Halobaculum rubrum: K6T25_05710
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Entry
K6T25_05710 CDS
T07963
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
hrm
Halobaculum rubrum
Pathway
hrm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
K6T25_05710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrm03021
]
K6T25_05710
03019 Messenger RNA biogenesis [BR:
hrm03019
]
K6T25_05710
Transcription machinery [BR:
hrm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
K6T25_05710
RNA polymerase I system
K6T25_05710
Messenger RNA biogenesis [BR:
hrm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
K6T25_05710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
DUF6093
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
QZY00576
LinkDB
All DBs
Position
complement(1079636..1080091)
Genome browser
AA seq
151 aa
AA seq
DB search
MPIYSVKTTASQERTVADMIASKEMAGIYAVLAPDQLTSYVMVEADGDAVIRRVLEEVPH
ARGLVEGPGGEAGRSSMSEVEHFLSPTPDVEGIAEGDIVELIAGPFKGEKAQVQRIDEGK
DQVTVELYEATVPIPVTVRGDQIRVLDSDER
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatctactcagtgaagacgacggccagccaggagcgaacggtcgccgacatgatc
gccagcaaggagatggccgggatctacgccgtgctcgcgcccgaccagctcaccagctac
gtgatggtcgaggccgacggcgacgccgtcatccggcgcgtgctggaggaagttccgcac
gcccgcgggctcgtcgagggccccggcggcgaggccggccgatcgtcgatgtcggaggtc
gagcacttcctctccccgacgcccgacgtggagggcatcgcggagggcgacatcgtcgag
ctgatcgccggtccgttcaaaggcgagaaggcgcaggtgcagcgcatcgacgagggcaaa
gatcaggtgaccgtcgaactgtacgaggcgaccgtcccgatcccggtgacggtgcggggc
gaccagatccgcgtgctcgactccgacgagcgatag
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