Halobaculum rubrum: K6T25_05935
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Entry
K6T25_05935 CDS
T07963
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
hrm
Halobaculum rubrum
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrm03019
]
K6T25_05935
Messenger RNA biogenesis [BR:
hrm03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
K6T25_05935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QZY00619
LinkDB
All DBs
Position
complement(1122240..1124282)
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AA seq
680 aa
AA seq
DB search
MSEQLPQVETLFLHERSDADEFTVVVERDGSRVLQGVLELKEADAGPRPRRFRVKRKGGE
EPRQPDQFVDLARNARRIRISEQTGAGARDRLVEMLDAYQLDAKQVRTCRYCANAGRYSP
VTADTAVKADRDFICPDCAKRELERELSYKGQFTGNAQERLEDLLFEVQDLERITNLLQG
NLDPDLTKFDTISATTDEIDPVPTSSLNLHPALQERVEGRFDELLPVQSLSVENGLFDGD
DQLVVSATATGKTLVGELAGVDNALNGKGKLLFLVPLVALANQKHEDFEERYGDVLDVTI
RVGASRINDDGTRFDPNADVIVGTYEGIDHALRTGKDMGDIGTVVIDEVHTLKEEGRGHR
LDGMISRLKHYSETRNSSAQWVYLSATVGNPEFLAERLRATLIEFEERPIPIERHVTFAD
EREKLEIEKKLVRREFDTKSSKGYRGQTIIFTNSRRRCHEISRKLEYDSAPYHAGLDYKR
RKTVERKFGDQELAAVVTTAALAAGVDFPASQVIFDTLAMGIEWLSVQEFEQMLGRAGRP
DYHDEGTVYVLVEPDASYHSSMEGTEDETAFKLLKGEMEDVTTVYDTTSAAEETLANVVV
AGKRAKKLNDRMIGEVPTTHAIGKLLEWEFIDGLSPTPLGRAVTEHFLAPDDAFRILDGI
RKDHHPYEIVADMELAEQEL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgagcaactcccgcaggtcgagaccctgttcctccacgagcgcagcgacgccgac
gagttcaccgtcgtcgtcgagcgcgacggctcgcgcgtcctccagggcgtcctcgaactc
aaggaggccgacgccggtccgcgcccgcgtcgcttccgcgtcaagcgaaagggcggcgag
gagccgcgccagcccgaccagttcgtcgatctggcgcgcaacgcgcgccgcatccgcatc
tccgagcagacgggggcgggcgcccgcgaccggctcgtcgagatgctcgacgcctaccag
ctcgacgccaagcaggtgcgcacctgccgctactgcgccaacgccgggcgctactcgccg
gtcactgccgacaccgcggtgaaggcggaccgcgacttcatctgtcccgactgcgcgaaa
cgggaactcgaacgcgagctctcctacaagggacagttcaccggcaacgcacaggagcgc
ctcgaggacctcctgttcgaggtgcaggacctggagcgcatcacgaacctcctgcaaggg
aacctcgaccccgacctcacgaagttcgacaccatctcggcgacgaccgacgagatcgac
cccgtccccacgagctcgctgaacctccaccccgcgctccaggagcgcgtcgagggccgg
ttcgacgaactgttgccggtgcagagcctctcggtcgagaacgggctgttcgacggggac
gaccagctcgtcgtgagcgcgacggcgaccgggaagacgctcgtgggcgaactcgccggc
gtcgacaacgcgctcaacgggaaggggaagctgctgtttctcgtcccgctggtcgcgctc
gcgaaccagaaacacgaggacttcgaggagcgctacggcgacgtgctcgacgtgaccatc
cgcgtgggcgcctcccggatcaacgacgacggcacccggttcgatccgaacgcggacgtg
atcgtcggcacttacgaggggatcgaccacgcgctgcgcaccggcaaggacatgggcgac
atcggcaccgtcgtcatcgacgaggtccacaccctgaaagaggagggccgcggccaccgc
ctcgacgggatgatctcgcggctcaaacactactccgagacccggaactcctcggcgcag
tgggtgtacctctcggcgaccgtcggcaaccccgagttcctcgccgagcgcctccgcgcg
acgctcatcgagttcgaggagcgcccgatccccatcgagcgccacgtcaccttcgccgac
gagcgcgagaagctggagatagaaaagaagctcgtcagacgcgagttcgacacgaagtcc
tcgaaggggtaccgggggcagacgatcatcttcaccaactcccgcagacgctgtcacgag
atctcccggaagctggagtacgactccgcgccgtatcacgccggcctcgactacaagcgc
cgcaagaccgtcgagcgcaaattcggggaccaggagctggcagcagttgtcactacggcc
gcgctcgcggccggcgtcgacttccccgcctcgcaggtgatcttcgacacgctcgcgatg
gggatcgagtggctctccgtgcaggagttcgagcagatgctcggccgtgcggggcgcccc
gactaccacgacgaggggacggtgtacgtgctcgtcgaacccgacgcgagctaccactcc
tcgatggagggcaccgaagacgagacggcgttcaagctcctgaagggtgagatggaggac
gtgacgacggtgtacgacacgacctccgccgccgaagagacgctcgcgaacgtcgtcgtc
gcgggcaagcgcgccaagaagctgaacgaccggatgatcggcgaggtccccaccacccac
gcgatcggcaagctactggagtgggagttcatcgacggcctgtcgccgacgccgctgggt
cgggcggtcaccgagcacttcctcgcccccgacgacgcgttccgcatcctcgacgggatc
cggaaggatcaccacccctacgagatcgtcgcggacatggaactcgcggagcaagagctg
tag
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