Halobaculum rubrum: K6T25_04130
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Entry
K6T25_04130 CDS
T07963
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hrm
Halobaculum rubrum
Pathway
hrm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K6T25_04130 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrm03021
]
K6T25_04130 (rpoB)
Enzymes [BR:
hrm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K6T25_04130 (rpoB)
Transcription machinery [BR:
hrm03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
K6T25_04130 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
QZY00293
LinkDB
All DBs
Position
784672..786501
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AA seq
609 aa
AA seq
DB search
MASQQREAKVYVNGSLVGTHPDPTQLAAQIREARRRGDVSDMVNVSVKDRTNEVIVNADA
GRARRPLIVVENGEPLLDDETIEALEDGEIEFEDLVDHGIVEFIDAEEEEDIYVATDEED
VNSRTTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPSANYRIRPDTRQ
HLLHYPQLSMVKTQTTEQIGFDERPSAQNFVVAVMSYEGFNIEDALVMNKGSVDRAMQRS
HFFRTYEGEERRYPGGQEDRFEVPSQDVRGARGEDAYTHLDEDGLVNPETKVDENSVLLG
KTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGIVDTVTLMEGEDGSKLSKVSVRDER
IPELGDKFASRHGQKGVVGHLAPQEDMPFTEDGLVPDLVMNPHALPSRMTVGHVLEMLGG
KVGSLEGRRVDGTAFQGEDEDALRSSLEEHGYKSSGKEVMYSGVTGEKIEAEIFVGTIFY
HKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRVGEMEREVLIGHGAALALNERLL
DASDKETVYISEETGMVAVEDVEQRRIYDPITGDEDDIHEMEISYAFKLLLDEMKALGIR
PTLELEDAV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccaacaacgagaagcgaaagtctacgtcaacgggagcctggtcgggacccac
ccggatccgacccagctcgctgcacagatccgtgaggcgcgccgccgcggcgacgtctcc
gacatggtgaacgtctcggtgaaggaccgcaccaacgaggtcatcgtcaacgccgacgcc
ggccgcgctcggcggccgctcatcgtcgtggagaacggggagccgctcctcgacgacgag
acgatcgaggcgctggaggacggcgagatcgagttcgaggacctcgtcgaccacggcatc
gtcgagttcatcgacgccgaggaggaggaggacatctacgtcgccaccgacgaggaggac
gtcaactcgcggacgacgcacctggagatcgacccgcagctcatcttcggcatcggtgcg
gggatgatcccgtaccccgagcacaacgcctcgccgcgcattacaatgggcgcggggatg
atgaagcagtcgctcggactgccgtcggccaactaccgcatccggccggacacgcgccag
cacctgctccactacccgcagctgtcgatggtcaagacgcagaccaccgaacagatcggg
ttcgacgagcgtccctcggcgcagaacttcgtcgtcgcggtcatgtcctacgaggggttc
aacatcgaggacgcgctcgtcatgaacaaggggagcgtcgaccgcgcgatgcagcgctcg
cacttcttccggacctacgagggcgaggagcgccgctaccccggcggccaggaggaccgc
ttcgaggtcccctcccaggacgtgcgcggcgctcgaggcgaggacgcgtacacccacctc
gacgaggacggcctcgtcaaccccgagacgaaggtcgacgagaactccgtcctgctgggg
aagacgtcgccgccgcggttcctcgaggagcccgacgacatgggcgggctctccccacag
aagcggcgcgagaccagtgtcacgatgcgttcgggcgaatccggtatcgtcgacacggtc
acgctgatggagggcgaggacggctcgaagctctcgaaggtctcggtgcgcgacgagcgg
atccccgagctcggggacaagttcgcgtcccggcacggccagaagggcgtcgtggggcac
ctcgctccgcaagaagacatgccgttcaccgaggacgggctcgttcccgacctcgtgatg
aacccgcacgcgctcccgtcgcgcatgacggtgggccacgtgctggagatgctcggcggc
aaggtcggatcgctggagggacgccgcgtcgacggcacggcgttccagggtgaagacgag
gacgcgctccgctcgtcgctggaggagcacgggtacaagtcctcggggaaggaggtcatg
tactcgggcgtcaccggcgagaagatcgaggcggagatcttcgtcgggacgatcttctat
cacaagctgtaccacatggtgagcaacaagctgcacgcccgttcgcgcgggccggtgcag
gtgctcacccgccagccgaccgaggggcgcgcccgcgagggtggtctccgcgtcggcgag
atggagcgggaggtgctcatcggccacggcgccgcgctggcgctgaacgagcggctgctc
gacgcctccgacaaggagacggtgtacatctccgaggagacggggatggtggccgtcgag
gacgtggagcagcgtcggatctacgaccccatcacgggcgacgaggacgacatccacgag
atggagatcagctacgcgttcaagctgctgctcgacgagatgaaggcgctcggcattcga
ccgaccctcgaacttgaggacgcagtctaa
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