Halobaculum rubrum: K6T25_05630
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Entry
K6T25_05630 CDS
T07963
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hrm
Halobaculum rubrum
Pathway
hrm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T25_05630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrm03021
]
K6T25_05630
Transcription machinery [BR:
hrm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
K6T25_05630
Prokaryotic type
Archaeal type
TFB
K6T25_05630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QZY00561
LinkDB
All DBs
Position
complement(1067473..1068477)
Genome browser
AA seq
334 aa
AA seq
DB search
MSGPRQRDERERRQWTGDARAGESESTGADERTEDGDEVDVDDLDEEDLVRTADGELMHE
PTGLIVEEDHVDRGPEWRAFNHSERQSKSRVGAPVTETMHDKGLTTTIDWKDKDAYGRSL
SSEKRSQMHRLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPGSVREVASVIYRRAL
KEDLIRGRSIEGVATATLYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYVSQELGLEM
KPVDPKQYVPRFSSELDLSEEVKSKANEIIETTAEQGLLSGKSPTGFAAAAIYAASLLCN
EKKTQREVADVAQVTEVTIRNRYQEQIEAMGIHG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcccccgtcagcgagacgaacgcgagcgacggcagtggaccggcgacgcgcgc
gccggggagtccgagtcgaccggcgcggacgagcgaaccgaggacggcgacgaagtcgac
gtcgacgacctcgacgaggaggacctcgttcgcacggccgacggcgagttgatgcacgag
ccgacggggctcatcgtcgaggaggaccacgtcgaccgggggccggagtggcgggcgttc
aaccactccgagcggcagtcgaagtcgcgggtgggcgcgcccgtgaccgagaccatgcac
gataagggactgaccacgactatcgactggaaggacaaggacgcctacggccggagcctc
tcctcggaaaaacgctcccagatgcaccggctgcggaagtggcaggagcgcattcgcacc
aaggacgccggcgagcgcaacctccagttcgcgctctcggagatcgaccgcatggcctca
gcgctgggcgtccccggttcggtccgggaagtcgcctccgtcatctaccgccgcgcgctc
aaggaggacctcatccgcggccgctccatcgagggcgtcgccacggcgacgctgtacgcc
gcctgtcgaaaggagggtatcccccgctcgttggaggagatctccgaggtctcgcgcgtc
gagcgcaaggagatcggccggacgtaccgctacgtctcccaggaactcggactcgagatg
aagccggtcgaccccaagcagtacgttccccggttcagctcggaactcgacctcagcgag
gaggtcaaatcgaaggccaacgagatcatcgagacgaccgccgagcagggactgttgtcg
gggaaatcgcccaccggcttcgcggccgccgccatctacgcggcctccctcctgtgcaac
gagaagaagacccagcgcgaagtcgccgacgtcgcgcaggtcaccgaggtcaccatccgc
aaccgctatcaggaacagatcgaagcgatggggatccacggctga
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