Halobaculum rubrum: K6T25_06270
Help
Entry
K6T25_06270 CDS
T07963
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hrm
Halobaculum rubrum
Pathway
hrm03022
Basal transcription factors
hrm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T25_06270
09124 Replication and repair
03420 Nucleotide excision repair
K6T25_06270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrm03021
]
K6T25_06270
03036 Chromosome and associated proteins [BR:
hrm03036
]
K6T25_06270
03400 DNA repair and recombination proteins [BR:
hrm03400
]
K6T25_06270
Enzymes [BR:
hrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K6T25_06270
Transcription machinery [BR:
hrm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K6T25_06270
Chromosome and associated proteins [BR:
hrm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
K6T25_06270
DNA repair and recombination proteins [BR:
hrm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K6T25_06270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
Zot
SLFN-g3_helicase
AAA_25
AAA_34
GvpD_P-loop
FliJ
nSTAND3
HBB
DUF7539
AAA_30
PhoH
AAA_11
PilJ
Motif
Other DBs
NCBI-ProteinID:
QZY00678
LinkDB
All DBs
Position
1184134..1186329
Genome browser
AA seq
731 aa
AA seq
DB search
MSTTDGYLRFFPYDEPYPNQEEAMDRISNSLERGQDVLFEGAPGTGKTLSALVPALQHAR
DHDRTVVITTNVHQQMRQFVEDARAINETEPIRATVFKGKSSMCHIDVDYQECQTLRDTT
RSLVEDRSDREQLEQRLDDLTDEMREGAEGTDESGSAGSAAEARQAVQEELERLDDEIDD
EAANTCDYYLQNLTGDTGEFFSWLFDDVRTPDEVYEYAGSRGFCGYELLKEGMEEVELVV
CNYHHLLDPQIREQFFRWLDRDPQDVITVFDEAHNVEDAARDHASKALTENTLESALTEL
EESDDSRAEPAENVLRAFIEALRDTYEDTLGFGAREGVGESWEDVSIANDDRRDDLTLAF
LERYEGSGIRAECDLALQLGKRLDEEYEEAYREGETTTRRECQTLQAAAFVSAWMDGGGE
LGQHPVVSVRRDAGTDEVYGRAELYTCIPREVTAELFDEVYASVLMSATLRPFDVTEDVL
GLSNPATLAYGLAYPEENRRTFSVATPALFASERDDPATQETIAATLSDVVRFTPGNSLL
FFPSYAEAERYHELLSGDPNLGTLLLDGSEPDTEQLRRRLVDGDSSTLFTSLWGTLAEGV
SFDGDDARTVAVVGVPYPHLSERMEAVQDAYDRAFAERSRDAGWEYAVEIPTVRKTRQAL
GRVIRSPDDFGVRALLDKRYTSADMGKYSVRDAFPPEEREELIDIGSEKLKFAMLNFFTD
HAAYDGSPPEP
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacgacggacggctacctgcgcttcttcccgtacgacgagccgtatccgaaccag
gaggaggcgatggaccggatctccaactcgctggagcgcgggcaggacgtgctgttcgag
ggcgcgcccgggaccggaaagacgctctcggcgctggtgcccgcgctgcagcacgcccgc
gatcacgaccgcaccgtcgtcatcacgacgaacgtccaccaacagatgcgacagttcgtc
gaggacgcccgcgcgatcaacgagacggagcctatccgcgcgacggtgttcaagggaaag
tcgtcgatgtgtcacatcgacgtggactaccaagagtgccagacgctccgagacaccacg
cgctcgctcgtcgaggaccggtccgacagagagcagttggagcagcggctggacgacctc
accgacgagatgcgcgagggcgcggagggcaccgacgagagcggcagtgccggaagcgcc
gccgaggccagacaggccgtccaagaggagttggagcgactcgacgacgagatcgacgac
gaggccgcgaacacctgcgactactacctccagaacctcaccggcgacacgggcgagttc
ttctcgtggctgttcgacgacgttcgaacccccgacgaggtgtacgagtacgccggcagc
cgcggcttctgtggctacgagctgctgaaggaggggatggaggaggtcgagctggtcgtc
tgcaactaccaccacctgctcgatccccagatcagagagcagttcttccgctggctcgac
cgcgacccgcaggacgtgatcaccgtcttcgacgaggcgcacaacgtcgaggacgccgcc
cgcgatcacgcctcgaaggcgctcaccgagaacacgttggagtcggcactcaccgagttg
gaggagagcgacgactcccgcgccgagcccgccgagaacgttctccgagcgttcatcgag
gcgctgcgcgacacctacgaggacaccctcggcttcggcgcgcgcgagggggtcggcgag
agctgggaggacgtgagcatcgcgaacgacgaccgccgcgacgacctcacgctcgcgttc
ctggagcgctacgaggggagcgggatccgggctgagtgcgacctcgcgctccagctcggc
aagcgcctggacgaggagtacgaggaggcgtaccgcgagggcgagaccaccacccgacgc
gagtgtcagaccctccaggccgccgcgttcgtgtcggcgtggatggacggcggcggcgag
ttgggccagcatccggtcgtctcggtgcgccgcgacgcgggcaccgacgaggtgtacggc
cgcgcggagctgtacacctgcatcccgcgggaggtgaccgcggagctgttcgacgaggtg
tacgcgagcgtcctcatgtccgcgaccctccgaccgttcgacgtgaccgaggacgtgctc
ggcctctcgaacccggcgacgctcgcgtacgggctggcgtaccccgaggagaaccgccgg
accttctcggtggcgacgcccgcgctgttcgcctccgagcgcgacgaccccgccacccag
gagacgatcgcggcgaccctgtcggatgtcgtacggttcacgcccggcaacagcctgctc
ttcttcccgtcgtacgccgaggccgagcgctaccacgagctcctctcgggcgacccgaac
ctcggcacgctcctgctcgacggctccgagcccgataccgagcaactgcgtcggcggctc
gtcgacggcgatagctcgaccctgttcacgtcgctgtggggcaccctcgcggagggcgtg
agcttcgacggcgacgacgcccggacggtcgcggtcgtcggcgtgccgtacccgcacctc
tccgagcggatggaggcggtgcaggacgcctacgaccgcgcgttcgccgagcgctcgcgc
gacgccggctgggagtacgccgtcgagatcccgacggtccgcaagacgcgacaggcgctc
gggcgggtcatccgctcgccggacgacttcggcgtgcgcgcgctgctggacaagcgctac
acgtccgccgacatggggaagtactccgttcgcgacgccttcccgccggaggagcgcgag
gagctgatcgacatcggttccgagaagctgaagttcgcgatgctgaacttctttaccgac
cacgcggcgtacgacgggtcgccgccggagccgtag
DBGET
integrated database retrieval system
