Halobaculum rubrum: K6T25_03010
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Entry
K6T25_03010 CDS
T07963
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hrm
Halobaculum rubrum
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrm03400
]
K6T25_03010
DNA repair and recombination proteins [BR:
hrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K6T25_03010
Archaeal homologous recombinant proteins
K6T25_03010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_13
AAA_21
AAA_27
AAA_29
GAS
DUF1664
DUF724
FapA
ABC_tran
ZnF_RZ-type
DUF5700
Motif
Other DBs
NCBI-ProteinID:
QZY00092
LinkDB
All DBs
Position
complement(570178..572886)
Genome browser
AA seq
902 aa
AA seq
DB search
MIFDRLRLRNFKPYADTDLRLSDGVTVIHGLNGSGKSSLLEACFFALYGSKALDGTLADV
VTNGAEESEVELWFSHDGLSYHVRRELKRYGEQIQTTTCTLESDDESVHRDGATDVRAFV
SDLLRMDAEAFVNCAYVRQGEVNKLINATPTERQDMIDDLLQLGTLEEYRERAGDARLGV
EDVRSTTRGALESVEEQVAEKEDRDLHGRLNSLESTLAEVNEKIENYEAQREKAASTREN
ARDVLDEYEERREELTELESDIEDLEATIREDEAERERIGDRIADLRDRVDDAEATLEER
LSAVAVDDADPETLEARREQLDDREADLREELREARSEANALTNQSETLAETAEDAAERA
DEKRTRAAELDEDAEAAAETLAEREESLAELETEREELRATFEDAPVAVGEASAHRESVR
EELEAVRAEVRETSNEASAARSSVEEAEELLAAGKCPECGQPVDGSPHVDALDDEREHLE
ELEADLADLTERETDLEEKLDRAEELLEAESRLGQIGDTRELIEDGIEEKEAEIEQASER
AAELREAADDLESQATEKREVSDRKAEEAEDARADAAALEEDLDEIETARDRLDAVEATR
EEIVDADDEIERLTEKRADIADRNDERREFLATKRERRDELREAFDDERVESARERLENA
EEYIEKVDDALTDLRDRRDDLTSRIGAVENELEELEALRERRDALADRAAELDAIHEETR
DLEAMYGDLRAELRRANVESLERMLNETFELVYGNDAYSHIELDNEYELTVYQKDGEPLD
PEQLSGGERALFNLSLRCAIYRLLAEGIEGAAPTPPLILDEPTVFLDSGHVSRLTDLIDE
MRGFGVRQILIVSHDDELVGAADELVRVEKNPTSNRSTVERLADPSLSSVEIPSRDAEHA
DD
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
gtgatcttcgaccgcctccgcctgcggaacttcaagccgtacgccgacaccgacctccgc
ctctcggacggcgtgacggtcattcacgggctcaacggcagcggaaagtcctcgttgttg
gaggcgtgcttcttcgcgctgtacggctcgaaggcgctcgacggcacgctggcggacgtc
gtgaccaacggcgccgaggagagcgaggtcgaactgtggttcagccacgacggcctgtcg
taccacgtgcgccgggagctgaaacgctacggcgaacagatccagacgacgacgtgtacc
ctggaatcggacgacgagtcggtccaccgcgacggcgcgacggacgtgcgggcgttcgtc
tcggacctgctgcgcatggacgcggaggcgttcgtcaactgcgcgtacgtccgccagggc
gaggtgaacaagttgatcaacgccacgccgaccgagcgccaggacatgatcgacgacctc
ctccagctcggcacgctggaggagtaccgcgagcgcgccggcgacgcccgactcggcgtc
gaggacgtgcgctcgacgacgcggggcgcgctggagagcgtcgaggaacaggtggccgag
aaggaggaccgcgacctgcacggccgcctcaactcgctggagtcgacgctcgcggaggtg
aacgagaagatcgagaactacgaggcgcaacgcgagaaggcggcgtccacgcgcgagaac
gctcgtgacgtgctcgacgagtacgaggaacgccgcgaggagctgacggagctggagtcg
gacatcgaggacctggaggcgacgatccgcgaggacgaggccgaacgggagcggatcggc
gatcggatcgccgacctccgcgaccgcgtcgacgacgccgaggcgaccctcgaggaacgg
ctctcggcggtcgccgtcgacgacgccgacccggagacgctcgaggcgcgccgcgagcag
ctcgacgaccgcgaggccgacctccgcgaggagcttcgcgaggcgcgctcggaggcgaac
gccctcacgaaccagtcggagaccctcgcggagacggccgaggacgccgccgagcgcgcc
gacgagaagcgcactcgcgcggcggagctcgacgaggacgccgaggcggccgcggagacg
ctcgccgagcgcgaggagtcgctcgcggagctggagacggagcgcgaggagctccgtgcg
acgttcgaggacgcccccgtcgcggtcggcgaggcgtccgcccatcgcgagtccgtccga
gaggaactggaggcggtgcgcgcggaggtccgcgagacgagcaacgaggcgagcgccgcc
cggtcgagcgtcgaggaggcggaggagctgctggcggcggggaagtgtcccgagtgcggc
cagccggtcgacggctccccacacgtggacgccctcgacgacgagcgcgaacacctcgag
gagctggaggcggacctcgcggacctgaccgagcgcgagacggatctcgaggagaagctc
gaccgcgccgaggaactcctcgaggcggagagccggctcgggcagatcggggatacgcgg
gaactgatcgaggacggcatcgaggagaaggaggccgaaatagagcaggcgagcgagcgt
gccgccgaactgcgcgaggcggccgacgacctggagtcacaggcgaccgagaaacgcgag
gtcagcgatcggaaggccgaggaggccgaggacgcccgggcggacgcggcggcgctcgag
gaggacctcgacgagatcgagaccgctcgcgaccgactggacgccgtcgaggccacgcgc
gaggagatagtcgacgcggacgacgagatcgagcgcctgacggagaagcgtgcggacatc
gccgaccgcaacgacgagcgccgggagttcctcgcgacgaagcgcgagcgccgcgacgag
ctccgggaggcgttcgacgacgagcgcgtcgagtcggcccgcgaacggctcgagaacgcc
gaagagtacatcgagaaggtggacgacgcgctgaccgacctccgggaccgacgcgacgat
ctcacgagccggatcggcgccgtcgagaacgaactcgaggagctggaggcgctgcgcgag
cgccgcgacgcgctggcggatcgggccgcggagttggacgcgatccacgaggagacgcgg
gacctggaggcgatgtacggcgacctccgggcggagcttcggcgggcgaacgtggagagc
ctcgaacggatgctcaacgagacgttcgagctggtgtacggcaacgacgcctactcgcac
atcgagctggacaacgagtacgagctcaccgtctaccagaaggacggcgagccgctggac
cccgaacagctctcgggcggcgaacgcgcgctgttcaacctctcgttgcgctgtgcgatc
taccgcctgctcgcggaggggatcgagggcgcggcgccgacgccgccgctgattctcgac
gagccgacggtgttcctcgactcggggcatgtctcgcggctgacggacctgatcgacgag
atgcgcggcttcggcgtccgccagatcctgatcgtcagccacgacgacgaactcgtcggc
gccgcggacgagctcgtgcgcgtcgagaagaaccccacgtcgaaccggtcgacggtcgag
cggctggccgacccgtcgctgtcgtcggtcgagatcccgtcgcgcgacgccgagcacgcg
gacgactga
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