgaacgtcgtcgtcgacgacgacggcgtc
ggctccgactgcatcgactacctgaagcagcgcaacgcggggcgcgcgacgttcctcccg
atcacggagatggacgagcgcggactcccgtcgctgccgaacgaccccggcgtcgtcgac
ttcgcgcgcaacctcgtcgactacgaccccgagtacgaggggatcttctcgtacgtgctc
gggtcgacgctcgtcgtcgaggacatggacaccgcccggcacctgatgggcaactaccgg
atggtgacgctggacggcgacctcgtggagaagtccggcgcgatgaccggcggctccggc
ggcggctcccgatactccttctcgaagtccgggaaggggaagctggagcgcgtcgccgag
gagatccacgagctggaggacgagcgccagcggatcaaagccgagatcgccgacatcgac
gacgacctcgacgacgcccgctcgcgcgccgccgacgccgccgagaaggtccgggacatc
gagtccgacatcgagcgcgccgaggagacactcgaggagaaagagggccggatcggcgag
ttggaggagcgcctcgaggaactgcgcgaggagcgcgagtccgtcgacgcgaagatgacg
ggcctcgacgaggagatcgacgcggccgacgaggagatcgagacgatcgaggccgacatc
gaggagctggaatcggagcttgccgactccaagatcccggagctgtcggcgcgagccgac
gagatccgggcggagatcgacgacctcgaggaccggatggacgacctcgacggcgagttg
aaccagctccaactggagaagcagtacgcggaggacgccgtcgacgacctccacgacacc
gtcgaggaggcgcagtcgaagaaggcggacgccgaggaacggatcgacgagttcgaggag
cggatcgtcgagaaggaggcgacgctggaacagaagcgcgacgccatcgccgagctggag
gacgaactcgcggacctcaaggaggagcgcgaggccgtcaaagaatcgttccgcgaggcg
aagtccgcccgcgacgaacaggagtcgaaggtcgagcgcgtcgtctcgaagcttgagtcg
ctgcgcgagaccgcggagcggctggagtgggagatcgactcgttggaggagcaggtcggc
agctacgaccccgaggcgatcccggaccacgacaccgtcgagtccgagatcgaccggctc
caggcagagatggaggagttggagccggtgaacatgctcgcgatcgacgagtacgacgac
gtgcaggcggacttagacgacctgcaggagcgccgcgacgtactcgtcgaggagcgcgag
gcgatcgcggagcggatcgaccagttcgagtcccagaagcgggcgacgttcatggacgcc
ttcgaggccatcgacgagcagttcaccgagatctttcagcggctctcggccgggaccggc
gagttggtgctggaggaccccgaagatcccttcgagggcggcctgacgatgaaggcgcag
ccggcggacaagccggtccagcgcctcgacgcgatgtccggcggcgagaagtcgctgacg
gcgctggcgttcatcttcgcaatccagcggcacaaccccgcgcccttctacgcgctcgac
gaggtcgacgcgttcctcgacgcggtcaacgccgagcgcgtcggcgagatggtccacgac
ctcgcgggcgaggcgcagttcgtcgttgtcagccaccgctcggcgctgttggagcgctcc
gagcgcgccatcggcgtgacgatgcagtcggacaacgtctcggcggtgacggggatccaa
ctcggcgacaacggcgagccggtgccggaggtgcaggcggatgattga
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