Halobaculum rubrum: K6T25_07195
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Entry
K6T25_07195 CDS
T07963
Name
(GenBank) endonuclease NucS
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hrm
Halobaculum rubrum
Brite
KEGG Orthology (KO) [BR:
hrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hrm03032
]
K6T25_07195
03400 DNA repair and recombination proteins [BR:
hrm03400
]
K6T25_07195
Enzymes [BR:
hrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K6T25_07195
DNA replication proteins [BR:
hrm03032
]
Prokaryotic type
DNA Topoisomerases
K6T25_07195
DNA repair and recombination proteins [BR:
hrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K6T25_07195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_Top1
NucS_N
Auto_anti-p27
DmmA-like_C
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QZY00835
LinkDB
All DBs
Position
1361131..1361907
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AA seq
258 aa
AA seq
DB search
MPATSTVLAGDCTTRFETTTGDTRTQRGRVVVLAKPDRTLLVHDRSGYQPVAWLTRPDSL
TVEADDDGFAVTAHDAGRTLSVRSHDAGEVVELPVGDAGVPVGECPDLDCGAALVRAGGD
VVCLGCDEGYGLPSGATVHDDDTCDDCGLPLMTVERGESLRLCIDYACDSMTDAVRETLD
RRFDCPDCDRDLRVREHRGRAFLGCDGYPDCETAFSVPAGVFAGECTCGLPRFETATGVR
CLDGTCELDRPADPDHNP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgacctccaccgtcctcgcgggcgactgcacgacgcggttcgagacgacgacc
ggcgacacgcgcacgcaacgggggcgcgtcgtcgtcctcgcgaaacccgaccgcacgctc
ttagtccacgaccgctcgggctaccagccggtcgcgtggctcacgcgccccgactcgctc
accgtcgaggccgacgacgacggcttcgccgtcaccgcccacgacgccggccgcaccctc
tcggtccgatcgcacgacgccggcgaggtggtggagctgccggtcggcgacgccggcgtc
cccgtcggcgagtgtcccgacctcgactgcggcgccgcgctggtccgcgccggcggcgac
gtggtctgtctcggctgcgacgaggggtacggactcccgtccggcgcgacggtccacgac
gacgacacctgcgacgactgcgggctcccgctgatgaccgtcgagcgcggcgagtcgctc
cgactgtgtatcgactacgcgtgcgactcgatgaccgacgccgtccgcgagacgctggat
cgtcggttcgactgcccggactgtgaccgggacctccgcgtccgggagcatcgcggccgg
gcgttcctcgggtgcgacggctatcccgactgcgagacggcgttctcggtgcccgcgggc
gtgttcgccggcgagtgtacctgcgggctcccgcgcttcgagaccgcgacgggggtgcgt
tgtctcgacggcacctgcgaactggaccggcctgccgacccggaccacaacccctga
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