Halobaculum rubrum: K6T25_03175
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Entry
K6T25_03175 CDS
T07963
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K07730
putative transcriptional regulator
Organism
hrm
Halobaculum rubrum
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrm03000
]
K6T25_03175
Transcription factors [BR:
hrm03000
]
Prokaryotic type
Helix-turn-helix
Other families
K6T25_03175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
MarR_2
HTH_24
HTH_Crp_2
MarR
HVO_A0261_N
HTH_20
HTH_IclR
LexA_DNA_bind
HTH_5
HVO_A0114
WHD_RNase_R
DUF7343
HTH_27
TrmB
Fe_dep_repress
HTH_13
CggR_N
Rrf2
HTH_11
RepL
GntR
HTH_AsnC-type
HTH_Cmi2_C
HTH_10
Mrr_N
WHD_Rv2258c
DUF1967
Rio2_N
FaeA
Motif
Other DBs
NCBI-ProteinID:
QZY00122
LinkDB
All DBs
Position
606271..607152
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AA seq
293 aa
AA seq
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MSDDGTDGGADLGVLRHKRDATRYRILVEIAERQPAVSQREIADAIGVTAQAVSEHLGDL
AEGGFVDREGRGRYRVTKEGVDWLISRTDELSEYLDHVTSDVLGDVEVETALADGPVEEG
DRVGLSMRDGVLHAHSVAEGDGDDDAGAAVSGSDGTDRTDGATAVAVTAADTRQDVGVAE
FDGVVDYELGAVTAVVVPAVRDGGSRTVDPSRLRGFAADADLVVAAGTEAIAAVRRLDRE
PDVRFGTVDAVREAAMRGLDVLLVVAAGRLSAHTDGLRETAVGYEVVDTSRES
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgacggtacggacggcggggccgacctcggcgtcctccgacacaagcgcgac
gcgacgcggtatcggatcctcgtcgagatcgccgagcgtcagcccgcggtgagccagcgc
gagatcgccgacgccatcggggtcaccgcgcaggccgtctccgaacacctcggcgacctg
gcggagggcggcttcgtcgaccgcgaggggcgcggccgctaccgcgtcaccaaggagggc
gtcgactggctcatctcccgtaccgacgaactcagcgagtacctcgatcacgtcaccagc
gacgtgctcggcgacgtggaagtcgagaccgccctcgccgacggccccgtggaggagggc
gaccgcgtggggctgtcgatgcgcgacggcgtcctccacgcacacagcgtcgcggaggga
gacggagacgacgacgcgggggccgccgtctccggttccgacggcaccgaccgcaccgac
ggcgccaccgcggtcgcggtcacggcggccgacaccaggcaggacgtcggcgtcgcggag
ttcgacggcgtcgtcgactacgagttgggcgccgtcacggccgtcgtcgtcccggcggtc
cgcgacggcggaagccgcacggtcgacccgtcccgcctgcgcgggttcgcggccgacgcc
gacctcgtcgtcgccgccggaacggaggcgatcgccgccgtcagacggctcgaccgggag
ccggacgtgcgcttcggcacggtcgacgccgtccgcgaggccgccatgcgcgggctcgac
gtgctgctcgtcgtcgccgccggtcgactctccgcgcacaccgacggcctccgcgagacc
gccgtcggctacgaggtcgtcgacacgtcccgcgagtcgtga
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